BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0468200 Os07g0468200|AK103051
(83 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0468200 Hypothetical protein 165 6e-42
Os10g0329501 Hypothetical protein 152 6e-38
Os11g0601901 Hypothetical protein 150 2e-37
Os12g0293501 Conserved hypothetical protein 114 2e-26
Os01g0573200 Conserved hypothetical protein 81 1e-16
Os07g0267200 Conserved hypothetical protein 81 1e-16
Os12g0504950 Conserved hypothetical protein 75 8e-15
Os06g0291100 Hypothetical protein 69 8e-13
Os03g0555550 Conserved hypothetical protein 67 3e-12
Os06g0662550 Conserved hypothetical protein 64 2e-11
>Os07g0468200 Hypothetical protein
Length = 83
Score = 165 bits (418), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 83/83 (100%), Positives = 83/83 (100%)
Query: 1 IYICLFQIFSFTPKYPLATKKPPVGTLRLPWGRLRSIGPNVEPLVVKPSKTKPKVEVLLL 60
IYICLFQIFSFTPKYPLATKKPPVGTLRLPWGRLRSIGPNVEPLVVKPSKTKPKVEVLLL
Sbjct: 1 IYICLFQIFSFTPKYPLATKKPPVGTLRLPWGRLRSIGPNVEPLVVKPSKTKPKVEVLLL 60
Query: 61 APHALMRTTVGASLFPRPPQHAS 83
APHALMRTTVGASLFPRPPQHAS
Sbjct: 61 APHALMRTTVGASLFPRPPQHAS 83
>Os10g0329501 Hypothetical protein
Length = 83
Score = 152 bits (384), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 76/78 (97%), Positives = 77/78 (98%)
Query: 1 IYICLFQIFSFTPKYPLATKKPPVGTLRLPWGRLRSIGPNVEPLVVKPSKTKPKVEVLLL 60
IYICLFQIFSFTPKYPLATKKPPVGTLRLPWGRLRSIGP+VEPLVVKP KTKPKVEVLLL
Sbjct: 1 IYICLFQIFSFTPKYPLATKKPPVGTLRLPWGRLRSIGPDVEPLVVKPGKTKPKVEVLLL 60
Query: 61 APHALMRTTVGASLFPRP 78
APHALMRTTVGASLFPRP
Sbjct: 61 APHALMRTTVGASLFPRP 78
>Os11g0601901 Hypothetical protein
Length = 109
Score = 150 bits (379), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/82 (92%), Positives = 76/82 (92%)
Query: 1 IYICLFQIFSFTPKYPLATKKPPVGTLRLPWGRLRSIGPNVEPLVVKPSKTKPKVEVLLL 60
IYICLFQIFSFTPKYPLATKKPPVGTL LPWGRLRSIGPNVEPLVV P KTKPKVEVLL
Sbjct: 1 IYICLFQIFSFTPKYPLATKKPPVGTLCLPWGRLRSIGPNVEPLVVNPGKTKPKVEVLLP 60
Query: 61 APHALMRTTVGASLFPRPPQHA 82
A HALMRT VGASLFPRPPQHA
Sbjct: 61 ASHALMRTMVGASLFPRPPQHA 82
>Os12g0293501 Conserved hypothetical protein
Length = 133
Score = 114 bits (284), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 63/78 (80%)
Query: 6 FQIFSFTPKYPLATKKPPVGTLRLPWGRLRSIGPNVEPLVVKPSKTKPKVEVLLLAPHAL 65
FQIF F P+Y LATKKPPVGTLRLPWGR R +V LVVKP KTKPKVEVLLLAPHA
Sbjct: 30 FQIFLFNPEYSLATKKPPVGTLRLPWGRSRFTILDVRLLVVKPGKTKPKVEVLLLAPHAS 89
Query: 66 MRTTVGASLFPRPPQHAS 83
MR +G SLFPRPPQ+A+
Sbjct: 90 MRIVLGVSLFPRPPQNAA 107
>Os01g0573200 Conserved hypothetical protein
Length = 110
Score = 81.3 bits (199), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/51 (76%), Positives = 44/51 (86%)
Query: 6 FQIFSFTPKYPLATKKPPVGTLRLPWGRLRSIGPNVEPLVVKPSKTKPKVE 56
FQI FTPKYPLA+KKPPVGTLRL W RLRSIGP+VEPLVVKP KT+ + +
Sbjct: 5 FQISPFTPKYPLASKKPPVGTLRLSWRRLRSIGPDVEPLVVKPGKTQTQGQ 55
>Os07g0267200 Conserved hypothetical protein
Length = 80
Score = 81.3 bits (199), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/50 (82%), Positives = 44/50 (88%)
Query: 34 LRSIGPNVEPLVVKPSKTKPKVEVLLLAPHALMRTTVGASLFPRPPQHAS 83
+RSI P+V PLVVKP KTKPKVEVLLLAPHALMR VGASLFPRP QHA+
Sbjct: 5 VRSIDPDVGPLVVKPGKTKPKVEVLLLAPHALMRIVVGASLFPRPLQHAA 54
>Os12g0504950 Conserved hypothetical protein
Length = 152
Score = 75.5 bits (184), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 43/53 (81%), Gaps = 1/53 (1%)
Query: 1 IYICL-FQIFSFTPKYPLATKKPPVGTLRLPWGRLRSIGPNVEPLVVKPSKTK 52
+ +CL FQIF F PKYPLATKKPPVGTLRLPWGR R P+V PLVV+P KT+
Sbjct: 24 LNLCLSFQIFLFNPKYPLATKKPPVGTLRLPWGRSRFTIPDVGPLVVEPGKTQ 76
>Os06g0291100 Hypothetical protein
Length = 90
Score = 68.9 bits (167), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/44 (79%), Positives = 38/44 (86%)
Query: 40 NVEPLVVKPSKTKPKVEVLLLAPHALMRTTVGASLFPRPPQHAS 83
+V LVVKP KTKPKVEVLLLAPHA MRT VGASLFPRPPQ+ +
Sbjct: 21 DVGLLVVKPGKTKPKVEVLLLAPHASMRTAVGASLFPRPPQYVA 64
>Os03g0555550 Conserved hypothetical protein
Length = 143
Score = 67.0 bits (162), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 37/49 (75%)
Query: 6 FQIFSFTPKYPLATKKPPVGTLRLPWGRLRSIGPNVEPLVVKPSKTKPK 54
+QIFSF P YPL TK+PPV TLRLPWG R P+VEPLVVK KT+ +
Sbjct: 40 YQIFSFIPNYPLTTKEPPVRTLRLPWGHSRFTIPDVEPLVVKSGKTQTQ 88
>Os06g0662550 Conserved hypothetical protein
Length = 129
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 35/46 (76%)
Query: 3 ICLFQIFSFTPKYPLATKKPPVGTLRLPWGRLRSIGPNVEPLVVKP 48
I FQIF F P LATKKPPVGTLRLPWGR R P+VEPLVVKP
Sbjct: 4 IFAFQIFYFIPITLLATKKPPVGTLRLPWGRSRFSIPDVEPLVVKP 49
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.140 0.443
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,196,925
Number of extensions: 113272
Number of successful extensions: 295
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 295
Number of HSP's successfully gapped: 10
Length of query: 83
Length of database: 17,035,801
Length adjustment: 53
Effective length of query: 30
Effective length of database: 14,268,459
Effective search space: 428053770
Effective search space used: 428053770
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 149 (62.0 bits)