Os06g0291100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os06g0291100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 776.23 | 1.31 | 9.63 | -4.57 | 1.54 | -4.43 | 3.17 | -4.24 | -0.701 | 10.7 | 73 | 1233 | -- | -- |
| 810.14 | 1.33 | 9.73 | -5.17 | 1.57 | -4.49 | 2.51 | -- | -0.911 | 10.7 | 71.27 | 1227 | -- | -- |
| 813.65 | 1.33 | 9.65 | -4.57 | 1.47 | -4.43 | -- | -3.27 | -0.728 | 11.2 | 72.93 | 1243 | -- | -- |
| 835.35 | 1.35 | 9.71 | -5.02 | 1.55 | -4.58 | -- | -- | -0.854 | 11.1 | 73 | 1233 | -- | -- |
| 866.12 | 1.37 | 9.69 | -4.41 | -- | -4.03 | -- | -3.79 | -0.654 | -- | 72.4 | 1450 | -- | -- |
| 1531 | 1.83 | 9.59 | -4.28 | 0.742 | -- | 2.99 | -- | -0.285 | 8.04 | -- | -- | -- | -- |
| 1557.12 | 1.85 | 9.59 | -4.19 | 0.738 | -- | -- | -- | -0.285 | 8.59 | -- | -- | -- | -- |
| 900.96 | 1.4 | 9.74 | -5 | -- | -4.32 | -- | -- | -0.838 | -- | 72.72 | 1443 | -- | -- |
| 1408.65 | 1.75 | 9.63 | -- | 1.53 | -5.49 | -- | -- | -0.395 | 10.8 | 75.03 | 2606 | -- | -- |
| 1587.78 | 1.86 | 9.61 | -4.19 | -- | -- | -- | -- | -0.278 | -- | -- | -- | -- | -- |
| 2020.04 | 2.1 | 9.49 | -- | 0.729 | -- | -- | -- | 0.182 | 9.02 | -- | -- | -- | -- |
| 1476.43 | 1.79 | 9.65 | -- | -- | -5.05 | -- | -- | -0.446 | -- | 75.82 | 2827 | -- | -- |
| 2050.55 | 2.11 | 9.51 | -- | -- | -- | -- | -- | 0.186 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 813.04 | humidity | 60 | 1440 | > th | dose dependent | rect. | 5 | 18 |
| 36 | 822.68 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 20 |
| 90 | 828.64 | humidity | 50 | 1440 | > th | dose dependent | rect. | 16 | 23 |
| 93 | 828.81 | humidity | 60 | 1440 | > th | dose dependent | sin | 1 | NA |
| 94 | 829.02 | humidity | 70 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 117 | 830.72 | humidity | 50 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 119 | 831.25 | humidity | 50 | 1440 | > th | dose dependent | no | NA | NA |
| 123 | 831.67 | humidity | 90 | 1440 | < th | dose dependent | rect. | 16 | 22 |
| 135 | 832.88 | humidity | 70 | 1440 | > th | dose independent | rect. | 8 | 19 |
| 137 | 832.95 | humidity | 70 | 1440 | > th | dose independent | rect. | 8 | 17 |
| 154 | 833.20 | humidity | 70 | 1440 | > th | dose independent | rect. | 8 | 13 |
| 169 | 833.71 | humidity | 50 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 180 | 834.73 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 213 | 836.78 | humidity | 70 | 1440 | > th | dose independent | rect. | 2 | 23 |
| 218 | 836.82 | humidity | 70 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 220 | 836.83 | humidity | 70 | 1440 | > th | dose independent | rect. | 24 | 23 |
| 221 | 836.84 | humidity | 70 | 1440 | > th | dose independent | no | NA | NA |
| 224 | 836.85 | humidity | 70 | 1440 | > th | dose independent | rect. | 24 | 21 |
| 251 | 837.04 | humidity | 70 | 1440 | > th | dose independent | rect. | 2 | 19 |
| 277 | 837.82 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 15 |
| 278 | 837.90 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 9 |
| 296 | 839.06 | humidity | 90 | 1440 | < th | dose dependent | rect. | 3 | 20 |
| 376 | 844.40 | humidity | 60 | 1440 | > th | dose dependent | rect. | 6 | 9 |
| 387 | 844.89 | humidity | 80 | 1440 | < th | dose independent | sin | 2 | NA |
| 391 | 845.12 | humidity | 90 | 1440 | < th | dose dependent | no | NA | NA |
| 400 | 845.61 | humidity | 70 | 1440 | < th | dose independent | rect. | 14 | 22 |
| 411 | 846.18 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 437 | 847.74 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 466 | 849.22 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 9 |
| 490 | 850.40 | humidity | 70 | 1440 | < th | dose independent | rect. | 9 | 11 |
| 506 | 850.55 | humidity | 70 | 1440 | > th | dose independent | sin | 21 | NA |
| 526 | 852.09 | humidity | 70 | 1440 | < th | dose independent | rect. | 17 | 23 |
| 578 | 853.94 | humidity | 80 | 1440 | > th | dose independent | sin | 1 | NA |
| 694 | 859.42 | humidity | 70 | 1440 | < th | dose independent | no | NA | NA |
| 880 | 866.92 | humidity | 70 | 1440 | < th | dose independent | sin | 20 | NA |
| 921 | 869.75 | humidity | 90 | 1440 | < th | dose dependent | sin | 1 | NA |