BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0419500 Os07g0419500|J065215N23
         (60 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os07g0419500  Glycosyl transferase, family 28 domain contain...   123   3e-29
Os04g0131900  Similar to UDP-glucose:sterol glucosyltransfer...    78   1e-15
Os01g0867600  Similar to UDP-glucose:sterol glucosyltransfer...    67   4e-12

>Os07g0419500 Glycosyl transferase, family 28 domain containing protein
          Length = 60

 Score =  123 bits (309), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 60/60 (100%), Positives = 60/60 (100%)

Query: 1  QLLLLQIYGHRVRLATHANFKDFVVTAGLEFYPLGGDPKLLAGCMLNIVLKSIFQFIEPV 60
          QLLLLQIYGHRVRLATHANFKDFVVTAGLEFYPLGGDPKLLAGCMLNIVLKSIFQFIEPV
Sbjct: 1  QLLLLQIYGHRVRLATHANFKDFVVTAGLEFYPLGGDPKLLAGCMLNIVLKSIFQFIEPV 60



>Os04g0131900 Similar to UDP-glucose:sterol glucosyltransferase (EC 2.4.1.173)
          Length = 609

 Score = 78.2 bits (191), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/42 (80%), Positives = 39/42 (92%)

Query: 5   LQIYGHRVRLATHANFKDFVVTAGLEFYPLGGDPKLLAGCML 46
           LQ YGHRVRLATHANFK+FV+TAGLEF+PLGGDPK+LA  M+
Sbjct: 186 LQDYGHRVRLATHANFKEFVLTAGLEFFPLGGDPKILAEYMV 227



>Os01g0867600 Similar to UDP-glucose:sterol glucosyltransferase (EC 2.4.1.173)
          Length = 620

 Score = 66.6 bits (161), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 28/41 (68%), Positives = 35/41 (85%)

Query: 5   LQIYGHRVRLATHANFKDFVVTAGLEFYPLGGDPKLLAGCM 45
           LQ +GH VRLATHANF+ FV +AG++FYPLGGDP++LA  M
Sbjct: 190 LQEFGHYVRLATHANFRTFVKSAGIDFYPLGGDPRILAQYM 230



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.331    0.149    0.453 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 1,894,723
Number of extensions: 53009
Number of successful extensions: 79
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 79
Number of HSP's successfully gapped: 3
Length of query: 60
Length of database: 17,035,801
Length adjustment: 32
Effective length of query: 28
Effective length of database: 15,364,953
Effective search space: 430218684
Effective search space used: 430218684
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 149 (62.0 bits)