Os04g0131900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to UDP-glucose:sterol glucosyltransferase (EC 2.4.1.173).
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Os04g0131900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to UDP-glucose:sterol glucosyltransferase (EC 2.4.1.173).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10.18 | 0.15 | 11.5 | -0.581 | 0.529 | 0.044 | 0.211 | -0.777 | -0.116 | 22.8 | 19.8 | 2798 | -- | -- |
| 10.59 | 0.152 | 11.5 | -0.532 | 0.531 | 0.248 | 0.218 | -- | -0.0916 | 22.9 | 10.3 | 47520 | -- | -- |
| 10.34 | 0.15 | 11.5 | -0.584 | 0.531 | 0.0368 | -- | -0.804 | -0.112 | 22.8 | 19.44 | 2893 | -- | -- |
| 10.76 | 0.153 | 11.5 | -0.543 | 0.529 | 0.251 | -- | -- | -0.0923 | 22.9 | 10.34 | 47520 | -- | -- |
| 27.34 | 0.244 | 11.5 | -0.576 | -- | 0.0939 | -- | -0.675 | -0.11 | -- | 19.08 | 2383 | -- | -- |
| 11.77 | 0.161 | 11.5 | -0.364 | 0.531 | -- | 0.208 | -- | -0.0454 | 22.9 | -- | -- | -- | -- |
| 11.95 | 0.162 | 11.5 | -0.372 | 0.53 | -- | -- | -- | -0.0461 | 22.9 | -- | -- | -- | -- |
| 26.92 | 0.242 | 11.5 | -0.486 | -- | 0.334 | -- | -- | -0.103 | -- | 19.54 | 821 | -- | -- |
| 12.77 | 0.166 | 11.5 | -- | 0.529 | -0.28 | -- | -- | 0.0776 | 23 | 21.6 | 47520 | -- | -- |
| 29.35 | 0.253 | 11.5 | -0.361 | -- | -- | -- | -- | -0.0426 | -- | -- | -- | -- | -- |
| 15.6 | 0.185 | 11.5 | -- | 0.527 | -- | -- | -- | -0.00466 | 22.8 | -- | -- | -- | -- |
| 29.51 | 0.254 | 11.5 | -- | -- | -0.187 | -- | -- | 0.0193 | -- | 26.96 | 47520 | -- | -- |
| 32.78 | 0.267 | 11.5 | -- | -- | -- | -- | -- | -0.00252 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 9.61 | temperature | 20.0 | 90 | > th | dose independent | rect. | 8 | 21 |
| 7 | 9.81 | temperature | 20.0 | 90 | > th | dose independent | rect. | 18 | 11 |
| 15 | 9.89 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 16 | 9.90 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 5 |
| 17 | 9.90 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 5 |
| 19 | 9.90 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 5 |
| 20 | 9.90 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 5 |
| 22 | 9.91 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 23 | 9.92 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 1 | 7 |
| 24 | 9.92 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 26 | 9.92 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 1 | 7 |
| 38 | 9.94 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 8 | 21 |
| 103 | 10.01 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 126 | 10.03 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 127 | 10.03 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 130 | 10.03 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 11 | 8 |
| 138 | 10.03 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 141 | 10.04 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 144 | 10.04 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 169 | 10.05 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 22 | 2 |
| 172 | 10.05 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 13 | 4 |
| 182 | 10.05 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 11 | 8 |
| 205 | 10.06 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 13 | 4 |
| 240 | 10.07 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 262 | 10.07 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 268 | 10.08 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 283 | 10.08 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 3 | 5 |
| 300 | 10.08 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 22 | 10 |
| 323 | 10.08 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 6 | 7 |
| 332 | 10.09 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 337 | 10.09 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 338 | 10.09 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 22 | 3 |
| 380 | 10.10 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 6 | 3 |
| 382 | 10.10 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 6 | 3 |
| 397 | 10.10 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 23 | 9 |
| 402 | 10.10 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 22 | 11 |
| 406 | 10.10 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 4 | 11 |
| 407 | 10.10 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 4 | 11 |
| 449 | 10.10 | radiation | 10.0 | 90 | < th | dose independent | rect. | 9 | 20 |
| 454 | 10.10 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 455 | 10.10 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 458 | 10.10 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 17 | 9 |
| 462 | 10.10 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 11 |
| 463 | 10.11 | atmosphere | 995.0 | 43200 | > th | dose independent | sin | 22 | NA |
| 473 | 10.11 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 11 | 4 |
| 478 | 10.11 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 1 | 7 |
| 479 | 10.11 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 1 | 7 |
| 480 | 10.11 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 6 | 7 |
| 487 | 10.11 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 23 | 9 |
| 492 | 10.11 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 4 | 9 |
| 493 | 10.11 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 4 | 9 |
| 581 | 10.11 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 582 | 10.11 | atmosphere | 1010.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 586 | 10.11 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 9 |
| 605 | 10.11 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 17 |
| 611 | 10.11 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 6 | 19 |
| 622 | 10.12 | temperature | 20.0 | 1440 | > th | dose independent | sin | 8 | NA |
| 623 | 10.12 | temperature | 20.0 | 1440 | < th | dose independent | sin | 8 | NA |
| 625 | 10.12 | atmosphere | 995.0 | 43200 | < th | dose independent | sin | 22 | NA |
| 626 | 10.12 | radiation | 1.0 | 43200 | > th | dose independent | sin | 4 | NA |
| 627 | 10.12 | radiation | 1.0 | 43200 | < th | dose independent | sin | 3 | NA |
| 629 | 10.12 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 667 | 10.12 | wind | 3.0 | 43200 | > th | dose independent | rect. | 14 | 12 |
| 675 | 10.12 | wind | 3.0 | 43200 | < th | dose independent | rect. | 13 | 13 |
| 694 | 10.12 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 696 | 10.12 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 715 | 10.12 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 7 |
| 720 | 10.12 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 10 |
| 725 | 10.12 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 12 |
| 732 | 10.12 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 21 | 14 |
| 760 | 10.13 | radiation | 1.0 | 43200 | > th | dose independent | sin | 2 | NA |
| 765 | 10.13 | atmosphere | 1015.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 766 | 10.13 | atmosphere | 1015.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 768 | 10.13 | atmosphere | 1015.0 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 794 | 10.13 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 6 | 8 |
| 799 | 10.13 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 3 | 9 |
| 822 | 10.13 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 1 | 13 |
| 825 | 10.13 | atmosphere | 995.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 826 | 10.13 | radiation | 1.0 | 43200 | < th | dose dependent | sin | 3 | NA |
| 831 | 10.13 | atmosphere | 1010.0 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 946 | 10.13 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 7 | 11 |
| 951 | 10.13 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 23 | 12 |
| 976 | 10.14 | wind | 1.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 977 | 10.14 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 981 | 10.14 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 989 | 10.14 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 5 | 4 |
| 1000 | 10.14 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 4 | 7 |