BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0417800 Os07g0417800|AK120134
(246 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0417800 Conserved hypothetical protein 478 e-135
Os02g0450600 273 1e-73
Os09g0475300 266 1e-71
Os10g0174700 260 6e-70
Os09g0555000 254 4e-68
Os06g0715900 252 2e-67
Os10g0523300 249 2e-66
Os01g0218300 248 2e-66
Os11g0602000 248 3e-66
Os09g0477000 247 4e-66
Os07g0160166 247 6e-66
Os04g0363800 247 7e-66
Os12g0268200 246 8e-66
Os11g0291200 246 2e-65
Os04g0186333 244 3e-65
Os06g0715800 240 6e-64
Os07g0511200 238 2e-63
Os12g0156200 Similar to DNA-binding factor of bZIP class 237 5e-63
Os06g0481300 236 8e-63
Os06g0472800 210 7e-55
Os11g0106066 RNA-directed DNA polymerase (Reverse transcrip... 209 2e-54
Os02g0288950 204 7e-53
Os11g0437700 177 6e-45
Os05g0155900 153 9e-38
Os11g0263800 148 3e-36
Os01g0177866 143 1e-34
Os11g0501300 135 4e-32
Os04g0470900 124 6e-29
Os09g0107880 123 1e-28
Os06g0609100 123 2e-28
Os01g0559400 108 3e-24
Os05g0331600 84 1e-16
Os01g0521000 81 6e-16
Os10g0362600 71 8e-13
>Os07g0417800 Conserved hypothetical protein
Length = 246
Score = 478 bits (1231), Expect = e-135, Method: Compositional matrix adjust.
Identities = 232/246 (94%), Positives = 232/246 (94%)
Query: 1 RNIEDEEIKQDGIWTVLARFYSLRNPNQTALFEDMSRAWRLRSDMTHKSLRDNLFIITFS 60
RNIEDEEIKQDGIWTVLARFYSLRNPNQTALFEDMSRAWRLRSDMTHKSLRDNLFIITFS
Sbjct: 1 RNIEDEEIKQDGIWTVLARFYSLRNPNQTALFEDMSRAWRLRSDMTHKSLRDNLFIITFS 60
Query: 61 TEGDYKFVLQGGPWLHKGDALLVAAFDGLTCPSKIPLETVPIWIRIYDLPLVLMTKARGQ 120
TEGDYKFVLQGGPWLHKGDALLVAAFDGLTCPSKIPLETVPIWIRIYDLPLVLMTKARGQ
Sbjct: 61 TEGDYKFVLQGGPWLHKGDALLVAAFDGLTCPSKIPLETVPIWIRIYDLPLVLMTKARGQ 120
Query: 121 LYGSRFGCVREVDVEEDGRNRHDFFRIRVDXXXXXXXXXXXXXXMHVQGKEETSLGSGWT 180
LYGSRFGCVREVDVEEDGRNRHDFFRIRVD MHVQGKEETSLGSGWT
Sbjct: 121 LYGSRFGCVREVDVEEDGRNRHDFFRIRVDLPVKKPLKPKIAIKMHVQGKEETSLGSGWT 180
Query: 181 CLSRNPRNQRLQLKCMFKARRRLRDLMFAMKGSHTSALCVGISATQIRNVIRRVQIMRYR 240
CLSRNPRNQRLQLKCMFKARRRLRDLMFAMKGSHTSALCVGISATQIRNVIRRVQIMRYR
Sbjct: 181 CLSRNPRNQRLQLKCMFKARRRLRDLMFAMKGSHTSALCVGISATQIRNVIRRVQIMRYR 240
Query: 241 SNSRLN 246
SNSRLN
Sbjct: 241 SNSRLN 246
>Os02g0450600
Length = 692
Score = 273 bits (697), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 133/172 (77%), Positives = 141/172 (81%)
Query: 2 NIEDEEIKQDGIWTVLARFYSLRNPNQTALFEDMSRAWRLRSDMTHKSLRDNLFIITFST 61
+IE+EE+KQ G TVLARFYSLR PN +ALFEDM RAWRLRSDM++KSLRDNLFIITF
Sbjct: 269 DIEEEEMKQVGQLTVLARFYSLRTPNLSALFEDMGRAWRLRSDMSYKSLRDNLFIITFGA 328
Query: 62 EGDYKFVLQGGPWLHKGDALLVAAFDGLTCPSKIPLETVPIWIRIYDLPLVLMTKARGQL 121
EGDY FVLQGG WLHKGDALLVAAFDGLTCPSKIPLE VPIWIRIYDLPLVLMTKARG+L
Sbjct: 329 EGDYNFVLQGGRWLHKGDALLVAAFDGLTCPSKIPLEVVPIWIRIYDLPLVLMTKARGEL 388
Query: 122 YGSRFGCVREVDVEEDGRNRHDFFRIRVDXXXXXXXXXXXXXXMHVQGKEET 173
YGS+FG VREVDVE DGRNRHDFFRIRVD VQG E T
Sbjct: 389 YGSKFGQVREVDVEADGRNRHDFFRIRVDLLVKKPLKSKIAIKNKVQGNEVT 440
>Os09g0475300
Length = 1861
Score = 266 bits (680), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 127/170 (74%), Positives = 138/170 (81%)
Query: 3 IEDEEIKQDGIWTVLARFYSLRNPNQTALFEDMSRAWRLRSDMTHKSLRDNLFIITFSTE 62
I++EEIK WTVLARFYS+R PNQ ALFEDMSRAWRLRSDM +KSLRDNLFII FS E
Sbjct: 193 IDEEEIKNTDKWTVLARFYSIRTPNQVALFEDMSRAWRLRSDMNYKSLRDNLFIIAFSNE 252
Query: 63 GDYKFVLQGGPWLHKGDALLVAAFDGLTCPSKIPLETVPIWIRIYDLPLVLMTKARGQLY 122
GD+KFV QGGPWLH+GDALLVA F+GLT PS IPLE VPIWIRIYDLPLVLMTKARG+LY
Sbjct: 253 GDFKFVTQGGPWLHRGDALLVAEFNGLTSPSNIPLEVVPIWIRIYDLPLVLMTKARGELY 312
Query: 123 GSRFGCVREVDVEEDGRNRHDFFRIRVDXXXXXXXXXXXXXXMHVQGKEE 172
GS+FG VREVDVE DGRNRHDFFRIRVD ++V G EE
Sbjct: 313 GSKFGRVREVDVEADGRNRHDFFRIRVDLPVTKPLKSKIAIRINVHGSEE 362
>Os10g0174700
Length = 1888
Score = 260 bits (665), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 115/170 (67%), Positives = 141/170 (82%)
Query: 2 NIEDEEIKQDGIWTVLARFYSLRNPNQTALFEDMSRAWRLRSDMTHKSLRDNLFIITFST 61
NIED+E++ G+WT+LARFYSLR PNQ ALF+DM RAWRLR+D+++KSLRDN+FIITFS
Sbjct: 233 NIEDDELQTAGLWTILARFYSLRTPNQVALFDDMRRAWRLRADISYKSLRDNMFIITFSA 292
Query: 62 EGDYKFVLQGGPWLHKGDALLVAAFDGLTCPSKIPLETVPIWIRIYDLPLVLMTKARGQL 121
EGDY FV++GGPW+H+GDALLVA+FDG+TCPS +PL+ VPIW+RIYDLPLVLMTK RG++
Sbjct: 293 EGDYDFVIKGGPWIHRGDALLVASFDGITCPSNVPLDVVPIWVRIYDLPLVLMTKVRGEM 352
Query: 122 YGSRFGCVREVDVEEDGRNRHDFFRIRVDXXXXXXXXXXXXXXMHVQGKE 171
+GS+ G VREVDV +DGRN+HDFF IRVD M VQGKE
Sbjct: 353 FGSKLGKVREVDVGDDGRNKHDFFHIRVDLPVKRPLKSQIAIRMTVQGKE 402
>Os09g0555000
Length = 1240
Score = 254 bits (649), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 116/171 (67%), Positives = 139/171 (81%)
Query: 2 NIEDEEIKQDGIWTVLARFYSLRNPNQTALFEDMSRAWRLRSDMTHKSLRDNLFIITFST 61
++E+EE++ G WT+LARFYS+R PN ALF+DM RAW+LR+DM++KSLR+N+FIITFS+
Sbjct: 153 SLEEEEVQIAGQWTILARFYSMRLPNHQALFDDMCRAWQLRADMSYKSLRENMFIITFSS 212
Query: 62 EGDYKFVLQGGPWLHKGDALLVAAFDGLTCPSKIPLETVPIWIRIYDLPLVLMTKARGQL 121
EGDYKFVLQGGPW+H GDALLVA FDG+TCPSK+PLE+VPIW+RIYDLPL LMTK RG+L
Sbjct: 213 EGDYKFVLQGGPWIHHGDALLVAEFDGITCPSKVPLESVPIWVRIYDLPLALMTKQRGEL 272
Query: 122 YGSRFGCVREVDVEEDGRNRHDFFRIRVDXXXXXXXXXXXXXXMHVQGKEE 172
YGSR G V EVDV +DGRN HDFF IRVD + VQGKEE
Sbjct: 273 YGSRLGKVCEVDVGDDGRNMHDFFHIRVDLPVKRPLKEKIAIMILVQGKEE 323
>Os06g0715900
Length = 1302
Score = 252 bits (643), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 116/167 (69%), Positives = 137/167 (82%)
Query: 7 EIKQDGIWTVLARFYSLRNPNQTALFEDMSRAWRLRSDMTHKSLRDNLFIITFSTEGDYK 66
E+++ G WT+LARFYSLR PNQ ALF+DM RAWRLR+DM++KSL DN+FIITFS EGDY+
Sbjct: 140 EVQEAGQWTILARFYSLRVPNQAALFDDMRRAWRLRADMSYKSLWDNMFIITFSAEGDYE 199
Query: 67 FVLQGGPWLHKGDALLVAAFDGLTCPSKIPLETVPIWIRIYDLPLVLMTKARGQLYGSRF 126
FVL+GGPW+H+GDALLVA FDGL+ PS++PLETVPIW+RIYDLPLVLM KARG+LYGS+
Sbjct: 200 FVLKGGPWIHRGDALLVARFDGLSRPSEVPLETVPIWVRIYDLPLVLMMKARGELYGSKL 259
Query: 127 GCVREVDVEEDGRNRHDFFRIRVDXXXXXXXXXXXXXXMHVQGKEET 173
G VREVDV +DGRN+HDFFRIRVD M QGKE T
Sbjct: 260 GQVREVDVGDDGRNKHDFFRIRVDLSVKRPLKSKLAIKMLAQGKEVT 306
>Os10g0523300
Length = 1585
Score = 249 bits (635), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 116/172 (67%), Positives = 136/172 (79%)
Query: 2 NIEDEEIKQDGIWTVLARFYSLRNPNQTALFEDMSRAWRLRSDMTHKSLRDNLFIITFST 61
+++ +E G WTVLAR+YSL+ PNQ ALF+DM RAWRLR+DM +KSLRDNLFI++FS+
Sbjct: 156 SLDADEANLVGQWTVLARYYSLKTPNQNALFDDMRRAWRLRADMNYKSLRDNLFIVSFSS 215
Query: 62 EGDYKFVLQGGPWLHKGDALLVAAFDGLTCPSKIPLETVPIWIRIYDLPLVLMTKARGQL 121
EGDYKFV GGPWLH+GDALLVA FDGLT PS++PLE VPIW+RIYDLPLVLMTK RG L
Sbjct: 216 EGDYKFVKDGGPWLHRGDALLVAEFDGLTSPSQVPLEVVPIWVRIYDLPLVLMTKDRGIL 275
Query: 122 YGSRFGCVREVDVEEDGRNRHDFFRIRVDXXXXXXXXXXXXXXMHVQGKEET 173
YGS+ G VREVDVE DGRN+HDFFRIRVD ++VQG EE
Sbjct: 276 YGSKLGHVREVDVEADGRNKHDFFRIRVDLPVNRALKTHIAIKINVQGNEEA 327
>Os01g0218300
Length = 1605
Score = 248 bits (634), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 111/165 (67%), Positives = 135/165 (81%)
Query: 9 KQDGIWTVLARFYSLRNPNQTALFEDMSRAWRLRSDMTHKSLRDNLFIITFSTEGDYKFV 68
++ G WT+LARFYSL++PN ALFEDM RAWRLRSDMT+KSLRDNLFII+F EGDY+FV
Sbjct: 100 QKAGQWTILARFYSLKSPNLAALFEDMRRAWRLRSDMTYKSLRDNLFIISFGAEGDYRFV 159
Query: 69 LQGGPWLHKGDALLVAAFDGLTCPSKIPLETVPIWIRIYDLPLVLMTKARGQLYGSRFGC 128
+QGGPW+H+GDALLVA FDG+TCPSK+ L+ +P+W+RIYDLPLVLMTKARG++YGS+ G
Sbjct: 160 IQGGPWIHRGDALLVAEFDGITCPSKVTLDVIPVWVRIYDLPLVLMTKARGEIYGSKLGR 219
Query: 129 VREVDVEEDGRNRHDFFRIRVDXXXXXXXXXXXXXXMHVQGKEET 173
VREVDV +DGRN+HDFFRIRVD + QG+ ET
Sbjct: 220 VREVDVGDDGRNKHDFFRIRVDLSVKRPLKDKLTIKISAQGRVET 264
>Os11g0602000
Length = 1442
Score = 248 bits (633), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 112/145 (77%), Positives = 129/145 (88%)
Query: 3 IEDEEIKQDGIWTVLARFYSLRNPNQTALFEDMSRAWRLRSDMTHKSLRDNLFIITFSTE 62
+ED+E++ G WTVL+RFYSLR+PNQ ALF+DM RAWRLR++M KSLRDN+FIITFS+E
Sbjct: 100 LEDDEVQLAGQWTVLSRFYSLRSPNQAALFDDMKRAWRLRANMKVKSLRDNMFIITFSSE 159
Query: 63 GDYKFVLQGGPWLHKGDALLVAAFDGLTCPSKIPLETVPIWIRIYDLPLVLMTKARGQLY 122
GDY FVLQGGPWLH+GDALLVA FDGLT PS +PLE VPIW+RIYDLPLVLMTK RG+LY
Sbjct: 160 GDYNFVLQGGPWLHRGDALLVAKFDGLTSPSMVPLEFVPIWVRIYDLPLVLMTKRRGELY 219
Query: 123 GSRFGCVREVDVEEDGRNRHDFFRI 147
GS+ G VREVDV EDGRN+HDFFRI
Sbjct: 220 GSKLGHVREVDVGEDGRNKHDFFRI 244
>Os09g0477000
Length = 1605
Score = 247 bits (631), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 112/170 (65%), Positives = 136/170 (80%)
Query: 2 NIEDEEIKQDGIWTVLARFYSLRNPNQTALFEDMSRAWRLRSDMTHKSLRDNLFIITFST 61
N+EDEE+K G WT+L+R+YS+R P TALF+DM RAWRL+S M++KSLRDNLFI+TF++
Sbjct: 56 NLEDEEVKLAGQWTILSRYYSMRTPIPTALFDDMRRAWRLKSGMSYKSLRDNLFIVTFTS 115
Query: 62 EGDYKFVLQGGPWLHKGDALLVAAFDGLTCPSKIPLETVPIWIRIYDLPLVLMTKARGQL 121
EGDY+FV+QGGPWLH+GDALLVA FDG+ PS++PLE VPIW+RIYDLPLVLMT+ RG L
Sbjct: 116 EGDYQFVVQGGPWLHRGDALLVAQFDGIISPSQVPLEVVPIWVRIYDLPLVLMTRERGNL 175
Query: 122 YGSRFGCVREVDVEEDGRNRHDFFRIRVDXXXXXXXXXXXXXXMHVQGKE 171
YGS+ G VREVDVE DGRN+HDFFRIRVD + QG E
Sbjct: 176 YGSKLGHVREVDVENDGRNKHDFFRIRVDLPVKRPLRKKLAIKIKEQGSE 225
>Os07g0160166
Length = 1845
Score = 247 bits (630), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 110/165 (66%), Positives = 135/165 (81%)
Query: 9 KQDGIWTVLARFYSLRNPNQTALFEDMSRAWRLRSDMTHKSLRDNLFIITFSTEGDYKFV 68
++ G WT+LARFYSL++PN ALFEDM RAWRLRSDMT+KSLRDNLFII+F EGDY+FV
Sbjct: 242 QKAGQWTILARFYSLKSPNLAALFEDMRRAWRLRSDMTYKSLRDNLFIISFGAEGDYRFV 301
Query: 69 LQGGPWLHKGDALLVAAFDGLTCPSKIPLETVPIWIRIYDLPLVLMTKARGQLYGSRFGC 128
+QGGPW+H+GDALLVA FDG+TCPSK+ L+ +P+W+RIYDLPLVLMTKARG++YGS+ G
Sbjct: 302 IQGGPWIHRGDALLVAEFDGITCPSKVTLDVIPVWVRIYDLPLVLMTKARGEIYGSKLGR 361
Query: 129 VREVDVEEDGRNRHDFFRIRVDXXXXXXXXXXXXXXMHVQGKEET 173
V+EVDV +DGRN+HDFFRIRVD + QG+ ET
Sbjct: 362 VQEVDVGDDGRNKHDFFRIRVDLSVKRPLKDKLTIKISAQGRVET 406
>Os04g0363800
Length = 1715
Score = 247 bits (630), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 112/170 (65%), Positives = 138/170 (81%)
Query: 3 IEDEEIKQDGIWTVLARFYSLRNPNQTALFEDMSRAWRLRSDMTHKSLRDNLFIITFSTE 62
+E++E+K+ G WTVLARFYSL+ PNQ ALFEDM RAWRLR++M++KSL+DNLFI++FS E
Sbjct: 157 LEEDEVKKAGQWTVLARFYSLKFPNQVALFEDMRRAWRLRAEMSYKSLKDNLFIVSFSAE 216
Query: 63 GDYKFVLQGGPWLHKGDALLVAAFDGLTCPSKIPLETVPIWIRIYDLPLVLMTKARGQLY 122
GD+KFVLQGGPWLH+GDALLVA F+GL PS +PLET+PIW+RIYDLPLV+M K RG +Y
Sbjct: 217 GDHKFVLQGGPWLHRGDALLVADFNGLVSPSMVPLETMPIWVRIYDLPLVMMNKERGVIY 276
Query: 123 GSRFGCVREVDVEEDGRNRHDFFRIRVDXXXXXXXXXXXXXXMHVQGKEE 172
GS+ G VREVDV+EDG N+HDFFRIRVD + V+G EE
Sbjct: 277 GSKLGKVREVDVQEDGCNKHDFFRIRVDLPVNRPLKRMLAIKIKVKGAEE 326
>Os12g0268200
Length = 1876
Score = 246 bits (629), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 110/165 (66%), Positives = 134/165 (81%)
Query: 9 KQDGIWTVLARFYSLRNPNQTALFEDMSRAWRLRSDMTHKSLRDNLFIITFSTEGDYKFV 68
++ G WT+LARFYSL++PN ALFEDM RAWRLRSDMT+KSLRDNLFII+F EGDY+FV
Sbjct: 154 QKAGQWTILARFYSLKSPNLAALFEDMRRAWRLRSDMTYKSLRDNLFIISFGAEGDYRFV 213
Query: 69 LQGGPWLHKGDALLVAAFDGLTCPSKIPLETVPIWIRIYDLPLVLMTKARGQLYGSRFGC 128
+QGGPW+H+GDALLVA FDG+TCPSK+ L+ +P+W+RIYDLPLVLMTKARG++YGS+ G
Sbjct: 214 IQGGPWIHRGDALLVAEFDGITCPSKVTLDVIPVWVRIYDLPLVLMTKARGEIYGSKLGR 273
Query: 129 VREVDVEEDGRNRHDFFRIRVDXXXXXXXXXXXXXXMHVQGKEET 173
VREVDV +DGRN+HDFFRIR D + QG+ ET
Sbjct: 274 VREVDVGDDGRNKHDFFRIRADLSVKRPLKDKLTIKISAQGRVET 318
>Os11g0291200
Length = 647
Score = 246 bits (627), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 116/171 (67%), Positives = 135/171 (78%)
Query: 3 IEDEEIKQDGIWTVLARFYSLRNPNQTALFEDMSRAWRLRSDMTHKSLRDNLFIITFSTE 62
+E++EI + G WT+LA FYSLR PN +ALFEDM RAWRLR+DM+ KSLRDNLFIITFS E
Sbjct: 253 LEEDEIAKAGQWTILAHFYSLRAPNTSALFEDMRRAWRLRADMSFKSLRDNLFIITFSAE 312
Query: 63 GDYKFVLQGGPWLHKGDALLVAAFDGLTCPSKIPLETVPIWIRIYDLPLVLMTKARGQLY 122
GDY F+LQGGPW+H+GDALLVA FDGLTCPSKI L +VPIW+RIYDLPLVLM +ARG+LY
Sbjct: 313 GDYNFMLQGGPWIHRGDALLVAEFDGLTCPSKILLNSVPIWVRIYDLPLVLMIQARGKLY 372
Query: 123 GSRFGCVREVDVEEDGRNRHDFFRIRVDXXXXXXXXXXXXXXMHVQGKEET 173
GS+ VREVDV DG N++DFFRIRVD + VQGKE T
Sbjct: 373 GSKLSNVREVDVVTDGLNKYDFFRIRVDLPVNHPLKAKIAIKVAVQGKEVT 423
>Os04g0186333
Length = 358
Score = 244 bits (624), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 114/149 (76%), Positives = 131/149 (87%)
Query: 2 NIEDEEIKQDGIWTVLARFYSLRNPNQTALFEDMSRAWRLRSDMTHKSLRDNLFIITFST 61
+I D+E+KQ WT+LARFYS+R PN +ALFED+S+A R RSDM++KSL DNLFII F
Sbjct: 74 DIADDEMKQVVQWTILARFYSMRVPNHSALFEDISKASRRRSDMSYKSLHDNLFIINFKA 133
Query: 62 EGDYKFVLQGGPWLHKGDALLVAAFDGLTCPSKIPLETVPIWIRIYDLPLVLMTKARGQL 121
EGDYKFV+QGGPWLHKGDALLVA FDGLTCPS++ L+ V IWIRIYDLPLVLMTKA G+L
Sbjct: 134 EGDYKFVIQGGPWLHKGDALLVAEFDGLTCPSEVSLDVVTIWIRIYDLPLVLMTKAIGEL 193
Query: 122 YGSRFGCVREVDVEEDGRNRHDFFRIRVD 150
YGS+FG VREVDVEEDGRNRHDFFRIRV+
Sbjct: 194 YGSKFGKVREVDVEEDGRNRHDFFRIRVE 222
>Os06g0715800
Length = 1916
Score = 240 bits (613), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 110/165 (66%), Positives = 135/165 (81%)
Query: 9 KQDGIWTVLARFYSLRNPNQTALFEDMSRAWRLRSDMTHKSLRDNLFIITFSTEGDYKFV 68
++ G WT+LARFYSL+ PNQ+ALFEDM RAWRLR++M++KSL+DNLFI++F+ EGDY FV
Sbjct: 278 QKAGQWTILARFYSLKFPNQSALFEDMRRAWRLRAEMSYKSLKDNLFIVSFNAEGDYNFV 337
Query: 69 LQGGPWLHKGDALLVAAFDGLTCPSKIPLETVPIWIRIYDLPLVLMTKARGQLYGSRFGC 128
LQGGPWLH+GDALLVA F+GL PS + L+TVPIW+RIYDLPLV+M +ARG+LYGS+ G
Sbjct: 338 LQGGPWLHRGDALLVAEFNGLLNPSMVNLDTVPIWVRIYDLPLVMMNRARGELYGSKMGK 397
Query: 129 VREVDVEEDGRNRHDFFRIRVDXXXXXXXXXXXXXXMHVQGKEET 173
VREVDV+EDG N+HDFFRIRVD + VQGKEET
Sbjct: 398 VREVDVQEDGCNKHDFFRIRVDLPVNRPLRRMLAIKIKVQGKEET 442
>Os07g0511200
Length = 2034
Score = 238 bits (608), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 109/164 (66%), Positives = 134/164 (81%)
Query: 9 KQDGIWTVLARFYSLRNPNQTALFEDMSRAWRLRSDMTHKSLRDNLFIITFSTEGDYKFV 68
++ G WT+LARFYSL+ PNQ+ALFEDM RAWRLR++M++KSL+DNLFI++F+ EGDY FV
Sbjct: 300 QKAGQWTILARFYSLKFPNQSALFEDMRRAWRLRAEMSYKSLKDNLFIVSFNAEGDYNFV 359
Query: 69 LQGGPWLHKGDALLVAAFDGLTCPSKIPLETVPIWIRIYDLPLVLMTKARGQLYGSRFGC 128
LQGGPWLH+GDALLVA F+GL PS + L+TVPIW+RIYDLPLV+M +ARG+LYGS+ G
Sbjct: 360 LQGGPWLHRGDALLVAEFNGLLNPSMVNLDTVPIWVRIYDLPLVMMNRARGELYGSKMGK 419
Query: 129 VREVDVEEDGRNRHDFFRIRVDXXXXXXXXXXXXXXMHVQGKEE 172
VREVDV+EDG N+HDFFRIRVD + VQGKEE
Sbjct: 420 VREVDVQEDGCNKHDFFRIRVDLPVNRPLRRMLAIKIKVQGKEE 463
>Os12g0156200 Similar to DNA-binding factor of bZIP class
Length = 618
Score = 237 bits (605), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 109/165 (66%), Positives = 134/165 (81%)
Query: 9 KQDGIWTVLARFYSLRNPNQTALFEDMSRAWRLRSDMTHKSLRDNLFIITFSTEGDYKFV 68
++ G WT+LARFYSL+ PNQ+ALFEDM RAWRLR++M++KSL+DNLFI++F+ EGDY FV
Sbjct: 351 QKAGQWTILARFYSLKFPNQSALFEDMRRAWRLRAEMSYKSLKDNLFIVSFNAEGDYNFV 410
Query: 69 LQGGPWLHKGDALLVAAFDGLTCPSKIPLETVPIWIRIYDLPLVLMTKARGQLYGSRFGC 128
LQG PWLH+GDALLVA F+GL PS + L+TVPIW+RIYDLPLV+M +ARG+LYGS+ G
Sbjct: 411 LQGDPWLHRGDALLVAEFNGLLNPSMVNLDTVPIWVRIYDLPLVMMNRARGELYGSKMGK 470
Query: 129 VREVDVEEDGRNRHDFFRIRVDXXXXXXXXXXXXXXMHVQGKEET 173
VREVDV+EDG N+HDFFRIRVD + VQGKEET
Sbjct: 471 VREVDVQEDGCNKHDFFRIRVDLPVNRPLRRMLAIKIKVQGKEET 515
>Os06g0481300
Length = 1415
Score = 236 bits (603), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 111/165 (67%), Positives = 130/165 (78%)
Query: 9 KQDGIWTVLARFYSLRNPNQTALFEDMSRAWRLRSDMTHKSLRDNLFIITFSTEGDYKFV 68
++ G TVLARFYS+R PN ALFEDM RAWRLR++M++KSL+DNLFIITFS EGDY FV
Sbjct: 92 QKAGQLTVLARFYSMRFPNPVALFEDMRRAWRLRAEMSYKSLKDNLFIITFSNEGDYLFV 151
Query: 69 LQGGPWLHKGDALLVAAFDGLTCPSKIPLETVPIWIRIYDLPLVLMTKARGQLYGSRFGC 128
LQGGPWLH+GDA+LVA FDGLT PS +PL+TVPIW+R+YDLPLV+M KARG LYGS+ G
Sbjct: 152 LQGGPWLHRGDAILVAEFDGLTNPSMVPLDTVPIWVRVYDLPLVMMNKARGDLYGSKIGK 211
Query: 129 VREVDVEEDGRNRHDFFRIRVDXXXXXXXXXXXXXXMHVQGKEET 173
VREVDV+ G NRHDFFRIRVD + + GKEET
Sbjct: 212 VREVDVDAFGSNRHDFFRIRVDLPVNKPLKTKLDIKIKINGKEET 256
>Os06g0472800
Length = 1310
Score = 210 bits (535), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 92/145 (63%), Positives = 118/145 (81%)
Query: 28 QTALFEDMSRAWRLRSDMTHKSLRDNLFIITFSTEGDYKFVLQGGPWLHKGDALLVAAFD 87
+ ALFEDM RAWRLR++M++KSL+DNLFI+TF+ EGD+KFVLQGGPW+H+GDAL+VA F+
Sbjct: 291 EVALFEDMGRAWRLRAEMSYKSLKDNLFIVTFNAEGDHKFVLQGGPWIHRGDALIVADFN 350
Query: 88 GLTCPSKIPLETVPIWIRIYDLPLVLMTKARGQLYGSRFGCVREVDVEEDGRNRHDFFRI 147
GL PS +PLE+VPIW+RIYDLPLV+M KARG+LYGS+ G VREVDV+++G N+HDFFRI
Sbjct: 351 GLLSPSMVPLESVPIWVRIYDLPLVMMNKARGELYGSKLGKVREVDVQQNGSNKHDFFRI 410
Query: 148 RVDXXXXXXXXXXXXXXMHVQGKEE 172
RVD + ++G EE
Sbjct: 411 RVDLPVNRPLKRQIAIKIKIKGAEE 435
>Os11g0106066 RNA-directed DNA polymerase (Reverse transcriptase) domain
containing protein
Length = 1690
Score = 209 bits (531), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 92/145 (63%), Positives = 117/145 (80%)
Query: 28 QTALFEDMSRAWRLRSDMTHKSLRDNLFIITFSTEGDYKFVLQGGPWLHKGDALLVAAFD 87
+ ALFEDM RAWRLR++M++KSL+DNLFI+TF+ EGD+KFVLQGGPW+H+GDAL+VA F+
Sbjct: 344 EVALFEDMGRAWRLRAEMSYKSLKDNLFIVTFNAEGDHKFVLQGGPWIHRGDALIVADFN 403
Query: 88 GLTCPSKIPLETVPIWIRIYDLPLVLMTKARGQLYGSRFGCVREVDVEEDGRNRHDFFRI 147
GL PS +PLE+VPIW+RIYDLPLV+M KARG+LYGS+ G VRE DV++DG N+HDFFRI
Sbjct: 404 GLLSPSMVPLESVPIWVRIYDLPLVMMNKARGELYGSKLGKVREEDVQQDGSNKHDFFRI 463
Query: 148 RVDXXXXXXXXXXXXXXMHVQGKEE 172
RVD + ++G EE
Sbjct: 464 RVDLPVNRPLKRQIAIKIKIKGVEE 488
>Os02g0288950
Length = 501
Score = 204 bits (518), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 100/171 (58%), Positives = 120/171 (70%), Gaps = 24/171 (14%)
Query: 2 NIEDEEIKQDGIWTVLARFYSLRNPNQTALFEDMSRAWRLRSDMTHKSLRDNLFIITFST 61
NIED+E++ G+WT+LARFYSLR PNQ ALF+DM RAWRLR+DM++KSLRDN+
Sbjct: 233 NIEDDELQTAGLWTILARFYSLRTPNQVALFDDMRRAWRLRADMSYKSLRDNI------- 285
Query: 62 EGDYKFVLQGGPWLHKGDALLVAAFDGLTCPSKIPLETVPIWIRIYDLPLVLMTKARGQL 121
GDALLVA+FDG+TCPS +PL+ VPIW+RIYDLPLVLMTK RG +
Sbjct: 286 ----------------GDALLVASFDGITCPSNVPLDVVPIWVRIYDLPLVLMTKVRGGM 329
Query: 122 YGSRFGCVREVDVEEDGRNRHDFFR-IRVDXXXXXXXXXXXXXXMHVQGKE 171
+GS+ G VREVDV +DGRN+HDFFR IRVD M VQGKE
Sbjct: 330 FGSKLGKVREVDVRDDGRNKHDFFRIIRVDLPVKRPLKSQIAIRMTVQGKE 380
>Os11g0437700
Length = 1123
Score = 177 bits (449), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 88/148 (59%), Positives = 108/148 (72%), Gaps = 17/148 (11%)
Query: 3 IEDEEIKQDGIWTVLARFYSLRNPNQTALFEDMSRAWRLRSDMTHKSLRDNLFIITFSTE 62
+E++EI++ G WT+LARFYSLR+PN ALF+DM RAWRL++DM+ KS+RDNLFIITF E
Sbjct: 57 LEEDEIEKAGQWTILARFYSLRSPNILALFDDMRRAWRLQADMSFKSMRDNLFIITFMAE 116
Query: 63 GDYKFVLQGGPWLHKGDALLVAAFDGLTCPSKIPLETVPIWIRIYDLPLVLMTKARGQLY 122
GDY FVL GDALLVA FDG TCPSKI L +VPIW+RIYDLPLVLMT+ARG+LY
Sbjct: 117 GDYNFVL--------GDALLVADFDGTTCPSKIHLNSVPIWVRIYDLPLVLMTQARGKLY 168
Query: 123 GSRFGCVREVDVEEDGRNRHDFFRIRVD 150
+ +++G N FR D
Sbjct: 169 A---------NCDKNGANADHPFRFSAD 187
>Os05g0155900
Length = 1936
Score = 153 bits (387), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 83/170 (48%), Positives = 100/170 (58%), Gaps = 36/170 (21%)
Query: 3 IEDEEIKQDGIWTVLARFYSLRNPNQTALFEDMSRAWRLRSDMTHKSLRDNLFIITFSTE 62
+E++E+K+ G WTVLARFYSL+ PNQ R RS
Sbjct: 252 LEEDEVKKAGQWTVLARFYSLKFPNQC----------RRRS------------------- 282
Query: 63 GDYKFVLQGGPWLHKGDALLVAAFDGLTCPSKIPLETVPIWIRIYDLPLVLMTKARGQLY 122
Q WLH+GDALLVA F+GL PS +PLETVPIW+RIYDLPLV+M K RG +Y
Sbjct: 283 -------QVRSWLHRGDALLVADFNGLVSPSMVPLETVPIWVRIYDLPLVMMNKERGVIY 335
Query: 123 GSRFGCVREVDVEEDGRNRHDFFRIRVDXXXXXXXXXXXXXXMHVQGKEE 172
GS+ G VREVDV+EDG N+HDFFRIRVD + V+G EE
Sbjct: 336 GSKLGKVREVDVQEDGCNKHDFFRIRVDLPVNRPLKRMLAIKIKVKGAEE 385
>Os11g0263800
Length = 522
Score = 148 bits (374), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 66/104 (63%), Positives = 80/104 (76%)
Query: 68 VLQGGPWLHKGDALLVAAFDGLTCPSKIPLETVPIWIRIYDLPLVLMTKARGQLYGSRFG 127
+ GGPW+H+GDALLV FDG+T PS++PLE VPIW+RIYDLPLVLMTKARG+LYGS+ G
Sbjct: 177 AMGGGPWIHRGDALLVGEFDGITSPSRVPLEVVPIWVRIYDLPLVLMTKARGELYGSKLG 236
Query: 128 CVREVDVEEDGRNRHDFFRIRVDXXXXXXXXXXXXXXMHVQGKE 171
VRE+DVEEDGRN+HD FRIRV+ ++VQG E
Sbjct: 237 RVREIDVEEDGRNKHDSFRIRVELSVKRPLRSKLAIKINVQGNE 280
>Os01g0177866
Length = 712
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 93/140 (66%)
Query: 11 DGIWTVLARFYSLRNPNQTALFEDMSRAWRLRSDMTHKSLRDNLFIITFSTEGDYKFVLQ 70
D + + +F+S R + LFE M +AW LR M +K L DN F++ F + GD++F
Sbjct: 52 DTQYVAIGKFFSRRTFSAKGLFEAMQKAWGLRQGMEYKRLHDNRFLLEFQSAGDFRFATG 111
Query: 71 GGPWLHKGDALLVAAFDGLTCPSKIPLETVPIWIRIYDLPLVLMTKARGQLYGSRFGCVR 130
GGPW+++GDA L+ +DG + PS + L ++P+W+RIYDLPL +MT+ G+L G+R G VR
Sbjct: 112 GGPWIYQGDAFLITEYDGKSRPSDVKLNSLPVWVRIYDLPLSMMTETMGKLIGARLGEVR 171
Query: 131 EVDVEEDGRNRHDFFRIRVD 150
+V V++ GR DF R+R +
Sbjct: 172 KVAVDDQGRAWDDFMRVRAE 191
>Os11g0501300
Length = 691
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 60/87 (68%), Positives = 74/87 (85%)
Query: 12 GIWTVLARFYSLRNPNQTALFEDMSRAWRLRSDMTHKSLRDNLFIITFSTEGDYKFVLQG 71
G WT+LARFYSL+ PN AL EDM RAWR+R++M++KSL+DNLFIITFS +GDY FVLQG
Sbjct: 174 GQWTILARFYSLKFPNVVALSEDMRRAWRIRAEMSYKSLKDNLFIITFSMKGDYNFVLQG 233
Query: 72 GPWLHKGDALLVAAFDGLTCPSKIPLE 98
GPWLH+GDA L+A FDGLT PS + ++
Sbjct: 234 GPWLHRGDASLIADFDGLTSPSMLAVK 260
>Os04g0470900
Length = 358
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 75/101 (74%), Gaps = 10/101 (9%)
Query: 2 NIEDEEIKQDGIWTVLARFYSLRNPNQTALFEDMSRAWRLRSDMTHKSLRDNLFIITFST 61
N+E++E+++ G WT+L+ FYSLR PN TALFEDMSRAWRLR+DM +K+LRDN+FIITF +
Sbjct: 257 NLEEDEVEKAGQWTILSCFYSLRIPNATALFEDMSRAWRLRADMNYKALRDNMFIITFGS 316
Query: 62 EGDYKFVLQGGPWLHKGDALLVAAFDGLTCPSKIPLETVPI 102
EGDY FVLQGGPWL L+ A IPL+ P+
Sbjct: 317 EGDYNFVLQGGPWLRPNTRLVGA----------IPLKPQPL 347
>Os09g0107880
Length = 269
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 53/68 (77%), Positives = 59/68 (86%)
Query: 61 TEGDYKFVLQGGPWLHKGDALLVAAFDGLTCPSKIPLETVPIWIRIYDLPLVLMTKARGQ 120
+EGD+KFVLQGGPWLH+GDALLV FDGLT PS +PL+ VPIWIRIYDLPLVLMTKARG+
Sbjct: 71 SEGDFKFVLQGGPWLHRGDALLVVEFDGLTSPSNVPLDVVPIWIRIYDLPLVLMTKARGE 130
Query: 121 LYGSRFGC 128
LYG F
Sbjct: 131 LYGRSFAS 138
>Os06g0609100
Length = 1180
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 68/97 (70%)
Query: 79 DALLVAAFDGLTCPSKIPLETVPIWIRIYDLPLVLMTKARGQLYGSRFGCVREVDVEEDG 138
DALLVA FDG T PS++PL+ VPIW+RIYDLPL LMTKA+G+L+G++ G V EVDVEEDG
Sbjct: 354 DALLVAHFDGFTSPSEVPLDVVPIWVRIYDLPLALMTKAQGELFGNKLGKVHEVDVEEDG 413
Query: 139 RNRHDFFRIRVDXXXXXXXXXXXXXXMHVQGKEETSL 175
+N HD FRIRVD + VQG +S
Sbjct: 414 QNLHDLFRIRVDLSVKHPLKSQIAIEVSVQGSASSSF 450
>Os01g0559400
Length = 1339
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 83/146 (56%), Gaps = 26/146 (17%)
Query: 4 EDEEIKQDGIWTVLARFYSLRNPNQTALFEDMSRAWRLRSDMTHKSLRDNLFIITFSTEG 63
E EE+K W ++ARFYS + RL SL DN F++ F+ E
Sbjct: 71 EVEEMKSK--WLIIARFYSGQRE-------------RL------GSLGDNRFLVEFACEA 109
Query: 64 DYKFVLQGGPWLHKGDALLVAAFDGLTCPSKIPLETVPIWIRIYDLPLVLMTKARGQLYG 123
DY V+ GGPW HKGDALLV +DGL PS+I +E++P+W+RIYDLP ++MT + G
Sbjct: 110 DYNRVVYGGPWKHKGDALLVVPYDGLARPSEICIESLPLWLRIYDLPEIMMTTGFARSLG 169
Query: 124 SRFGCVREVDVEEDGRNRHDFFRIRV 149
+ G V EV G HDF R++V
Sbjct: 170 GKIGEVLEV-----GGAIHDFLRVKV 190
>Os05g0331600
Length = 1356
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 76/139 (54%), Gaps = 1/139 (0%)
Query: 11 DGIWTVLARFYSLRNPNQTALFEDMSRAWRLRSDMTHKSLRDNLFIITFSTEGDYKFVLQ 70
D W LAR ++ ++ + ALF M AW ++ +S++DNLF I + D++ V++
Sbjct: 60 DARWLALARVHTEKSFSHGALFASMRSAWNCAKEVDFRSMKDNLFSIQLNCLADWERVME 119
Query: 71 GGPWLHKGDALLVAAFDGLTCPSKIPLETVPIWIRIYDLPLVLMTKARGQLYGSRFGCVR 130
GPW+ +G +L+A +DG + + LET P W++I+DL + T + + G V
Sbjct: 120 EGPWIFRGCPVLLAEYDGWSEIESVVLETYPTWVQIHDLKEKIRTGSIATQLVRKAGTVI 179
Query: 131 EVDVEEDGRNRHDFFRIRV 149
++D E + D R+RV
Sbjct: 180 KLD-EASVKGSGDGVRVRV 197
>Os01g0521000
Length = 1279
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 50/78 (64%)
Query: 27 NQTALFEDMSRAWRLRSDMTHKSLRDNLFIITFSTEGDYKFVLQGGPWLHKGDALLVAAF 86
N LFE+MS AW L + L +N F+I F E D K V+ GGPW HKGDAL+V +
Sbjct: 46 NVKGLFEEMSTAWGLHETRRTRDLGENKFLIEFGCEADLKRVINGGPWKHKGDALIVVPY 105
Query: 87 DGLTCPSKIPLETVPIWI 104
DG+ P ++ ++++P+W+
Sbjct: 106 DGIVRPLEVVIDSIPLWV 123
>Os10g0362600
Length = 1525
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 61/135 (45%)
Query: 15 TVLARFYSLRNPNQTALFEDMSRAWRLRSDMTHKSLRDNLFIITFSTEGDYKFVLQGGPW 74
+ +A S R + L + + W ++ K L +N F+ TF + L+ GPW
Sbjct: 21 SAVAPTASFRVNRKDGLAHALGKIWCPIKGVSCKDLGENHFLFTFHQASGKRRALEDGPW 80
Query: 75 LHKGDALLVAAFDGLTCPSKIPLETVPIWIRIYDLPLVLMTKARGQLYGSRFGCVREVDV 134
+ D +++ D + VPIW+R LPL LMTK G G G +D+
Sbjct: 81 MFNKDLVVMIDLDETKLIEDMIFAFVPIWVRAMKLPLGLMTKETGMAIGREVGEFMTMDL 140
Query: 135 EEDGRNRHDFFRIRV 149
EEDG F RI++
Sbjct: 141 EEDGSAVGQFLRIKI 155
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.326 0.139 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,771,386
Number of extensions: 295419
Number of successful extensions: 774
Number of sequences better than 1.0e-10: 34
Number of HSP's gapped: 771
Number of HSP's successfully gapped: 34
Length of query: 246
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 148
Effective length of database: 11,918,829
Effective search space: 1763986692
Effective search space used: 1763986692
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 155 (64.3 bits)