Os12g0156200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to DNA-binding factor of bZIP class.
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Os12g0156200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to DNA-binding factor of bZIP class.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 295.02 | 0.807 | 3.07 | -0.051 | 0.111 | 7.82 | 0.494 | -25.5 | -0.0931 | 14.4 | 0.007531 | 3 | -- | -- |
| 307.59 | 0.823 | 3.04 | 0.012 | 0.102 | -0.383 | 0.507 | -- | -0.105 | 13.7 | 0.1205 | 30 | -- | -- |
| 295.85 | 0.801 | 3.06 | -0.0374 | 0.114 | 7.8 | -- | -25.7 | -0.0913 | 13.3 | 1.469e-05 | 3 | -- | -- |
| 308.43 | 0.823 | 3.04 | 0.0284 | 0.113 | -0.441 | -- | -- | -0.104 | 11.6 | 0.1205 | 30 | -- | -- |
| 296.64 | 0.802 | 3.07 | -0.0407 | -- | 7.75 | -- | -25.7 | -0.0931 | -- | 0.0002643 | 3 | -- | -- |
| 307.77 | 0.822 | 3.04 | 0.00512 | 0.105 | -- | 0.52 | -- | -0.105 | 13.7 | -- | -- | -- | -- |
| 308.67 | 0.823 | 3.04 | 0.021 | 0.115 | -- | -- | -- | -0.103 | 11.7 | -- | -- | -- | -- |
| 309.23 | 0.823 | 3.04 | 0.0258 | -- | -0.475 | -- | -- | -0.105 | -- | 0.1428 | 30 | -- | -- |
| 308.42 | 0.818 | 3.04 | -- | 0.112 | -0.402 | -- | -- | -0.107 | 11.7 | 0.7178 | 25 | -- | -- |
| 309.51 | 0.822 | 3.04 | 0.0177 | -- | -- | -- | -- | -0.104 | -- | -- | -- | -- | -- |
| 308.68 | 0.822 | 3.04 | -- | 0.115 | -- | -- | -- | -0.105 | 11.7 | -- | -- | -- | -- |
| 309.2 | 0.819 | 3.04 | -- | -- | -0.437 | -- | -- | -0.108 | -- | 0.7374 | 25 | -- | -- |
| 309.52 | 0.821 | 3.04 | -- | -- | -- | -- | -- | -0.106 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 291.12 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 5 | 21 |
| 3 | 291.12 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 5 | 21 |
| 9 | 292.14 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 4 | 4 |
| 12 | 292.26 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 4 | 4 |
| 15 | 292.47 | wind | 3.0 | 30 | > th | dose independent | rect. | 5 | 2 |
| 16 | 292.55 | wind | 3.0 | 90 | > th | dose dependent | rect. | 5 | 2 |
| 18 | 292.56 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 4 | 12 |
| 20 | 292.60 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 5 | 3 |
| 36 | 292.60 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 189 | 295.15 | radiation | 1.0 | 10 | < th | dose independent | rect. | 5 | 2 |
| 203 | 295.56 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 5 | 2 |
| 209 | 295.73 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 5 | 19 |
| 211 | 295.73 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 5 | 19 |
| 216 | 296.00 | wind | 1.0 | 30 | < th | dose independent | rect. | 15 | 1 |
| 218 | 296.00 | wind | 1.0 | 30 | < th | dose dependent | rect. | 15 | 1 |
| 220 | 296.01 | humidity | 90.0 | 90 | > th | dose independent | rect. | 14 | 1 |
| 223 | 296.01 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 14 | 1 |
| 243 | 296.29 | wind | 1.0 | 30 | < th | dose independent | rect. | 14 | 9 |
| 244 | 296.31 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 2 | NA |
| 245 | 296.32 | precipitation | 0.1 | 10 | > th | dose independent | sin | 2 | NA |
| 246 | 296.34 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 4 | 15 |
| 281 | 296.78 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 14 | 3 |
| 283 | 296.79 | precipitation | 0.1 | 10 | < th | dose independent | sin | 1 | NA |
| 285 | 296.79 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 1 | NA |
| 295 | 297.00 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 14 | 1 |
| 298 | 297.00 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 14 | 1 |
| 303 | 297.12 | wind | 1.0 | 30 | < th | dose independent | rect. | 12 | 4 |
| 311 | 297.37 | humidity | 80.0 | 720 | < th | dose independent | rect. | 24 | 1 |
| 313 | 297.37 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 24 | 1 |
| 323 | 297.46 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 23 | 3 |
| 324 | 297.46 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 23 | 3 |
| 350 | 297.68 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 22 | 1 |
| 352 | 297.69 | wind | 1.0 | 30 | < th | dose independent | rect. | 12 | 11 |
| 353 | 297.71 | humidity | 80.0 | 10 | < th | dose independent | rect. | 22 | 3 |
| 361 | 297.78 | humidity | 80.0 | 90 | < th | dose independent | rect. | 22 | 2 |
| 366 | 297.82 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 23 | 7 |
| 369 | 297.84 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 23 | 7 |
| 415 | 297.91 | humidity | 80.0 | 10 | < th | dose independent | rect. | 24 | 4 |
| 430 | 297.92 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 24 | 4 |
| 433 | 297.92 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 1 | 5 |
| 438 | 297.93 | wind | 1.0 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 439 | 297.93 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 1 | 5 |
| 490 | 298.01 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 23 | 17 |
| 498 | 298.06 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 1 | 16 |
| 520 | 298.23 | wind | 5.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 537 | 298.31 | wind | 3.0 | 270 | > th | dose dependent | rect. | 2 | 4 |
| 543 | 298.38 | wind | 1.0 | 30 | < th | dose dependent | rect. | 12 | 4 |
| 551 | 298.40 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 23 | 3 |
| 552 | 298.40 | humidity | 50.0 | 720 | > th | dose independent | rect. | 16 | 9 |
| 553 | 298.40 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 23 | 3 |
| 569 | 298.56 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 13 | 1 |
| 585 | 298.61 | wind | 7.0 | 270 | > th | dose dependent | rect. | 2 | 7 |
| 596 | 298.72 | precipitation | 0.1 | 90 | > th | dose independent | sin | 4 | NA |
| 613 | 298.81 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 23 | 7 |
| 622 | 298.85 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 6 | 3 |
| 628 | 298.90 | wind | 7.0 | 270 | > th | dose independent | rect. | 2 | 6 |
| 635 | 298.96 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 8 | 1 |
| 640 | 298.98 | wind | 1.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 650 | 299.01 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 23 | 8 |
| 660 | 299.10 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 19 | 13 |
| 709 | 299.14 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 19 | 7 |
| 722 | 299.17 | humidity | 50.0 | 4320 | < th | dose dependent | rect. | 14 | 2 |
| 727 | 299.19 | humidity | 50.0 | 720 | > th | dose independent | rect. | 16 | 16 |
| 728 | 299.19 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 19 | 13 |
| 784 | 299.24 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 23 | 18 |
| 789 | 299.26 | precipitation | 0.1 | 10 | > th | dose independent | no | NA | NA |
| 790 | 299.26 | precipitation | 0.1 | 10 | < th | dose independent | no | NA | NA |
| 830 | 299.26 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 7 | 23 |
| 842 | 299.26 | precipitation | 0.1 | 10 | < th | dose dependent | no | NA | NA |
| 847 | 299.28 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 1 | 16 |
| 876 | 299.32 | radiation | 10.0 | 30 | > th | dose independent | rect. | 16 | 23 |
| 879 | 299.33 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 4 | 22 |
| 891 | 299.36 | precipitation | 0.1 | 90 | > th | dose dependent | sin | 5 | NA |
| 893 | 299.38 | precipitation | 0.1 | 10 | > th | dose dependent | no | NA | NA |
| 932 | 299.38 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 972 | 299.41 | wind | 1.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 981 | 299.46 | wind | 1.0 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 990 | 299.50 | wind | 9.0 | 10 | > th | dose independent | rect. | 15 | 1 |