BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0160400 Os07g0160400|AK120286
         (188 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os07g0160400  Glyoxalase/bleomycin resistance protein/dioxyg...   312   1e-85
Os05g0171900  Glyoxalase/bleomycin resistance protein/dioxyg...    71   5e-13

>Os07g0160400 Glyoxalase/bleomycin resistance protein/dioxygenase domain
           containing protein
          Length = 188

 Score =  312 bits (799), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 148/148 (100%), Positives = 148/148 (100%)

Query: 41  GTRLSVATGGEQLVTAQEASQEPAYGVVSIHHVGILCENLERSMAFYKDLLGLKVNPARP 100
           GTRLSVATGGEQLVTAQEASQEPAYGVVSIHHVGILCENLERSMAFYKDLLGLKVNPARP
Sbjct: 41  GTRLSVATGGEQLVTAQEASQEPAYGVVSIHHVGILCENLERSMAFYKDLLGLKVNPARP 100

Query: 101 TDKLPYRGAWLWVGSEMIHLMELPNPDPLTGRPEHGGRDRHTCMAIKDVLKLKEIFDKAG 160
           TDKLPYRGAWLWVGSEMIHLMELPNPDPLTGRPEHGGRDRHTCMAIKDVLKLKEIFDKAG
Sbjct: 101 TDKLPYRGAWLWVGSEMIHLMELPNPDPLTGRPEHGGRDRHTCMAIKDVLKLKEIFDKAG 160

Query: 161 IKYTLSKSGRPAIFARDPDGNALEFTQV 188
           IKYTLSKSGRPAIFARDPDGNALEFTQV
Sbjct: 161 IKYTLSKSGRPAIFARDPDGNALEFTQV 188



>Os05g0171900 Glyoxalase/bleomycin resistance protein/dioxygenase domain
           containing protein
          Length = 208

 Score = 70.9 bits (172), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 7/139 (5%)

Query: 54  VTAQEASQEPAYGVVSIHHVGILCENLERSMAFYKDLLGLKVNPARPTDKLPYRGAWLWV 113
           V A + S+     + S++H+ I+C +L+ S+ FY D+LG    P R      + GAWL+ 
Sbjct: 7   VAAAKGSRGSGLPLASLNHISIVCRSLQESLTFYTDVLGFF--PVRRPGSFDFDGAWLFN 64

Query: 114 GSEMIHLMELPNPDPLTGRPEHGGRDRHTCMAIKDVLKLKEIFDKAGIKY---TLSKSG- 169
               IHL++  +PD L G+ E   +D H     + ++ ++    + GI Y    + + G 
Sbjct: 65  YGIGIHLLQAEDPDSLPGKTEINPKDNHISFQCESMVAVERRLKELGIPYIQRCVEEGGI 124

Query: 170 -RPAIFARDPDGNALEFTQ 187
               IF  DPDG  +E   
Sbjct: 125 YVDQIFFHDPDGFMIEICN 143



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.319    0.137    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,841,959
Number of extensions: 253899
Number of successful extensions: 462
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 462
Number of HSP's successfully gapped: 2
Length of query: 188
Length of database: 17,035,801
Length adjustment: 95
Effective length of query: 93
Effective length of database: 12,075,471
Effective search space: 1123018803
Effective search space used: 1123018803
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 153 (63.5 bits)