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Os07g0160400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Glyoxalase/bleomycin resistance protein/dioxygenase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.8 (0.0241) R2 : 0.919
β1 : -- (--) R2dD : -- R2D : --
β2 : 5.56 (0.077) R2dC : 1.65 R2C : 0.278
β3 : 3.18 (0.07) R2dE : 0.642 R2E : -0.732
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0761 (0.0507) R2dN8 : 6.18e-05 R2N8 : -0.00606
σ : 0.452
deviance : 94.24
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_____
C
peak time of C : 10.7
E
wheather : radiation
threshold : 0.02997
memory length : 305
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 6.6
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
87.53 0.44 13.7 0.197 5.6 3.24 0.944 -0.392 0.0734 10.8 0.05 282 6.1 --
87.57 0.436 13.8 0.217 5.57 3.19 1.14 -- 0.0591 10.8 0.05 292 6.14 --
88.86 0.439 13.7 0.22 5.58 3.29 -- -1.07 0.121 10.8 0.04873 290 6.13 --
93.49 0.45 13.8 0.16 5.61 3.21 -- -- 0.05 10.8 0.04999 290 6.44 --
109.61 0.488 13.9 0.198 -- 5.16 -- 2.65 0.0935 -- 1.114 930 4.33 --
133.21 0.541 13.8 0.0825 4.31 -- 1.21 -- -0.0197 8.22 -- -- -- --
137.71 0.55 13.8 0.117 4.31 -- -- -- -0.0208 8.2 -- -- -- --
110.41 0.489 13.9 0.288 -- 5.25 -- -- 0.141 -- 1.02 950 4.86 --
94.24 0.452 13.8 -- 5.56 3.18 -- -- 0.0761 10.7 0.02997 305 6.6 --
1162.22 1.59 13.9 0.15 -- -- -- -- 0.0288 -- -- -- -- --
138.08 0.55 13.8 -- 4.31 -- -- -- -0.0339 8.2 -- -- -- --
112.77 0.495 13.9 -- -- 5.2 -- -- 0.112 -- 1.08 953 4.96 --
1162.82 1.59 13.9 -- -- -- -- -- 0.0121 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 78.04 temperature 20.0 270 > th dose independent rect. 15 6
3 78.40 temperature 10.0 270 > th dose dependent rect. 15 6
13 83.03 temperature 20.0 270 > th dose independent rect. 16 3
18 84.07 wind 9.0 270 < th dose independent rect. 16 16
19 84.10 temperature 10.0 270 > th dose independent rect. 8 8
20 84.10 atmosphere 1015.0 270 < th dose independent rect. 8 8
21 84.10 temperature 10.0 270 > th dose independent rect. 16 16
22 84.10 radiation 40.0 270 < th dose independent rect. 16 16
27 84.36 radiation 1.0 270 > th dose independent rect. 9 6
28 84.44 precipitation 0.1 270 < th dose independent rect. 8 8
29 84.44 precipitation 0.1 270 < th dose dependent rect. 8 8
31 84.54 wind 9.0 270 < th dose independent rect. 8 8
36 84.99 radiation 1.0 270 > th dose independent rect. 8 8
39 85.22 wind 9.0 270 < th dose independent rect. 15 18
41 85.31 temperature 10.0 270 > th dose independent rect. 9 6
42 85.31 atmosphere 1015.0 270 < th dose independent rect. 9 6
43 85.31 temperature 10.0 270 > th dose independent rect. 15 18
45 85.35 temperature 15.0 10 > th dose dependent rect. 16 7
47 85.37 radiation 40.0 270 < th dose independent rect. 15 18
49 85.46 wind 9.0 270 < th dose independent rect. 9 6
51 85.53 precipitation 0.1 270 < th dose independent rect. 9 6
52 85.53 precipitation 0.1 270 < th dose dependent rect. 9 6
58 85.94 atmosphere 995.0 270 > th dose independent rect. 9 6
60 86.10 atmosphere 995.0 270 > th dose independent rect. 16 16
65 86.32 precipitation 0.1 270 < th dose independent rect. 19 9
66 86.32 precipitation 0.1 270 < th dose dependent rect. 19 9
67 86.34 atmosphere 995.0 270 > th dose independent rect. 8 8
68 86.37 wind 9.0 270 < th dose independent rect. 20 8
70 86.39 temperature 10.0 270 > th dose independent rect. 20 8
71 86.39 temperature 30.0 270 < th dose independent rect. 20 8
72 86.39 humidity 50.0 270 > th dose independent rect. 20 8
75 86.39 atmosphere 995.0 270 > th dose independent rect. 20 8
76 86.39 radiation 1.0 270 < th dose independent rect. 20 8
81 86.39 temperature 10.0 270 > th dose independent rect. 4 16
82 86.39 atmosphere 1015.0 270 < th dose independent rect. 4 16
83 86.39 radiation 10.0 270 < th dose dependent rect. 20 8
112 86.72 wind 9.0 270 < th dose independent rect. 4 16
127 87.21 wind 9.0 270 < th dose independent rect. 14 7
128 87.28 wind 9.0 270 < th dose independent rect. 21 17
131 87.43 temperature 10.0 270 > th dose independent rect. 14 7
132 87.43 temperature 10.0 270 > th dose independent rect. 21 17
133 87.43 atmosphere 995.0 270 > th dose independent rect. 21 17
134 87.60 humidity 90.0 270 < th dose independent rect. 16 3
135 87.62 precipitation 0.1 270 < th dose independent rect. 21 17
136 87.62 precipitation 0.1 270 < th dose dependent rect. 21 17
137 87.68 radiation 40.0 270 < th dose independent rect. 15 6
143 87.87 precipitation 0.1 270 < th dose independent rect. 16 16
144 87.87 precipitation 0.1 270 < th dose dependent rect. 16 16
145 87.88 atmosphere 1015.0 270 < th dose independent rect. 14 7
151 88.11 wind 1.0 270 > th dose independent rect. 8 8
152 88.19 precipitation 0.1 270 < th dose independent rect. 4 15
153 88.19 precipitation 0.1 270 < th dose dependent rect. 4 15
157 88.34 wind 1.0 270 > th dose independent rect. 9 6
158 88.37 atmosphere 995.0 270 > th dose independent rect. 15 18
159 88.38 wind 1.0 270 > th dose independent rect. 14 7
180 89.03 precipitation 0.1 270 < th dose independent rect. 15 18
181 89.03 precipitation 0.1 270 < th dose dependent rect. 15 18
219 89.63 humidity 90.0 270 < th dose independent rect. 15 5
225 89.78 precipitation 0.1 270 < th dose independent rect. 14 7
227 89.78 precipitation 0.1 270 < th dose dependent rect. 14 7
257 90.19 atmosphere 995.0 270 > th dose independent rect. 15 6
260 90.20 humidity 50.0 270 > th dose independent rect. 21 17
294 90.60 humidity 50.0 270 > th dose independent rect. 2 8
295 90.62 atmosphere 995.0 270 > th dose independent rect. 4 16
296 90.66 temperature 10.0 270 > th dose independent rect. 2 8
297 90.66 atmosphere 995.0 270 > th dose independent rect. 2 8
298 90.66 atmosphere 1015.0 270 < th dose independent rect. 2 8
299 90.66 temperature 10.0 270 > th dose independent rect. 10 16
304 90.71 wind 9.0 270 < th dose independent rect. 2 8
313 90.77 radiation 1.0 270 < th dose dependent sin 12 NA
319 90.91 precipitation 0.1 270 < th dose independent rect. 10 16
320 90.91 precipitation 0.1 270 < th dose dependent rect. 10 16
332 91.05 wind 1.0 270 > th dose independent rect. 20 8
333 91.05 humidity 50.0 270 > th dose independent rect. 8 8
337 91.11 humidity 50.0 270 > th dose independent rect. 9 6
340 91.17 wind 9.0 270 < th dose independent rect. 10 16
390 91.67 precipitation 0.1 270 < th dose independent rect. 19 21
391 91.67 precipitation 0.1 270 < th dose dependent rect. 19 21
394 91.76 precipitation 0.1 10 < th dose independent rect. 10 8
395 91.76 precipitation 0.1 10 < th dose dependent rect. 10 8
399 91.81 wind 9.0 270 < th dose independent rect. 16 3
401 91.82 temperature 10.0 10 > th dose independent rect. 10 8
403 91.82 atmosphere 1015.0 10 < th dose independent rect. 10 8
404 91.82 temperature 10.0 10 > th dose independent rect. 18 16
405 91.82 humidity 50.0 10 > th dose independent rect. 18 16
409 91.84 precipitation 0.1 270 < th dose independent rect. 2 8
410 91.84 precipitation 0.1 270 < th dose dependent rect. 2 8
414 91.88 atmosphere 995.0 10 > th dose independent rect. 18 16
421 91.92 wind 9.0 10 < th dose independent rect. 18 16
424 91.97 radiation 30.0 270 < th dose independent rect. 16 3
425 91.98 wind 9.0 10 < th dose independent rect. 10 8
435 92.05 humidity 90.0 270 < th dose independent rect. 9 6
439 92.11 temperature 10.0 270 > th dose independent rect. 16 3
441 92.11 atmosphere 1010.0 270 < th dose independent rect. 16 3
445 92.11 temperature 10.0 270 > th dose independent rect. 19 21
449 92.16 atmosphere 995.0 270 > th dose independent rect. 10 4
464 92.23 radiation 1.0 270 > th dose independent rect. 16 16
479 92.35 wind 9.0 270 < th dose independent rect. 19 21
493 92.53 radiation 1.0 270 < th dose independent sin 12 NA
503 92.88 humidity 90.0 270 < th dose independent rect. 10 4
530 93.11 precipitation 0.1 10 < th dose independent rect. 18 16
531 93.11 precipitation 0.1 10 < th dose dependent rect. 18 16
532 93.13 wind 1.0 270 > th dose independent rect. 16 3
541 93.17 precipitation 0.1 270 < th dose independent rect. 16 3
542 93.17 precipitation 0.1 270 < th dose dependent rect. 16 3
552 93.25 atmosphere 995.0 270 > th dose independent rect. 16 3
578 93.57 atmosphere 1015.0 270 < th dose independent rect. 21 17
593 93.72 atmosphere 995.0 270 > th dose independent rect. 19 21
648 93.98 atmosphere 1015.0 270 < th dose independent rect. 15 18
653 94.01 precipitation 0.1 10 < th dose independent rect. 16 7
654 94.01 precipitation 0.1 10 < th dose dependent rect. 16 7
669 94.28 wind 1.0 270 > th dose independent rect. 10 4
674 94.28 radiation 40.0 270 < th dose dependent rect. 16 16
675 94.30 wind 1.0 270 > th dose independent rect. 21 18
714 94.59 atmosphere 1015.0 270 < th dose independent rect. 16 16
754 94.83 atmosphere 995.0 10 > th dose independent rect. 10 8
756 94.84 wind 1.0 10 > th dose independent rect. 16 7
780 94.98 wind 1.0 270 > th dose independent rect. 10 16
789 95.06 humidity 50.0 270 > th dose independent rect. 19 21
797 95.11 radiation 40.0 10 < th dose dependent rect. 16 7
800 95.12 temperature 10.0 10 > th dose independent rect. 16 7
802 95.12 atmosphere 1010.0 10 < th dose independent rect. 16 7
804 95.12 radiation 40.0 10 < th dose independent rect. 16 7
805 95.12 temperature 10.0 10 > th dose independent rect. 23 17
830 95.19 atmosphere 995.0 10 > th dose independent rect. 16 7
840 95.28 wind 9.0 10 < th dose independent rect. 23 17
844 95.31 radiation 1.0 270 > th dose independent sin 12 NA
852 95.32 wind 1.0 10 > th dose independent rect. 10 8
873 95.41 precipitation 0.1 10 < th dose independent rect. 16 18
875 95.41 precipitation 0.1 10 < th dose dependent rect. 16 18
880 95.45 humidity 50.0 270 > th dose independent rect. 10 4
881 95.45 radiation 40.0 270 < th dose independent rect. 2 8
887 95.49 temperature 10.0 1440 > th dose independent rect. 11 6
892 95.49 temperature 10.0 1440 > th dose independent rect. 17 18
902 95.55 temperature 30.0 270 < th dose independent rect. 2 8
964 95.89 atmosphere 995.0 10 > th dose independent rect. 23 17
967 95.94 wind 9.0 270 < th dose dependent rect. 9 6