BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0150500 Os07g0150500|AK073749
         (943 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os07g0150500  Zinc finger, C3HC-like domain containing protein   1776   0.0  
Os03g0785300  Conserved hypothetical protein                      165   1e-40

>Os07g0150500 Zinc finger, C3HC-like domain containing protein
          Length = 943

 Score = 1776 bits (4599), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 875/943 (92%), Positives = 875/943 (92%)

Query: 1   MREEVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTNAASIDWLGGEPISKVESSS 60
           MREEVR                                QTNAASIDWLGGEPISKVESSS
Sbjct: 1   MREEVRSSSAAPPDPPPRSASPPATPVASSAGASSPPAQTNAASIDWLGGEPISKVESSS 60

Query: 61  QIAPHAPRPSLSTNAAGAAVDFSQPSCRPWERGDLLRRLATFKSSTWASKPKAASSLACA 120
           QIAPHAPRPSLSTNAAGAAVDFSQPSCRPWERGDLLRRLATFKSSTWASKPKAASSLACA
Sbjct: 61  QIAPHAPRPSLSTNAAGAAVDFSQPSCRPWERGDLLRRLATFKSSTWASKPKAASSLACA 120

Query: 121 RRGWVNIEMDKIACESCGAHLIFTALTSWSPAEVANAGEAFAEQLDASHLGDCPWRGNSC 180
           RRGWVNIEMDKIACESCGAHLIFTALTSWSPAEVANAGEAFAEQLDASHLGDCPWRGNSC
Sbjct: 121 RRGWVNIEMDKIACESCGAHLIFTALTSWSPAEVANAGEAFAEQLDASHLGDCPWRGNSC 180

Query: 181 ADSLVQFHLTPSALVGGFKDRCDGLLQFISLPVIAKSAIESMKLTRSPQIDRVLSQAITI 240
           ADSLVQFHLTPSALVGGFKDRCDGLLQFISLPVIAKSAIESMKLTRSPQIDRVLSQAITI
Sbjct: 181 ADSLVQFHLTPSALVGGFKDRCDGLLQFISLPVIAKSAIESMKLTRSPQIDRVLSQAITI 240

Query: 241 LSGELGYKTDSTTGIDINHQDESCSYSQAQKLISLCGWEPRWLPNVQDWEENSTRSAKHT 300
           LSGELGYKTDSTTGIDINHQDESCSYSQAQKLISLCGWEPRWLPNVQDWEENSTRSAKHT
Sbjct: 241 LSGELGYKTDSTTGIDINHQDESCSYSQAQKLISLCGWEPRWLPNVQDWEENSTRSAKHT 300

Query: 301 ASADPDQIHSRLPEHKQNSYSASXXXXXXXXXXXXXXSGCSMRSPLLDCSLCGATVRIWD 360
           ASADPDQIHSRLPEHKQNSYSAS              SGCSMRSPLLDCSLCGATVRIWD
Sbjct: 301 ASADPDQIHSRLPEHKQNSYSASVKKDKGKGKIHVKDSGCSMRSPLLDCSLCGATVRIWD 360

Query: 361 FRSVPRPSHLSINNIDAPDMRKGVLTRGISATSGINGWVAEGTERENVEGRGEAGTDEGK 420
           FRSVPRPSHLSINNIDAPDMRKGVLTRGISATSGINGWVAEGTERENVEGRGEAGTDEGK
Sbjct: 361 FRSVPRPSHLSINNIDAPDMRKGVLTRGISATSGINGWVAEGTERENVEGRGEAGTDEGK 420

Query: 421 SLSNAQVDLNLTMAGGLPSTHSVMPSMHDHFNDGGMGRDLMIGQPTGSELGGFAASFESR 480
           SLSNAQVDLNLTMAGGLPSTHSVMPSMHDHFNDGGMGRDLMIGQPTGSELGGFAASFESR
Sbjct: 421 SLSNAQVDLNLTMAGGLPSTHSVMPSMHDHFNDGGMGRDLMIGQPTGSELGGFAASFESR 480

Query: 481 GPSSRKRNLEEGGSTADKPLNRLHPADSIEGTVIDRDGDEVDDGAQDSDIRSNKRPRGFN 540
           GPSSRKRNLEEGGSTADKPLNRLHPADSIEGTVIDRDGDEVDDGAQDSDIRSNKRPRGFN
Sbjct: 481 GPSSRKRNLEEGGSTADKPLNRLHPADSIEGTVIDRDGDEVDDGAQDSDIRSNKRPRGFN 540

Query: 541 LFDVNQPSSSGAGPSRNLSFDLDIDVNKFDTYKAEGPSALHNPSASMRASSVIAMDTVHS 600
           LFDVNQPSSSGAGPSRNLSFDLDIDVNKFDTYKAEGPSALHNPSASMRASSVIAMDTVHS
Sbjct: 541 LFDVNQPSSSGAGPSRNLSFDLDIDVNKFDTYKAEGPSALHNPSASMRASSVIAMDTVHS 600

Query: 601 AEENSTESVEYHPCDVDDVHKPSSAVRSGGMSEALDLNYSNQAPQSSFVQPAAESNAREI 660
           AEENSTESVEYHPCDVDDVHKPSSAVRSGGMSEALDLNYSNQAPQSSFVQPAAESNAREI
Sbjct: 601 AEENSTESVEYHPCDVDDVHKPSSAVRSGGMSEALDLNYSNQAPQSSFVQPAAESNAREI 660

Query: 661 GGSSMNGGEEVLNAETAPAFARDQXXXXXXXXXXXMGASHEAEIHGVDVSEHKTDSVVGD 720
           GGSSMNGGEEVLNAETAPAFARDQ           MGASHEAEIHGVDVSEHKTDSVVGD
Sbjct: 661 GGSSMNGGEEVLNAETAPAFARDQLSLGVSGGSVGMGASHEAEIHGVDVSEHKTDSVVGD 720

Query: 721 VEPAPELTENMGNTGESAPGPGMMDEFVPEDVGREEPQGDSQDVASRLVGRADSGSKICG 780
           VEPAPELTENMGNTGESAPGPGMMDEFVPEDVGREEPQGDSQDVASRLVGRADSGSKICG
Sbjct: 721 VEPAPELTENMGNTGESAPGPGMMDEFVPEDVGREEPQGDSQDVASRLVGRADSGSKICG 780

Query: 781 STKADSVESGEKMSHGIGHESNLQHSLSRNARVYSGIDLSKDEVTQIAKLPANDDYDPGD 840
           STKADSVESGEKMSHGIGHESNLQHSLSRNARVYSGIDLSKDEVTQIAKLPANDDYDPGD
Sbjct: 781 STKADSVESGEKMSHGIGHESNLQHSLSRNARVYSGIDLSKDEVTQIAKLPANDDYDPGD 840

Query: 841 DLAANGGNDYEAGLPEFDPISHHNNYCPWVNGHVAAACCINXXXXXXXXXXXWQLTVDAL 900
           DLAANGGNDYEAGLPEFDPISHHNNYCPWVNGHVAAACCIN           WQLTVDAL
Sbjct: 841 DLAANGGNDYEAGLPEFDPISHHNNYCPWVNGHVAAACCINTGSSTSTGLSGWQLTVDAL 900

Query: 901 ETIQSLAQAQNQIMPSDSAASLYKDDHVAPSRKLLKRASHSKC 943
           ETIQSLAQAQNQIMPSDSAASLYKDDHVAPSRKLLKRASHSKC
Sbjct: 901 ETIQSLAQAQNQIMPSDSAASLYKDDHVAPSRKLLKRASHSKC 943



>Os03g0785300 Conserved hypothetical protein
          Length = 153

 Score =  165 bits (418), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 89/150 (59%), Positives = 102/150 (68%), Gaps = 12/150 (8%)

Query: 806 SLSRNARVYSGIDLSKDEVTQIAKL------PANDDYDPGDDLAA-NGGNDYEAGLPEFD 858
           SLS NA + +G+D+SK+EVTQ  KL      P   DYDP + L A NG ND+E+GLPEFD
Sbjct: 4   SLSCNAGMQTGLDVSKEEVTQAGKLLIAGDVPMGLDYDPQNGLGATNGENDFESGLPEFD 63

Query: 859 PISHHNNYCPWVNGHVAAACCINXXXXXXXX-XXXWQLTVDALETIQSLAQAQNQIMPSD 917
           P+ HHN+YCPWVNG VAAACC N            WQLTVDAL+T QSL QAQN  M SD
Sbjct: 64  PVKHHNSYCPWVNGTVAAACCSNTESSSSSSPLSGWQLTVDALDTFQSLGQAQNHAMRSD 123

Query: 918 SAASLYKDDHVAPSRKLLKRA----SHSKC 943
           SAASLY DDHV P+ KL +RA    SH KC
Sbjct: 124 SAASLYMDDHVTPNHKLARRASVSRSHGKC 153



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.311    0.128    0.378 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 33,047,550
Number of extensions: 1516706
Number of successful extensions: 3320
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3319
Number of HSP's successfully gapped: 2
Length of query: 943
Length of database: 17,035,801
Length adjustment: 110
Effective length of query: 833
Effective length of database: 11,292,261
Effective search space: 9406453413
Effective search space used: 9406453413
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 161 (66.6 bits)