Os03g0785300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0785300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 14.7 | 0.18 | 11 | 0.847 | 0.0279 | -0.985 | 0.333 | 1.43 | 0.256 | 4.72 | 20.83 | 145 | -- | -- |
| 15.95 | 0.186 | 11 | 0.604 | 0.0481 | -0.92 | -0.0614 | -- | 0.185 | 4.36 | 19.72 | 159 | -- | -- |
| 14.88 | 0.18 | 11 | 0.808 | 0.0193 | -0.983 | -- | 1.25 | 0.242 | 2.99 | 21.45 | 160 | -- | -- |
| 15.96 | 0.186 | 11 | 0.596 | 0.0476 | -0.909 | -- | -- | 0.184 | 4.45 | 19.72 | 159 | -- | -- |
| 14.89 | 0.18 | 11 | 0.816 | -- | -0.999 | -- | 1.28 | 0.245 | -- | 21.55 | 159 | -- | -- |
| 28.98 | 0.252 | 11.1 | 0.393 | 0.387 | -- | 0.162 | -- | 0.0309 | 3.92 | -- | -- | -- | -- |
| 29.05 | 0.252 | 11.1 | 0.391 | 0.388 | -- | -- | -- | 0.03 | 3.89 | -- | -- | -- | -- |
| 16.05 | 0.187 | 11 | 0.605 | -- | -0.945 | -- | -- | 0.19 | -- | 19.87 | 157 | -- | -- |
| 24.29 | 0.23 | 11.1 | -- | 0.116 | -0.698 | -- | -- | 0.0779 | 4.31 | 22.41 | 122 | -- | -- |
| 37.32 | 0.285 | 11.1 | 0.407 | -- | -- | -- | -- | 0.0404 | -- | -- | -- | -- | -- |
| 33.08 | 0.269 | 11.1 | -- | 0.396 | -- | -- | -- | -0.0135 | 3.88 | -- | -- | -- | -- |
| 24.73 | 0.232 | 11.1 | -- | -- | -0.791 | -- | -- | 0.0862 | -- | 22.88 | 131 | -- | -- |
| 41.68 | 0.301 | 11.1 | -- | -- | -- | -- | -- | -0.00475 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 13.30 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 2 | 13.64 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 3 | 13.65 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 7 | 14.25 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 13 | 14.45 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 14 | 14.45 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 16 | 14.50 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 19 | 14.59 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 21 | 14.67 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 6 |
| 24 | 14.75 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 5 | 16 |
| 25 | 14.76 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 7 | 15 |
| 38 | 14.80 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 61 | 14.86 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 62 | 14.87 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 16 | 5 |
| 63 | 14.87 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 5 | 11 |
| 67 | 14.88 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 15 | 7 |
| 73 | 14.89 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 20 | NA |
| 100 | 14.92 | wind | 5.0 | 43200 | < th | dose independent | rect. | 5 | 12 |
| 105 | 14.94 | wind | 5.0 | 43200 | > th | dose independent | rect. | 5 | 12 |
| 106 | 14.94 | temperature | 20.0 | 90 | > th | dose dependent | no | NA | NA |
| 117 | 14.95 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 4 | 13 |
| 135 | 14.98 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 137 | 14.98 | wind | 5.0 | 43200 | > th | dose independent | rect. | 5 | 17 |
| 164 | 15.01 | wind | 5.0 | 43200 | > th | dose dependent | sin | 23 | NA |
| 187 | 15.04 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 189 | 15.04 | wind | 5.0 | 43200 | < th | dose independent | rect. | 5 | 17 |
| 202 | 15.04 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 229 | 15.06 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 241 | 15.07 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 3 | 23 |
| 246 | 15.08 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 280 | 15.10 | temperature | 20.0 | 1440 | > th | dose dependent | no | NA | NA |
| 304 | 15.11 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 10 | 23 |
| 328 | 15.12 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 329 | 15.12 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 330 | 15.12 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 338 | 15.13 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 349 | 15.14 | wind | 5.0 | 43200 | > th | dose independent | sin | 0 | NA |
| 443 | 15.19 | wind | 7.0 | 43200 | > th | dose independent | rect. | 23 | 22 |
| 460 | 15.20 | wind | 5.0 | 43200 | < th | dose independent | sin | 0 | NA |
| 482 | 15.21 | wind | 7.0 | 43200 | < th | dose independent | rect. | 23 | 22 |
| 514 | 15.22 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 10 | 22 |
| 560 | 15.25 | wind | 5.0 | 43200 | > th | dose independent | rect. | 9 | 7 |
| 718 | 15.32 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 13 | 23 |
| 720 | 15.33 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 6 |
| 756 | 15.35 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 788 | 15.36 | wind | 5.0 | 43200 | > th | dose dependent | no | NA | NA |
| 828 | 15.37 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 19 | 23 |
| 829 | 15.38 | wind | 5.0 | 43200 | < th | dose independent | rect. | 9 | 7 |
| 865 | 15.39 | wind | 7.0 | 43200 | > th | dose independent | rect. | 20 | 20 |
| 868 | 15.39 | wind | 5.0 | 43200 | > th | dose independent | rect. | 9 | 22 |
| 873 | 15.39 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 8 |
| 892 | 15.40 | wind | 5.0 | 43200 | < th | dose independent | rect. | 9 | 23 |
| 935 | 15.41 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 993 | 15.44 | wind | 7.0 | 43200 | > th | dose independent | rect. | 23 | 17 |