BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0614300 Os06g0614300|AK070178
(581 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0614300 Cyclase-associated protein domain containing p... 1016 0.0
Os02g0194800 Cyclase-associated protein domain containing p... 784 0.0
>Os06g0614300 Cyclase-associated protein domain containing protein
Length = 581
Score = 1016 bits (2627), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/549 (90%), Positives = 496/549 (90%)
Query: 33 LRPRRVAFEHGLLPIPKLVFPEGTLTQTLAQTKERLIXXXXXXXXXXXXPRVGAAALAEA 92
LRPRRVAFEHGLLPIPKLVFPEGTLTQTLAQTKERLI PRVGAAALAEA
Sbjct: 33 LRPRRVAFEHGLLPIPKLVFPEGTLTQTLAQTKERLIAAAGGDGDASAAPRVGAAALAEA 92
Query: 93 LQIPREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLYIQSYKRLVPRAHKDSPAVTDVW 152
LQIPRE FLYIQSYKRLVPRAHKDSPAVTDVW
Sbjct: 93 LQIPRELAALVLGTLAAVLPAEEEAEDADLRDVLLFLYIQSYKRLVPRAHKDSPAVTDVW 152
Query: 153 PSTSAFDGYLSALSPIQLVRSNSRRFMPSQADEEAHQLSYLQKHMVNILSLLADSVDGEG 212
PSTSAFDGYLSALSPIQLVRSNSRRFMPSQADEEAHQLSYLQKHMVNILSLLADSVDGEG
Sbjct: 153 PSTSAFDGYLSALSPIQLVRSNSRRFMPSQADEEAHQLSYLQKHMVNILSLLADSVDGEG 212
Query: 213 DESMVLTAETFEHLGFLFQFSEGTPLSQVATFFANSXXXXXXXXXXXXQVHDWILQNIAA 272
DESMVLTAETFEHLGFLFQFSEGTPLSQVATFFANS QVHDWILQNIAA
Sbjct: 213 DESMVLTAETFEHLGFLFQFSEGTPLSQVATFFANSDPDMPAAPVPAAQVHDWILQNIAA 272
Query: 273 SLENTAEKLTAKENSQQSASDPDVTMAEAVTNSRIHSSSPTGTAVPNNQGHYRNTTFLEG 332
SLENTAEKLTAKENSQQSASDPDVTMAEAVTNSRIHSSSPTGTAVPNNQGHYRNTTFLEG
Sbjct: 273 SLENTAEKLTAKENSQQSASDPDVTMAEAVTNSRIHSSSPTGTAVPNNQGHYRNTTFLEG 332
Query: 333 FSKTSVVKQASDIKGHSIKVLNCHDSVIYILAPVKYATVYGCSDTTIVLGAVGKVVKVEH 392
FSKTSVVKQASDIKGHSIKVLNCHDSVIYILAPVKYATVYGCSDTTIVLGAVGKVVKVEH
Sbjct: 333 FSKTSVVKQASDIKGHSIKVLNCHDSVIYILAPVKYATVYGCSDTTIVLGAVGKVVKVEH 392
Query: 393 CERVQIIAASKRICIANCRECIFYLGVNHQPLIVGDNHKLQVAPFNTYYPQLGEHLVQVG 452
CERVQIIAASKRICIANCRECIFYLGVNHQPLIVGDNHKLQVAPFNTYYPQLGEHLVQVG
Sbjct: 393 CERVQIIAASKRICIANCRECIFYLGVNHQPLIVGDNHKLQVAPFNTYYPQLGEHLVQVG 452
Query: 453 VDSNINKWDQPFVLGVVDPHDSLSHPAGVSDVQAESATCLDPDLFTNFLIPSWFEAQGPT 512
VDSNINKWDQPFVLGVVDPHDSLSHPAGVSDVQAESATCLDPDLFTNFLIPSWFEAQGPT
Sbjct: 453 VDSNINKWDQPFVLGVVDPHDSLSHPAGVSDVQAESATCLDPDLFTNFLIPSWFEAQGPT 512
Query: 513 KYNPFTLPEVYWASQRKKHVSLEDIQKNIRELELDDTRKKELASALHAQFKDWLYASGNI 572
KYNPFTLPEVYWASQRKKHVSLEDIQKNIRELELDDTRKKELASALHAQFKDWLYASGNI
Sbjct: 513 KYNPFTLPEVYWASQRKKHVSLEDIQKNIRELELDDTRKKELASALHAQFKDWLYASGNI 572
Query: 573 RQLYCLQGE 581
RQLYCLQGE
Sbjct: 573 RQLYCLQGE 581
>Os02g0194800 Cyclase-associated protein domain containing protein
Length = 579
Score = 784 bits (2024), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/552 (73%), Positives = 439/552 (79%), Gaps = 21/552 (3%)
Query: 39 AFEHGLLPIPKLVFPEGTLTQTLAQTKERLIXXXXXXXXXXXXPRVGAAALAEALQIPRE 98
AFEHGLLPIPKL+FPEGTL TLAQ K++L RV AAALAEALQIP E
Sbjct: 40 AFEHGLLPIPKLIFPEGTLAHTLAQVKDKLASAADGGG------RVAAAALAEALQIPHE 93
Query: 99 XXXXXXXXXXXX------XXXXXXXXXXXXXXXXXFLYIQSYKRLVPRAHKDSPAVTDVW 152
FLYIQSYKRLVPRAHKDSPAVTDVW
Sbjct: 94 QAALALATLAAVLPADDPALDSGGGGRADLRDVLLFLYIQSYKRLVPRAHKDSPAVTDVW 153
Query: 153 PSTSAFDGYLSALSPIQLVRSNSRRFMPSQADEEAHQLSYLQKHMVNILSLLADSVDGEG 212
PSTSAFDGYLSALSPIQLVRSNSRRFMPSQADEE HQLSYLQKHM NIL+LLADSV+GEG
Sbjct: 154 PSTSAFDGYLSALSPIQLVRSNSRRFMPSQADEEIHQLSYLQKHMANILTLLADSVEGEG 213
Query: 213 DESMVLTAETFEHLGFLFQFSEGTPLSQVATFFANSXXXXXXXXXXXXQVHDWILQNIAA 272
D+S+VLT ETFEHLGFL +FSEGTPLSQ ATFFANS QVHDWI QNI+A
Sbjct: 214 DDSLVLTMETFEHLGFLLKFSEGTPLSQAATFFANSDPDMPAAPVPAAQVHDWISQNISA 273
Query: 273 SLENTAEKLTAKENSQQSASDPDVTMAEA-VTNSRIHSSSPTGTAVPNNQGHYRNTTFLE 331
SLE + EK +KE SQQ SD DVTMA+A +N+R +S+PTGT N +YRNTTF+E
Sbjct: 274 SLEFSTEKSISKEVSQQVTSDIDVTMADANASNAR--NSTPTGT----NPAYYRNTTFVE 327
Query: 332 GFSKTSVVKQASDIKGHSIKVLNCHDSVIYILAPVKYATVYGCSDTTIVLGAVGKVVKVE 391
GFSKTSVVK ASD+KGHS+KVLNCH+SVIYILAP+KYATVYGCSD T+VLGA+GKVVKVE
Sbjct: 328 GFSKTSVVKHASDVKGHSVKVLNCHESVIYILAPLKYATVYGCSDATVVLGAIGKVVKVE 387
Query: 392 HCERVQIIAASKRICIANCRECIFYLGVNHQPLIVGDNHKLQVAPFNTYYPQLGEHLVQV 451
HCERV IIAA+K ICIANCRECIFYLGVNHQPLIVGDNHKLQVAPFNTYYPQLGEHL +V
Sbjct: 388 HCERVHIIAAAKWICIANCRECIFYLGVNHQPLIVGDNHKLQVAPFNTYYPQLGEHLAKV 447
Query: 452 GVDSNINKWDQPFVLGVVDPHDSLSHPAGVSDVQAESATCLDPDLFTNFLIPSWF--EAQ 509
GVD INKWDQPFVLGVVDPHDSLSHPAGVSDVQAESA LDPDLFTNF+IPSWF E Q
Sbjct: 448 GVDPAINKWDQPFVLGVVDPHDSLSHPAGVSDVQAESAARLDPDLFTNFMIPSWFGTEVQ 507
Query: 510 GPTKYNPFTLPEVYWASQRKKHVSLEDIQKNIRELELDDTRKKELASALHAQFKDWLYAS 569
PTK PF LPE+Y ASQ KK +LEDI++ IREL++DD RKKEL +ALHAQFKDWLYAS
Sbjct: 508 EPTKCCPFPLPEIYCASQSKKLAALEDIRRTIRELQIDDNRKKELTNALHAQFKDWLYAS 567
Query: 570 GNIRQLYCLQGE 581
GNIRQLYCLQG+
Sbjct: 568 GNIRQLYCLQGD 579
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.132 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 16,096,599
Number of extensions: 602406
Number of successful extensions: 1423
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 1419
Number of HSP's successfully gapped: 3
Length of query: 581
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 475
Effective length of database: 11,501,117
Effective search space: 5463030575
Effective search space used: 5463030575
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 159 (65.9 bits)