Os02g0194800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclase-associated protein domain containing protein.
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Os02g0194800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclase-associated protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27.48 | 0.246 | 11.2 | 1.21 | 0.0879 | -0.206 | 0.189 | 1.9 | 0.54 | 4.4 | 21.4 | 3862 | -- | -- |
| 29.51 | 0.253 | 11.2 | 1.02 | 0.11 | -0.688 | 0.252 | -- | 0.392 | 3.8 | 12.55 | 17771 | -- | -- |
| 27.51 | 0.244 | 11.2 | 1.22 | 0.0909 | -0.207 | -- | 1.92 | 0.54 | 3.15 | 21.4 | 3885 | -- | -- |
| 28.8 | 0.25 | 11.2 | 1.02 | 0.0805 | -0.755 | -- | -- | 0.441 | 3.57 | 12.9 | 27227 | -- | -- |
| 27.99 | 0.246 | 11.2 | 1.22 | -- | -0.196 | -- | 1.93 | 0.541 | -- | 21.36 | 3885 | -- | -- |
| 37.4 | 0.287 | 11.3 | 0.509 | 0.0735 | -- | 0.322 | -- | 0.295 | 4.79 | -- | -- | -- | -- |
| 37.63 | 0.287 | 11.3 | 0.508 | 0.0787 | -- | -- | -- | 0.293 | 3.45 | -- | -- | -- | -- |
| 29.14 | 0.251 | 11.2 | 1.11 | -- | -0.791 | -- | -- | 0.463 | -- | 12.8 | 27223 | -- | -- |
| 44.29 | 0.31 | 11.3 | -- | 0.0919 | -0.106 | -- | -- | 0.245 | 3.63 | 14.5 | 9514 | -- | -- |
| 37.98 | 0.288 | 11.3 | 0.511 | -- | -- | -- | -- | 0.295 | -- | -- | -- | -- | -- |
| 44.42 | 0.312 | 11.3 | -- | 0.0887 | -- | -- | -- | 0.237 | 3.43 | -- | -- | -- | -- |
| 43.94 | 0.309 | 11.3 | -- | -- | 0.227 | -- | -- | 0.243 | -- | 10.8 | 12098 | -- | -- |
| 44.86 | 0.313 | 11.3 | -- | -- | -- | -- | -- | 0.238 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 26.74 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 2 | 26.78 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 3 | 26.87 | temperature | 20 | 720 | > th | dose dependent | sin | 9 | NA |
| 4 | 26.87 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 3 |
| 6 | 26.96 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 7 | 26.98 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 14 |
| 9 | 27.01 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 27 | 27.15 | temperature | 25 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 40 | 27.23 | temperature | 25 | 4320 | < th | dose independent | rect. | 12 | 1 |
| 54 | 27.33 | temperature | 25 | 4320 | < th | dose independent | rect. | 11 | 3 |
| 55 | 27.33 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 2 |
| 70 | 27.39 | humidity | 90 | 14400 | > th | dose independent | rect. | 22 | 3 |
| 89 | 27.44 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 12 |
| 140 | 27.58 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 152 | 27.59 | temperature | 20 | 1440 | > th | dose dependent | sin | 14 | NA |
| 170 | 27.62 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 11 |
| 176 | 27.64 | temperature | 25 | 720 | < th | dose dependent | sin | 9 | NA |
| 190 | 27.65 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 15 |
| 201 | 27.67 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 221 | 27.70 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 6 |
| 232 | 27.72 | humidity | 90 | 14400 | > th | dose independent | rect. | 20 | 8 |
| 247 | 27.73 | humidity | 90 | 14400 | > th | dose dependent | sin | 7 | NA |
| 315 | 27.81 | humidity | 90 | 14400 | > th | dose dependent | rect. | 13 | 17 |
| 335 | 27.83 | humidity | 90 | 14400 | > th | dose dependent | rect. | 16 | 15 |
| 367 | 27.86 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 12 |
| 392 | 27.88 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 14 |
| 412 | 27.89 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 443 | 27.92 | temperature | 20 | 720 | > th | dose independent | sin | 8 | NA |
| 444 | 27.92 | temperature | 20 | 4320 | > th | dose independent | sin | 13 | NA |
| 467 | 27.93 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 15 |
| 505 | 27.95 | temperature | 20 | 4320 | < th | dose independent | sin | 13 | NA |
| 507 | 27.95 | humidity | 90 | 14400 | > th | dose independent | rect. | 22 | 11 |
| 527 | 27.96 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 528 | 27.96 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 569 | 27.99 | humidity | 90 | 14400 | > th | dose independent | sin | 11 | NA |
| 574 | 27.99 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 10 |
| 714 | 28.06 | humidity | 90 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 847 | 28.12 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 875 | 28.13 | humidity | 90 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 901 | 28.14 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 923 | 28.15 | temperature | 20 | 4320 | > th | dose dependent | rect. | 12 | 2 |
| 979 | 28.17 | humidity | 90 | 43200 | > th | dose dependent | rect. | 10 | 5 |