BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os06g0264700 Os06g0264700|J100028B14
         (129 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os06g0264700  Acylphosphatase domain containing protein           159   4e-40
Os06g0264600  Similar to Acylphosphatase (EC 3.6.1.7)             117   2e-27

>Os06g0264700 Acylphosphatase domain containing protein
          Length = 129

 Score =  159 bits (403), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 89/129 (68%), Positives = 89/129 (68%)

Query: 1   MFPSATAPRLALTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDWTVET 60
           MFPSATAPRLALTP                                        DWTVET
Sbjct: 1   MFPSATAPRLALTPRSVAAARRAMASAATPQPSPPSPKAVRVVVKGRVQGVFFRDWTVET 60

Query: 61  ARALGLAGWVRNRRDGTVEALLSGDPARVDEMVSRHLPVGPRAAAVTAVLPSPADPVDPA 120
           ARALGLAGWVRNRRDGTVEALLSGDPARVDEMVSRHLPVGPRAAAVTAVLPSPADPVDPA
Sbjct: 61  ARALGLAGWVRNRRDGTVEALLSGDPARVDEMVSRHLPVGPRAAAVTAVLPSPADPVDPA 120

Query: 121 EGFTRKPTA 129
           EGFTRKPTA
Sbjct: 121 EGFTRKPTA 129



>Os06g0264600 Similar to Acylphosphatase (EC 3.6.1.7)
          Length = 117

 Score =  117 bits (294), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 57/69 (82%), Positives = 63/69 (91%)

Query: 55  DWTVETARALGLAGWVRNRRDGTVEALLSGDPARVDEMVSRHLPVGPRAAAVTAVLPSPA 114
           DWT ETA +LGLAGWVRNRRDGTVEALLSGDPA+VDEMVSRHLPVG  A+AVTAV+PSPA
Sbjct: 43  DWTAETAESLGLAGWVRNRRDGTVEALLSGDPAKVDEMVSRHLPVGSPASAVTAVVPSPA 102

Query: 115 DPVDPAEGF 123
           DP+ P+ GF
Sbjct: 103 DPIHPSLGF 111



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.317    0.132    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,524,422
Number of extensions: 123975
Number of successful extensions: 536
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 536
Number of HSP's successfully gapped: 2
Length of query: 129
Length of database: 17,035,801
Length adjustment: 89
Effective length of query: 40
Effective length of database: 12,388,755
Effective search space: 495550200
Effective search space used: 495550200
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 150 (62.4 bits)