Os06g0264600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Acylphosphatase (EC 3.6.1.7).
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Os06g0264600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Acylphosphatase (EC 3.6.1.7).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.84 | 0.265 | 9.71 | -0.299 | 0.576 | 1.71 | 0.623 | 1.1 | 0.0679 | 2.47 | 9.806 | 94 | -- | -- |
| 32.72 | 0.266 | 9.72 | -0.41 | 0.567 | 1.71 | 0.521 | -- | 0.0443 | 2.37 | 6.363 | 91 | -- | -- |
| 33.04 | 0.268 | 9.71 | -0.336 | 0.571 | 1.7 | -- | 0.845 | 0.074 | 2.44 | 9.133 | 102 | -- | -- |
| 32.97 | 0.267 | 9.73 | -0.465 | 0.562 | 1.7 | -- | -- | 0.0267 | 2.47 | 6.729 | 98 | -- | -- |
| 37.04 | 0.283 | 9.71 | -0.383 | -- | 1.23 | -- | 0.404 | 0.0826 | -- | 12.86 | 968 | -- | -- |
| 61.14 | 0.367 | 9.68 | -0.11 | 0.128 | -- | 0.137 | -- | 0.265 | 23.4 | -- | -- | -- | -- |
| 61.22 | 0.366 | 9.68 | -0.116 | 0.128 | -- | -- | -- | 0.265 | 23.4 | -- | -- | -- | -- |
| 37.17 | 0.284 | 9.72 | -0.463 | -- | 1.24 | -- | -- | 0.0613 | -- | 12.7 | 968 | -- | -- |
| 38.08 | 0.287 | 9.71 | -- | 0.489 | 1.47 | -- | -- | 0.105 | 2.36 | 7.291 | 98 | -- | -- |
| 62.25 | 0.369 | 9.67 | -0.112 | -- | -- | -- | -- | 0.266 | -- | -- | -- | -- | -- |
| 61.58 | 0.367 | 9.67 | -- | 0.126 | -- | -- | -- | 0.278 | 23.3 | -- | -- | -- | -- |
| 42.13 | 0.302 | 9.7 | -- | -- | 1.07 | -- | -- | 0.14 | -- | 2.131 | 910 | -- | -- |
| 62.58 | 0.369 | 9.67 | -- | -- | -- | -- | -- | 0.278 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.94 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 2 | 30.96 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 3 | 30.97 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 22 |
| 10 | 31.33 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 18 | 31.72 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 21 | 31.85 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 27 | 32.02 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 41 | 32.34 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 43 | 32.39 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 57 | 32.79 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 58 | 32.80 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 65 | 32.89 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 86 | 33.22 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 20 |
| 103 | 33.47 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 118 | 33.71 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 20 |
| 119 | 33.72 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 18 |
| 133 | 33.98 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 145 | 34.07 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 167 | 34.45 | temperature | 15 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 198 | 34.70 | temperature | 25 | 1440 | < th | dose dependent | sin | 16 | NA |
| 200 | 34.71 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 7 |
| 206 | 34.75 | temperature | 25 | 1440 | < th | dose dependent | rect. | 15 | 11 |
| 214 | 34.80 | temperature | 25 | 1440 | < th | dose dependent | rect. | 11 | 18 |
| 225 | 34.85 | temperature | 25 | 1440 | < th | dose dependent | rect. | 11 | 15 |
| 239 | 34.88 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 16 |
| 261 | 34.95 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 288 | 35.03 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 297 | 35.05 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 346 | 35.16 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 350 | 35.17 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 359 | 35.17 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 368 | 35.18 | temperature | 25 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 369 | 35.19 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 383 | 35.20 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 400 | 35.23 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 11 |
| 428 | 35.26 | temperature | 10 | 1440 | > th | dose dependent | rect. | 19 | 7 |
| 464 | 35.29 | temperature | 25 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 502 | 35.34 | temperature | 20 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 622 | 35.50 | temperature | 10 | 1440 | > th | dose dependent | sin | 12 | NA |
| 641 | 35.51 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 735 | 35.61 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 23 |