BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os06g0264600 Os06g0264600|009-083-B06
         (117 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os06g0264600  Similar to Acylphosphatase (EC 3.6.1.7)             122   5e-29
Os06g0264700  Acylphosphatase domain containing protein            97   4e-21

>Os06g0264600 Similar to Acylphosphatase (EC 3.6.1.7)
          Length = 117

 Score =  122 bits (306), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 60/77 (77%), Positives = 60/77 (77%)

Query: 41  FRDWTAETAESLGLAGWVRNRRDGTVEALLSGDPAKVDEMVSRHLXXXXXXXXXXXXXXX 100
           FRDWTAETAESLGLAGWVRNRRDGTVEALLSGDPAKVDEMVSRHL               
Sbjct: 41  FRDWTAETAESLGLAGWVRNRRDGTVEALLSGDPAKVDEMVSRHLPVGSPASAVTAVVPS 100

Query: 101 XXDPIHPSLGFEINFTV 117
             DPIHPSLGFEINFTV
Sbjct: 101 PADPIHPSLGFEINFTV 117



>Os06g0264700 Acylphosphatase domain containing protein
          Length = 129

 Score = 96.7 bits (239), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 46/71 (64%), Positives = 50/71 (70%)

Query: 41  FRDWTAETAESLGLAGWVRNRRDGTVEALLSGDPAKVDEMVSRHLXXXXXXXXXXXXXXX 100
           FRDWT ETA +LGLAGWVRNRRDGTVEALLSGDPA+VDEMVSRHL               
Sbjct: 53  FRDWTVETARALGLAGWVRNRRDGTVEALLSGDPARVDEMVSRHLPVGPRAAAVTAVLPS 112

Query: 101 XXDPIHPSLGF 111
             DP+ P+ GF
Sbjct: 113 PADPVDPAEGF 123



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.319    0.136    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 2,007,011
Number of extensions: 46668
Number of successful extensions: 105
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 104
Number of HSP's successfully gapped: 2
Length of query: 117
Length of database: 17,035,801
Length adjustment: 84
Effective length of query: 33
Effective length of database: 12,649,825
Effective search space: 417444225
Effective search space used: 417444225
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 149 (62.0 bits)