Os06g0264700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Acylphosphatase domain containing protein.
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Os06g0264700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Acylphosphatase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 117.95 | 0.51 | 10.5 | -0.631 | 2.09 | -4.18 | 2.36 | -1.52 | 0.09 | 9.98 | 30.87 | 10 | 21 | -- |
| 119.39 | 0.509 | 10.5 | -0.736 | 2.34 | -4.31 | 1.68 | -- | 0.0866 | 10.1 | 31.84 | 9 | 20.8 | -- |
| 129.02 | 0.529 | 10.5 | -0.765 | 2.19 | -4.25 | -- | 1.01 | 0.0991 | 10.1 | 31.42 | 10 | 20.8 | -- |
| 130.33 | 0.532 | 10.5 | -0.695 | 2.6 | -4.65 | -- | -- | 0.0685 | 9.85 | 32.5 | 10 | 20.9 | -- |
| 237.96 | 0.722 | 10.6 | -0.418 | -- | -2.76 | -- | -0.907 | 0.131 | -- | 28 | 10 | 23.2 | -- |
| 258.59 | 0.754 | 10.5 | -0.174 | 1.31 | -- | 2.53 | -- | 0.51 | 13.4 | -- | -- | -- | -- |
| 283.8 | 0.789 | 10.5 | -0.0856 | 1.32 | -- | -- | -- | 0.527 | 13.8 | -- | -- | -- | -- |
| 236.82 | 0.717 | 10.6 | -0.521 | -- | -2.78 | -- | -- | 0.085 | -- | 27.8 | 10 | 23.5 | -- |
| 142.42 | 0.556 | 10.5 | -- | 2.83 | -4.58 | -- | -- | 0.181 | 9.77 | 33.94 | 10 | 21 | -- |
| 389.39 | 0.922 | 10.5 | -0.14 | -- | -- | -- | -- | 0.497 | -- | -- | -- | -- | -- |
| 283.99 | 0.788 | 10.5 | -- | 1.32 | -- | -- | -- | 0.536 | 13.8 | -- | -- | -- | -- |
| 243.71 | 0.727 | 10.6 | -- | -- | -2.69 | -- | -- | 0.166 | -- | 28 | 9 | 23.7 | -- |
| 389.9 | 0.922 | 10.5 | -- | -- | -- | -- | -- | 0.512 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 118.86 | temperature | 30 | 10 | < th | dose dependent | sin | 3 | NA |
| 3 | 119.12 | temperature | 10 | 10 | > th | dose dependent | sin | 3 | NA |
| 10 | 121.97 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 21 | 125.13 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 16 |
| 51 | 132.58 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 15 |
| 58 | 133.32 | temperature | 25 | 90 | < th | dose independent | sin | 4 | NA |
| 63 | 133.86 | temperature | 25 | 90 | < th | dose independent | rect. | 1 | 16 |
| 79 | 135.25 | temperature | 25 | 90 | < th | dose independent | rect. | 3 | 14 |
| 140 | 143.64 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 18 |
| 146 | 144.08 | temperature | 25 | 90 | > th | dose independent | sin | 3 | NA |
| 151 | 144.48 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 21 |
| 217 | 149.21 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 10 |
| 238 | 151.55 | temperature | 15 | 270 | > th | dose dependent | rect. | 4 | 9 |
| 242 | 151.78 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 8 |
| 285 | 154.70 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 21 |
| 683 | 167.52 | temperature | 25 | 90 | > th | dose independent | rect. | 4 | 10 |
| 714 | 168.29 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 17 |
| 735 | 168.76 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 15 |
| 799 | 170.30 | temperature | 15 | 270 | > th | dose dependent | rect. | 20 | 15 |
| 966 | 173.93 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 14 |
| 970 | 173.98 | temperature | 25 | 90 | > th | dose independent | rect. | 23 | 15 |
| 973 | 174.03 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 19 |
| 990 | 174.37 | temperature | 25 | 90 | > th | dose independent | rect. | 19 | 23 |