BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os06g0214100 Os06g0214100|AK064799
         (333 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os06g0214100  Conserved hypothetical protein                      536   e-153
Os02g0761600  Conserved hypothetical protein                      402   e-112

>Os06g0214100 Conserved hypothetical protein
          Length = 333

 Score =  536 bits (1381), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 268/313 (85%), Positives = 268/313 (85%)

Query: 21  WCTYRRVTVAVCLGNLVAVLLVVRSLYSAPGYFASAPRRVAVKYSEEQIRLVEESIRIRR 80
           WCTYRRVTVAVCLGNLVAVLLVVRSLYSAPGYFASAPRRVAVKYSEEQIRLVEESIRIRR
Sbjct: 21  WCTYRRVTVAVCLGNLVAVLLVVRSLYSAPGYFASAPRRVAVKYSEEQIRLVEESIRIRR 80

Query: 81  AAVSVELVEAVKKLEKVFAXXXXXXXXXXXXXXQKVSYEILERMRDLGENSNTTEQREAL 140
           AAVSVELVEAVKKLEKVFA              QKVSYEILERMRDLGENSNTTEQREAL
Sbjct: 81  AAVSVELVEAVKKLEKVFAREEKRRKELPLELKQKVSYEILERMRDLGENSNTTEQREAL 140

Query: 141 ESWRLEKLKDIRSASAQNLSMSDLSNEESRMLKRALELNWRMLMDDIGLWIPVSVWHTEH 200
           ESWRLEKLKDIRSASAQNLSMSDLSNEESRMLKRALELNWRMLMDDIGLWIPVSVWHTEH
Sbjct: 141 ESWRLEKLKDIRSASAQNLSMSDLSNEESRMLKRALELNWRMLMDDIGLWIPVSVWHTEH 200

Query: 201 DDKXXXXXXXXXXXXXXXXXXXCNAQVHTDYGGAAVRWGLTHHKESXXXXXXXXXXXXKR 260
           DDK                   CNAQVHTDYGGAAVRWGLTHHKES            KR
Sbjct: 201 DDKPENEPEEEEIIAGPPLPPECNAQVHTDYGGAAVRWGLTHHKESAADCCQACLDQAKR 260

Query: 261 ARPGALKCNIWVYCPSEYGCYSPDKYEHKHQECWLKQADHPKLNFKDRYSESYRDAHPSA 320
           ARPGALKCNIWVYCPSEYGCYSPDKYEHKHQECWLKQADHPKLNFKDRYSESYRDAHPSA
Sbjct: 261 ARPGALKCNIWVYCPSEYGCYSPDKYEHKHQECWLKQADHPKLNFKDRYSESYRDAHPSA 320

Query: 321 PVVVPWMSGVITV 333
           PVVVPWMSGVITV
Sbjct: 321 PVVVPWMSGVITV 333



>Os02g0761600 Conserved hypothetical protein
          Length = 330

 Score =  402 bits (1034), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 199/315 (63%), Positives = 228/315 (72%), Gaps = 6/315 (1%)

Query: 21  WCTYRRVTVAVCLGNLVAVLLVVRSLYSAPGYFASAP--RRVAVKYSEEQIRLVEESIRI 78
           WC+YRR+TVAVCLGNLVA LLV+RSL S     A  P  R   V+Y+EEQIR  EESIRI
Sbjct: 20  WCSYRRITVAVCLGNLVAALLVLRSLTS----LAPTPPKREEVVEYTEEQIRKAEESIRI 75

Query: 79  RRAAVSVELVEAVKKLEKVFAXXXXXXXXXXXXXXQKVSYEILERMRDLGENSNTTEQRE 138
           RR A  VELVEAVK L K+F               QKVSYEI++ + DLG+NS+  +QRE
Sbjct: 76  RREAEPVELVEAVKNLRKIFRREEKRRKELPLELKQKVSYEIVQLLLDLGDNSSFAQQRE 135

Query: 139 ALESWRLEKLKDIRSASAQNLSMSDLSNEESRMLKRALELNWRMLMDDIGLWIPVSVWHT 198
           A+ESWR EKLKDI+SAS QN +  DLSNEE+R LKRAL+ NW +L++DIGLWIP  V HT
Sbjct: 136 AVESWRFEKLKDIKSASIQNSTKLDLSNEEARTLKRALQFNWHVLLEDIGLWIPSEVSHT 195

Query: 199 EHDDKXXXXXXXXXXXXXXXXXXXCNAQVHTDYGGAAVRWGLTHHKESXXXXXXXXXXXX 258
           EHDDK                   CNA++HTDY GAAVRWGLTH KES            
Sbjct: 196 EHDDKPENEPEEEEIIAGPPLPSQCNAELHTDYDGAAVRWGLTHPKESAADCCQACLDQA 255

Query: 259 KRARPGALKCNIWVYCPSEYGCYSPDKYEHKHQECWLKQADHPKLNFKDRYSESYRDAHP 318
           K ARPG L+CNIWVYCPSE+GC+SPDKYEHKHQECWLKQADHPKLNFKD+YSESYRD+HP
Sbjct: 256 KNARPGELRCNIWVYCPSEFGCFSPDKYEHKHQECWLKQADHPKLNFKDKYSESYRDSHP 315

Query: 319 SAPVVVPWMSGVITV 333
           +APVVVPWMSGVI+ 
Sbjct: 316 TAPVVVPWMSGVISA 330



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.319    0.131    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,143,312
Number of extensions: 305807
Number of successful extensions: 691
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 689
Number of HSP's successfully gapped: 2
Length of query: 333
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 232
Effective length of database: 11,762,187
Effective search space: 2728827384
Effective search space used: 2728827384
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 156 (64.7 bits)