FiT-DB / Search/ Help/ Sample detail

Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0761600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 4.74 (0.0327) R2 : 0.311
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.15 (0.0805) R2dE : 0.348 R2E : 0.275
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.294 (0.0719) R2dN8 : 0.0365 R2N8 : -0.0372
σ : 0.606
deviance : 169.13
__
_____
C
peak time of C : --
E
wheather : temperature
threshold : 25.76
memory length : 509
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
152.45 0.58 4.69 0.442 0.713 -1.54 0.386 1.24 0.475 2 25.7 843 -- --
154.18 0.578 4.73 0.142 0.722 -1.5 0.592 -- 0.356 2.17 26 877 -- --
152.69 0.576 4.68 0.499 0.749 -1.57 -- 1.5 0.502 2.3 25.8 878 -- --
155.59 0.581 4.74 0.111 0.718 -1.47 -- -- 0.334 2.35 26 877 -- --
169.34 0.606 4.74 0.00123 -- -1.13 -- 0.101 0.307 -- 25.7 492 -- --
215.06 0.688 4.82 -0.337 0.728 -- 0.152 -- -0.0979 5.46 -- -- -- --
215.12 0.687 4.82 -0.337 0.729 -- -- -- -0.0985 5.49 -- -- -- --
169.13 0.606 4.74 0.00901 -- -1.16 -- -- 0.295 -- 25.76 509 -- --
155.89 0.582 4.74 -- 0.718 -1.44 -- -- 0.314 2.41 26 877 -- --
242.77 0.728 4.83 -0.313 -- -- -- -- -0.0807 -- -- -- -- --
218.11 0.691 4.81 -- 0.724 -- -- -- -0.061 5.51 -- -- -- --
169.13 0.606 4.74 -- -- -1.15 -- -- 0.294 -- 25.76 509 -- --
245.35 0.731 4.82 -- -- -- -- -- -0.046 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 154.59 temperature 30 720 < th dose dependent rect. 9 15
3 154.94 temperature 30 270 < th dose dependent rect. 11 21
5 155.22 temperature 10 720 > th dose dependent rect. 8 18
16 156.20 temperature 30 720 < th dose dependent sin 19 NA
26 156.57 temperature 25 720 > th dose independent rect. 7 17
27 156.58 temperature 15 270 > th dose dependent rect. 7 21
51 157.24 temperature 10 720 > th dose dependent sin 19 NA
56 157.29 temperature 20 720 > th dose dependent sin 18 NA
70 157.59 temperature 20 720 > th dose dependent rect. 15 5
129 158.48 temperature 25 720 < th dose independent rect. 4 19
147 158.69 temperature 30 720 < th dose dependent rect. 13 9
175 159.09 temperature 25 720 > th dose independent sin 20 NA
184 159.24 temperature 25 720 < th dose independent rect. 7 17
240 159.98 temperature 20 720 > th dose dependent rect. 14 12
335 160.94 temperature 25 720 > th dose independent rect. 15 5
357 161.12 temperature 25 720 > th dose independent rect. 16 3
379 161.25 temperature 30 270 < th dose dependent rect. 1 23
380 161.27 temperature 15 1440 > th dose dependent rect. 13 1
391 161.34 temperature 10 720 > th dose dependent rect. 14 14
398 161.40 temperature 20 1440 > th dose dependent rect. 10 8
410 161.49 temperature 10 1440 > th dose dependent rect. 11 3
412 161.50 temperature 25 1440 > th dose dependent rect. 13 1
413 161.50 temperature 20 1440 > th dose dependent rect. 11 3
414 161.50 temperature 10 1440 > th dose dependent rect. 10 8
422 161.56 temperature 25 720 < th dose independent sin 20 NA
437 161.64 temperature 20 720 > th dose dependent rect. 14 22
487 161.90 temperature 25 720 > th dose independent rect. 14 22
519 161.99 temperature 25 720 > th dose dependent rect. 15 19
576 162.32 temperature 30 90 < th dose dependent rect. 3 23
616 162.53 temperature 20 1440 > th dose dependent rect. 11 1
661 162.78 temperature 25 720 > th dose independent no NA NA
723 163.00 temperature 10 1440 > th dose dependent rect. 17 1
739 163.07 temperature 20 720 > th dose dependent rect. 24 23
742 163.08 temperature 20 720 > th dose dependent no NA NA
794 163.28 temperature 30 1440 < th dose dependent rect. 17 1
802 163.31 temperature 30 90 < th dose dependent no NA NA
810 163.33 temperature 30 30 < th dose dependent rect. 5 23
822 163.38 temperature 25 1440 < th dose independent rect. 17 3
942 163.84 temperature 25 1440 > th dose dependent rect. 23 19
943 163.84 temperature 15 10 > th dose dependent rect. 7 23