BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0761600 Os02g0761600|AK120494
         (330 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os02g0761600  Conserved hypothetical protein                      530   e-151
Os06g0214100  Conserved hypothetical protein                      371   e-103

>Os02g0761600 Conserved hypothetical protein
          Length = 330

 Score =  530 bits (1366), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 266/330 (80%), Positives = 266/330 (80%)

Query: 1   MARGVARAASFGGRAATARWCSYRRITVAVCLGNLVAALLVLRSLTSLAPTPPKREEVVE 60
           MARGVARAASFGGRAATARWCSYRRITVAVCLGNLVAALLVLRSLTSLAPTPPKREEVVE
Sbjct: 1   MARGVARAASFGGRAATARWCSYRRITVAVCLGNLVAALLVLRSLTSLAPTPPKREEVVE 60

Query: 61  YTEEQXXXXXXXXXXXXXXXPVELVEAVKNXXXXXXXXXXXXXXXXXXXXQKVSYEIVQL 120
           YTEEQ               PVELVEAVKN                    QKVSYEIVQL
Sbjct: 61  YTEEQIRKAEESIRIRREAEPVELVEAVKNLRKIFRREEKRRKELPLELKQKVSYEIVQL 120

Query: 121 LLDLGDNSSFAQQREAVESWRFEKLKDIKSASIQNSTKLDLSNEEARTLKRALQFNWHVL 180
           LLDLGDNSSFAQQREAVESWRFEKLKDIKSASIQNSTKLDLSNEEARTLKRALQFNWHVL
Sbjct: 121 LLDLGDNSSFAQQREAVESWRFEKLKDIKSASIQNSTKLDLSNEEARTLKRALQFNWHVL 180

Query: 181 LEDIGLWIPSEVSHTEHDDKXXXXXXXXXXXXXXXXXSQCNAELHTDYDGAAVRWGLTHP 240
           LEDIGLWIPSEVSHTEHDDK                 SQCNAELHTDYDGAAVRWGLTHP
Sbjct: 181 LEDIGLWIPSEVSHTEHDDKPENEPEEEEIIAGPPLPSQCNAELHTDYDGAAVRWGLTHP 240

Query: 241 KESXXXXXXXXXXXXKNARPGELRCNIWVYCPSEFGCFSPDKYEHKHQECWLKQADHPKL 300
           KES            KNARPGELRCNIWVYCPSEFGCFSPDKYEHKHQECWLKQADHPKL
Sbjct: 241 KESAADCCQACLDQAKNARPGELRCNIWVYCPSEFGCFSPDKYEHKHQECWLKQADHPKL 300

Query: 301 NFKDKYSESYRDSHPTAPVVVPWMSGVISA 330
           NFKDKYSESYRDSHPTAPVVVPWMSGVISA
Sbjct: 301 NFKDKYSESYRDSHPTAPVVVPWMSGVISA 330



>Os06g0214100 Conserved hypothetical protein
          Length = 333

 Score =  371 bits (953), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 186/315 (59%), Positives = 215/315 (68%), Gaps = 6/315 (1%)

Query: 19  RWCSYRRITVAVCLGNLVAALLVLRSLTS----LAPTPPKREEVVEYTEEQXXXXXXXXX 74
           RWC+YRR+TVAVCLGNLVA LLV+RSL S     A  P  R   V+Y+EEQ         
Sbjct: 20  RWCTYRRVTVAVCLGNLVAVLLVVRSLYSAPGYFASAP--RRVAVKYSEEQIRLVEESIR 77

Query: 75  XXXXXXPVELVEAVKNXXXXXXXXXXXXXXXXXXXXQKVSYEIVQLLLDLGDNSSFAQQR 134
                  VELVEAVK                     QKVSYEI++ + DLG+NS+  +QR
Sbjct: 78  IRRAAVSVELVEAVKKLEKVFAREEKRRKELPLELKQKVSYEILERMRDLGENSNTTEQR 137

Query: 135 EAVESWRFEKLKDIKSASIQNSTKLDLSNEEARTLKRALQFNWHVLLEDIGLWIPSEVSH 194
           EA+ESWR EKLKDI+SAS QN +  DLSNEE+R LKRAL+ NW +L++DIGLWIP  V H
Sbjct: 138 EALESWRLEKLKDIRSASAQNLSMSDLSNEESRMLKRALELNWRMLMDDIGLWIPVSVWH 197

Query: 195 TEHDDKXXXXXXXXXXXXXXXXXSQCNAELHTDYDGAAVRWGLTHPKESXXXXXXXXXXX 254
           TEHDDK                  +CNA++HTDY GAAVRWGLTH KES           
Sbjct: 198 TEHDDKPENEPEEEEIIAGPPLPPECNAQVHTDYGGAAVRWGLTHHKESAADCCQACLDQ 257

Query: 255 XKNARPGELRCNIWVYCPSEFGCFSPDKYEHKHQECWLKQADHPKLNFKDKYSESYRDSH 314
            K ARPG L+CNIWVYCPSE+GC+SPDKYEHKHQECWLKQADHPKLNFKD+YSESYRD+H
Sbjct: 258 AKRARPGALKCNIWVYCPSEYGCYSPDKYEHKHQECWLKQADHPKLNFKDRYSESYRDAH 317

Query: 315 PTAPVVVPWMSGVIS 329
           P+APVVVPWMSGVI+
Sbjct: 318 PSAPVVVPWMSGVIT 332



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.316    0.130    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,337,758
Number of extensions: 310964
Number of successful extensions: 721
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 717
Number of HSP's successfully gapped: 2
Length of query: 330
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 229
Effective length of database: 11,762,187
Effective search space: 2693540823
Effective search space used: 2693540823
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 156 (64.7 bits)