BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os06g0213400 Os06g0213400|AK071478
         (405 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os06g0213400  Protein of unknown function DUF829, eukaryotic...   786   0.0  
Os11g0614900  Protein of unknown function DUF829, eukaryotic...   224   6e-59

>Os06g0213400 Protein of unknown function DUF829, eukaryotic family protein
          Length = 405

 Score =  786 bits (2031), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/405 (94%), Positives = 383/405 (94%)

Query: 1   MWPGCGGRFYWXXXXXXXXXXXXXXXXXXXXXXWSDEAQLRPFVELYASLGWRCLVCHPD 60
           MWPGCGGRFYW                      WSDEAQLRPFVELYASLGWRCLVCHPD
Sbjct: 1   MWPGCGGRFYWAPAPPSPSAAGARGVVVVFGWVWSDEAQLRPFVELYASLGWRCLVCHPD 60

Query: 61  LVALYLSEKAASLASGVISELVKEFKVKPLPTVFASFSGGSKGCMYKVIQLLDGNCEGDA 120
           LVALYLSEKAASLASGVISELVKEFKVKPLPTVFASFSGGSKGCMYKVIQLLDGNCEGDA
Sbjct: 61  LVALYLSEKAASLASGVISELVKEFKVKPLPTVFASFSGGSKGCMYKVIQLLDGNCEGDA 120

Query: 121 TMKDYRLVRNCICGQIYDSGPVDFFSDVGTQFLQNPMIGNSSRPSMLLSWMTKALASGMD 180
           TMKDYRLVRNCICGQIYDSGPVDFFSDVGTQFLQNPMIGNSSRPSMLLSWMTKALASGMD
Sbjct: 121 TMKDYRLVRNCICGQIYDSGPVDFFSDVGTQFLQNPMIGNSSRPSMLLSWMTKALASGMD 180

Query: 181 TLFPSRIEAQRAEYWHTLYSSAGLGPVLMLCSEDDDLAPCHVVCGFARRLIELGTDVKVI 240
           TLFPSRIEAQRAEYWHTLYSSAGLGPVLMLCSEDDDLAPCHVVCGFARRLIELGTDVKVI
Sbjct: 181 TLFPSRIEAQRAEYWHTLYSSAGLGPVLMLCSEDDDLAPCHVVCGFARRLIELGTDVKVI 240

Query: 241 KWSDSPHVGHYMLHEAEYRSAVNDTLIKALVTFCHRSQLNATSDQEYKIAHSVCSLHNVA 300
           KWSDSPHVGHYMLHEAEYRSAVNDTLIKALVTFCHRSQLNATSDQEYKIAHSVCSLHNVA
Sbjct: 241 KWSDSPHVGHYMLHEAEYRSAVNDTLIKALVTFCHRSQLNATSDQEYKIAHSVCSLHNVA 300

Query: 301 ANSNERLRRVANGPSDHFFLPSSKDHNESRDPDSLIDEQRRQLSYPPSMEPQGVLGQILF 360
           ANSNERLRRVANGPSDHFFLPSSKDHNESRDPDSLIDEQRRQLSYPPSMEPQGVLGQILF
Sbjct: 301 ANSNERLRRVANGPSDHFFLPSSKDHNESRDPDSLIDEQRRQLSYPPSMEPQGVLGQILF 360

Query: 361 DVCVPKNVEGWDIKPTVSPNGRPTLASARQLGPFNPIKYFRRSRL 405
           DVCVPKNVEGWDIKPTVSPNGRPTLASARQLGPFNPIKYFRRSRL
Sbjct: 361 DVCVPKNVEGWDIKPTVSPNGRPTLASARQLGPFNPIKYFRRSRL 405



>Os11g0614900 Protein of unknown function DUF829, eukaryotic family protein
          Length = 277

 Score =  224 bits (572), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 108/195 (55%), Positives = 143/195 (73%), Gaps = 3/195 (1%)

Query: 35  SDEAQLRPFVELYASLGWRCLVCHPDLVALYLSEKAASLASGVISELVKEFKVKPLPTVF 94
           S E Q+R +VELYA+LGW CLVCH + + L+  +KAA LA  V++ELVKE KV+P+P VF
Sbjct: 69  SQERQVRAYVELYAALGWACLVCHSEFLTLFFPDKAAMLADRVLAELVKELKVRPVPVVF 128

Query: 95  ASFSGGSKGCMYKVIQLLDGNCEGDATMKDYRLVRNCICGQIYDSGPVDFFSDVGTQFLQ 154
           ASFSGG KGC YKV+QL++  CEG  ++++Y+LVR+C+CGQ+YDS PVDF SD+GT+FL 
Sbjct: 129 ASFSGGPKGCTYKVLQLIERRCEGQLSLEEYQLVRDCLCGQMYDSSPVDFVSDLGTRFLL 188

Query: 155 NPMIGNSSRPSMLLSWMTKALASGMDTLFPSRIEAQRAEYWHTLYSSAGLGPVLMLCSED 214
           +P +   S+P  +LSWMT+ +ASG+DTLF  + EAQRAEYW TLYSS     VL   S  
Sbjct: 189 HPSVLKMSQPPRILSWMTRGIASGLDTLFIGKFEAQRAEYWDTLYSSVVCHSVL---SVT 245

Query: 215 DDLAPCHVVCGFARR 229
            +L     VCG+  +
Sbjct: 246 CNLIVNGSVCGYLSK 260



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.321    0.136    0.433 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,100,423
Number of extensions: 583033
Number of successful extensions: 1189
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 1188
Number of HSP's successfully gapped: 2
Length of query: 405
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 302
Effective length of database: 11,657,759
Effective search space: 3520643218
Effective search space used: 3520643218
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 157 (65.1 bits)