BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0156400 Os06g0156400|Os06g0156400
(189 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0156400 Lipolytic enzyme, G-D-S-L family protein 345 1e-95
Os01g0214200 Lipolytic enzyme, G-D-S-L family protein 195 2e-50
Os10g0476700 Lipolytic enzyme, G-D-S-L family protein 165 2e-41
Os09g0121900 125 2e-29
Os10g0339200 97 6e-21
Os11g0708400 Similar to CPRD49 92 2e-19
Os04g0269700 Lipolytic enzyme, G-D-S-L family protein 68 4e-12
>Os06g0156400 Lipolytic enzyme, G-D-S-L family protein
Length = 189
Score = 345 bits (886), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 168/168 (100%), Positives = 168/168 (100%)
Query: 22 TVCFGANDASLPGRASALQHVPLPEYRDNLRAICALLAAAWPSVVVILITPPPVHDAARV 81
TVCFGANDASLPGRASALQHVPLPEYRDNLRAICALLAAAWPSVVVILITPPPVHDAARV
Sbjct: 22 TVCFGANDASLPGRASALQHVPLPEYRDNLRAICALLAAAWPSVVVILITPPPVHDAARV 81
Query: 82 RYQYGGDCAGLPERTNESAGAYARACVEVAAECGLRVIDIWSKMQRFPGWESSFLRDGLH 141
RYQYGGDCAGLPERTNESAGAYARACVEVAAECGLRVIDIWSKMQRFPGWESSFLRDGLH
Sbjct: 82 RYQYGGDCAGLPERTNESAGAYARACVEVAAECGLRVIDIWSKMQRFPGWESSFLRDGLH 141
Query: 142 LTPRGNRVVFEEVVFALKDASLGLEALPADLPLFCDMDPNNPVKSFDE 189
LTPRGNRVVFEEVVFALKDASLGLEALPADLPLFCDMDPNNPVKSFDE
Sbjct: 142 LTPRGNRVVFEEVVFALKDASLGLEALPADLPLFCDMDPNNPVKSFDE 189
>Os01g0214200 Lipolytic enzyme, G-D-S-L family protein
Length = 238
Score = 195 bits (495), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 120/168 (71%), Gaps = 1/168 (0%)
Query: 22 TVCFGANDASLPGRASALQHVPLPEYRDNLRAICALLAAAWPSVVVILITPPPVHDAARV 81
TV FGANDASLP R QHVPL EY+ NLR+ICA WPS +ILITPPP+++ AR+
Sbjct: 70 TVFFGANDASLPERKQVHQHVPLDEYQSNLRSICAYFKEQWPSTKIILITPPPIYEPARI 129
Query: 82 RYQYG-GDCAGLPERTNESAGAYARACVEVAAECGLRVIDIWSKMQRFPGWESSFLRDGL 140
R YG D + LPERTNE+AG YA+AC+ VA E VIDIW+KMQ+FP W++S L DGL
Sbjct: 130 RDMYGEDDPSKLPERTNEAAGTYAQACLTVAKELNHPVIDIWTKMQQFPDWQTSALCDGL 189
Query: 141 HLTPRGNRVVFEEVVFALKDASLGLEALPADLPLFCDMDPNNPVKSFD 188
H TP GN+++F+ V+ L+ +L DLPLF D+DP +P+K+F+
Sbjct: 190 HFTPLGNKILFDCVLETLESIGFSQGSLQPDLPLFHDIDPKDPLKAFE 237
>Os10g0476700 Lipolytic enzyme, G-D-S-L family protein
Length = 270
Score = 165 bits (417), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/170 (48%), Positives = 106/170 (62%), Gaps = 3/170 (1%)
Query: 22 TVCFGANDASLPGRASALQHVPLPEYRDNLRAICALLAAAWPSVVVILITPPPVHDAARV 81
TV FGANDA+L GR QHVP+ EY++NL+ I L S++++LITPPP+ + R
Sbjct: 101 TVFFGANDAALLGRTGERQHVPVAEYKENLKKIVNHLKDCSKSMLIVLITPPPIDEDGRE 160
Query: 82 RYQ---YGGDCAGLPERTNESAGAYARACVEVAAECGLRVIDIWSKMQRFPGWESSFLRD 138
R+ YG + LPERTNE AG YA C+E+A E + IDIWSKMQ GW+ +L D
Sbjct: 161 RFARSLYGEEARKLPERTNEMAGVYASQCIELAREMNIHCIDIWSKMQETAGWQKLYLSD 220
Query: 139 GLHLTPRGNRVVFEEVVFALKDASLGLEALPADLPLFCDMDPNNPVKSFD 188
GLHLTP GN VV +EVV L+ L E +P D P +D + P K+F
Sbjct: 221 GLHLTPEGNAVVHKEVVQTLRSVGLKAEEMPYDFPHHSRIDGSCPEKAFQ 270
>Os09g0121900
Length = 132
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 73/101 (72%), Gaps = 1/101 (0%)
Query: 40 QHVPLPEYRDNLRAICALLAAAWPSVVVILITPPPVHDAARVRYQYG-GDCAGLPERTNE 98
QHVPL EY+ NLRAICA WPS +ILITPPP+++ R+R YG D + LPERTNE
Sbjct: 5 QHVPLDEYQSNLRAICAYFKEQWPSTKIILITPPPIYEPVRIRDMYGEDDPSKLPERTNE 64
Query: 99 SAGAYARACVEVAAECGLRVIDIWSKMQRFPGWESSFLRDG 139
+AG YA+AC+ VA E VIDIW+KMQ+FP W++S L G
Sbjct: 65 AAGTYAQACLTVAKELNHPVIDIWTKMQQFPDWQTSALWYG 105
>Os10g0339200
Length = 95
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 45/57 (78%), Positives = 48/57 (84%)
Query: 26 GANDASLPGRASALQHVPLPEYRDNLRAICALLAAAWPSVVVILITPPPVHDAARVR 82
ANDASLP RAS LQHV LPEY+DNLRAIC LL A WPSV++ILIT PPVHD ARVR
Sbjct: 39 SANDASLPERASTLQHVLLPEYKDNLRAICGLLTATWPSVIIILITLPPVHDVARVR 95
>Os11g0708400 Similar to CPRD49
Length = 260
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 83/156 (53%), Gaps = 10/156 (6%)
Query: 23 VCFGANDASLPGRASALQHVPLPEYRDNLRAICALLAAAWPSVVVILITPPPVHDAARVR 82
V FG ND+ + HVPL EY DN+R I L + VI ++ PP+++ +
Sbjct: 78 VYFGGNDSVAAHSSGLGPHVPLEEYIDNMRKIADHLKSLSEKTRVIFLSCPPLNEETLRK 137
Query: 83 YQYGGDCAGLPE--RTNESAGAYARACVEVAAECGLRVIDIWSKMQRFPGWESSFLRDGL 140
L E RTNE+ Y+ ACV + E L+V+D+W+ MQ+ W ++ DGL
Sbjct: 138 ----STSTVLSEIVRTNETCRLYSEACVSLCKEMDLKVVDLWNAMQKRDDWATACFTDGL 193
Query: 141 HLTPRGNRVVFEEVVFALKDAS----LGLEALPADL 172
HL+ G+++V EE++ LK+A L +A+P +
Sbjct: 194 HLSEEGSKIVVEEILRILKEAEWDPCLHWKAMPTEF 229
>Os04g0269700 Lipolytic enzyme, G-D-S-L family protein
Length = 209
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 82 RYQYG-GDCAGLPERTNESAGAYARACVEVAAECGLRVIDIWSKMQRFPGWESSFLRDGL 140
R YG D + LPERTNE+ G YA+AC+ VA E VIDIW+KMQ+FP W++S L GL
Sbjct: 142 RDMYGEDDPSKLPERTNEATGTYAQACLTVAKELNHPVIDIWTKMQQFPDWQTSALCRGL 201
Query: 141 HLTP 144
P
Sbjct: 202 EAKP 205
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.138 0.440
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,768,372
Number of extensions: 295852
Number of successful extensions: 591
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 587
Number of HSP's successfully gapped: 7
Length of query: 189
Length of database: 17,035,801
Length adjustment: 95
Effective length of query: 94
Effective length of database: 12,075,471
Effective search space: 1135094274
Effective search space used: 1135094274
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 153 (63.5 bits)