Os11g0708400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to CPRD49.
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Os11g0708400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to CPRD49.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.6 | 0.218 | 10.3 | -0.226 | 0.234 | 0.181 | -0.23 | 0.689 | 0.143 | 1.45 | 0.8209 | 6789 | -- | -- |
| 21.62 | 0.217 | 10.3 | -0.291 | 0.236 | 0.342 | -0.229 | -- | 0.144 | 1.44 | 0.7704 | 6854 | -- | -- |
| 21.79 | 0.217 | 10.3 | -0.16 | 0.235 | 0.0276 | -- | 1.36 | 0.144 | 1.73 | 0.8972 | 6863 | -- | -- |
| 21.79 | 0.217 | 10.3 | -0.301 | 0.24 | 0.33 | -- | -- | 0.15 | 1.57 | 0.8686 | 12922 | -- | -- |
| 25.15 | 0.234 | 10.3 | -0.145 | -- | 0.0189 | -- | 1.46 | 0.149 | -- | 0.8995 | 6761 | -- | -- |
| 25.22 | 0.235 | 10.3 | -0.15 | 0.239 | -- | -0.196 | -- | 0.113 | 1.5 | -- | -- | -- | -- |
| 25.37 | 0.236 | 10.3 | -0.144 | 0.24 | -- | -- | -- | 0.114 | 1.72 | -- | -- | -- | -- |
| 25.21 | 0.234 | 10.3 | -0.275 | -- | 0.354 | -- | -- | 0.149 | -- | 0.7868 | 6765 | -- | -- |
| 23.64 | 0.226 | 10.3 | -- | 0.236 | 0.258 | -- | -- | 0.165 | 1.73 | 0.8161 | 6880 | -- | -- |
| 28.88 | 0.251 | 10.3 | -0.134 | -- | -- | -- | -- | 0.119 | -- | -- | -- | -- | -- |
| 25.91 | 0.238 | 10.3 | -- | 0.238 | -- | -- | -- | 0.13 | 1.7 | -- | -- | -- | -- |
| 26.93 | 0.242 | 10.3 | -- | -- | 0.278 | -- | -- | 0.169 | -- | 0.8227 | 6439 | -- | -- |
| 29.35 | 0.253 | 10.3 | -- | -- | -- | -- | -- | 0.134 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.24 | temperature | 30.0 | 90 | < th | dose independent | rect. | 5 | 16 |
| 2 | 21.36 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 17 |
| 4 | 21.41 | humidity | 80.0 | 10 | > th | dose independent | rect. | 6 | 8 |
| 5 | 21.42 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 5 | 10 |
| 6 | 21.43 | humidity | 80.0 | 10 | > th | dose independent | rect. | 6 | 6 |
| 8 | 21.45 | humidity | 70.0 | 90 | > th | dose independent | rect. | 5 | 16 |
| 10 | 21.48 | radiation | 10.0 | 270 | < th | dose independent | rect. | 17 | 14 |
| 16 | 21.55 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 5 | 16 |
| 19 | 21.57 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 23 | 5 |
| 22 | 21.59 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 6 | 16 |
| 24 | 21.60 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 6 | 9 |
| 28 | 21.62 | radiation | 20.0 | 90 | < th | dose independent | rect. | 5 | 6 |
| 42 | 21.67 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 2 | 16 |
| 43 | 21.68 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 47 | 21.68 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 52 | 21.70 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 6 | 3 |
| 57 | 21.71 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 7 | 22 |
| 63 | 21.73 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 9 | 19 |
| 66 | 21.74 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 17 | 14 |
| 75 | 21.76 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 5 | 3 |
| 77 | 21.77 | radiation | 20.0 | 90 | < th | dose independent | rect. | 5 | 4 |
| 78 | 21.77 | humidity | 90.0 | 30 | < th | dose independent | rect. | 18 | 13 |
| 91 | 21.80 | humidity | 80.0 | 10 | > th | dose independent | rect. | 6 | 4 |
| 93 | 21.80 | radiation | 20.0 | 10 | < th | dose independent | rect. | 5 | 5 |
| 97 | 21.80 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 5 | 6 |
| 105 | 21.82 | radiation | 20.0 | 10 | < th | dose independent | rect. | 6 | 3 |
| 110 | 21.82 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 11 |
| 113 | 21.83 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 6 | 6 |
| 117 | 21.84 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 9 | 9 |
| 124 | 21.85 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 12 |
| 128 | 21.86 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 3 | 8 |
| 139 | 21.89 | humidity | 70.0 | 90 | > th | dose independent | rect. | 18 | 15 |
| 152 | 21.90 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 5 | 4 |
| 160 | 21.91 | humidity | 50.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 162 | 21.91 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 5 | 8 |
| 170 | 21.92 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 10 |
| 179 | 21.93 | radiation | 20.0 | 10 | < th | dose independent | rect. | 5 | 9 |
| 180 | 21.93 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 3 | 6 |
| 190 | 21.94 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 19 | 2 |
| 191 | 21.94 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 5 | 4 |
| 210 | 21.95 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 5 | 19 |
| 211 | 21.96 | humidity | 80.0 | 30 | < th | dose independent | rect. | 9 | 9 |
| 217 | 21.96 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 5 | 10 |
| 223 | 21.97 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 14 |
| 224 | 21.97 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 14 |
| 228 | 21.97 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 229 | 21.97 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 21 | 8 |
| 232 | 21.97 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 14 |
| 233 | 21.98 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 10 |
| 236 | 21.98 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 10 |
| 244 | 21.99 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 251 | 22.00 | wind | 9.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 260 | 22.01 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 5 | 4 |
| 277 | 22.02 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 10 |
| 315 | 22.05 | wind | 1.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 319 | 22.05 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 327 | 22.06 | temperature | 15.0 | 90 | > th | dose independent | rect. | 18 | 15 |
| 334 | 22.07 | wind | 7.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 337 | 22.07 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 10 |
| 342 | 22.07 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 356 | 22.08 | atmosphere | 1000.0 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 357 | 22.08 | atmosphere | 1000.0 | 14400 | > th | dose independent | rect. | 8 | 3 |
| 371 | 22.09 | atmosphere | 1000.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 393 | 22.09 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 21 | 6 |
| 397 | 22.09 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 6 | 18 |
| 420 | 22.11 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 441 | 22.12 | radiation | 20.0 | 10 | < th | dose independent | rect. | 5 | 19 |
| 463 | 22.13 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 14 |
| 469 | 22.13 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 9 | 9 |
| 470 | 22.13 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 7 | 11 |
| 486 | 22.14 | temperature | 20.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 487 | 22.14 | atmosphere | 1000.0 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 488 | 22.14 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 6 | 4 |
| 494 | 22.15 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 509 | 22.15 | humidity | 70.0 | 10 | > th | dose independent | rect. | 18 | 15 |
| 511 | 22.15 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 19 | 15 |
| 530 | 22.16 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 16 | 3 |
| 541 | 22.16 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 16 | 3 |
| 570 | 22.17 | radiation | 20.0 | 10 | < th | dose independent | rect. | 18 | 16 |
| 572 | 22.17 | wind | 1.0 | 90 | > th | dose dependent | rect. | 6 | 1 |
| 578 | 22.17 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 12 | 7 |
| 611 | 22.18 | radiation | 20.0 | 90 | < th | dose independent | rect. | 5 | 19 |
| 630 | 22.19 | wind | 3.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 631 | 22.19 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 634 | 22.19 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 16 | 3 |
| 648 | 22.19 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 694 | 22.21 | atmosphere | 1000.0 | 14400 | > th | dose independent | sin | 2 | NA |
| 696 | 22.21 | atmosphere | 1000.0 | 14400 | < th | dose independent | sin | 1 | NA |
| 749 | 22.22 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 802 | 22.23 | atmosphere | 1000.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 803 | 22.23 | atmosphere | 1000.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 909 | 22.24 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 5 |
| 969 | 22.25 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 22 | 4 |
| 993 | 22.26 | humidity | 80.0 | 270 | > th | dose independent | rect. | 21 | 6 |