Os04g0269700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Lipolytic enzyme, G-D-S-L family protein.
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Os04g0269700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Lipolytic enzyme, G-D-S-L family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 54.86 | 0.348 | 9.06 | -0.745 | 0.143 | -1.29 | 1.1 | -0.906 | 0.431 | 2.49 | 23.18 | 22 | -- | -- |
| 55.7 | 0.35 | 9.07 | -0.847 | 0.129 | -1.15 | 0.843 | -- | 0.41 | 2.72 | 23.3 | 33 | -- | -- |
| 58.05 | 0.358 | 9.07 | -0.857 | 0.138 | -1.19 | -- | -0.124 | 0.408 | 1.57 | 23.18 | 22 | -- | -- |
| 58.07 | 0.357 | 9.07 | -0.87 | 0.136 | -1.17 | -- | -- | 0.405 | 1.58 | 23.2 | 28 | -- | -- |
| 59.08 | 0.36 | 9.07 | -0.842 | -- | -1.09 | -- | -0.0406 | 0.422 | -- | 23.16 | 19 | -- | -- |
| 73.06 | 0.401 | 9.03 | -0.607 | 0.0332 | -- | -0.892 | -- | 0.571 | 15 | -- | -- | -- | -- |
| 75.59 | 0.407 | 9.03 | -0.627 | 0.0543 | -- | -- | -- | 0.565 | 10.8 | -- | -- | -- | -- |
| 59.09 | 0.36 | 9.07 | -0.847 | -- | -1.08 | -- | -- | 0.42 | -- | 23.2 | 18 | -- | -- |
| 76.31 | 0.409 | 9.04 | -- | 0.0703 | -0.842 | -- | -- | 0.542 | 1.73 | 23.1 | 6 | -- | -- |
| 75.78 | 0.407 | 9.04 | -0.628 | -- | -- | -- | -- | 0.565 | -- | -- | -- | -- | -- |
| 85.94 | 0.434 | 9.02 | -- | 0.0603 | -- | -- | -- | 0.635 | 11.5 | -- | -- | -- | -- |
| 76.58 | 0.409 | 9.04 | -- | -- | -0.803 | -- | -- | 0.548 | -- | 23.07 | 6 | -- | -- |
| 86.17 | 0.433 | 9.02 | -- | -- | -- | -- | -- | 0.635 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 52.72 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 12 | 18 |
| 78 | 54.77 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 9 | 16 |
| 82 | 54.84 | temperature | 25.0 | 720 | < th | dose dependent | sin | 19 | NA |
| 168 | 55.71 | temperature | 25.0 | 30 | < th | dose dependent | sin | 11 | NA |
| 216 | 55.95 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 221 | 55.99 | temperature | 25.0 | 270 | < th | dose dependent | sin | 14 | NA |
| 238 | 56.07 | temperature | 25.0 | 10 | < th | dose dependent | no | NA | NA |
| 243 | 56.07 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 252 | 56.11 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 258 | 56.14 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 262 | 56.15 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 272 | 56.19 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 290 | 56.31 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 330 | 56.60 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 15 | 6 |
| 338 | 56.61 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 430 | 57.14 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 21 | 7 |
| 457 | 57.34 | temperature | 10.0 | 10 | > th | dose dependent | sin | 10 | NA |
| 489 | 57.58 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 527 | 57.83 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 23 | 6 |
| 539 | 57.90 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 545 | 57.92 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 547 | 57.92 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 22 | 8 |
| 551 | 57.95 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 579 | 58.09 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 582 | 58.09 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 657 | 58.40 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 18 | 13 |
| 781 | 58.77 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 792 | 58.79 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 6 |
| 810 | 58.83 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 818 | 58.84 | radiation | 30.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 867 | 58.99 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 868 | 58.99 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 6 |
| 946 | 59.15 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 955 | 59.18 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 956 | 59.18 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |