BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0269700 Os04g0269700|AK069600
(209 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0269700 Lipolytic enzyme, G-D-S-L family protein 295 1e-80
Os01g0214200 Lipolytic enzyme, G-D-S-L family protein 126 1e-29
Os09g0121900 118 4e-27
Os06g0156400 Lipolytic enzyme, G-D-S-L family protein 69 2e-12
Os10g0476700 Lipolytic enzyme, G-D-S-L family protein 66 2e-11
>Os04g0269700 Lipolytic enzyme, G-D-S-L family protein
Length = 209
Score = 295 bits (756), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 157/209 (75%), Positives = 157/209 (75%)
Query: 1 SALTLLSRSPSKSVLPPSRVRSFCFLPIDSPRSASDLRGSDTLPPYPLLSGRRPIPTCVR 60
SALTLLSRSPSKSVLPPSRVRSFCFLPIDSPRSASDLRGSDTLPPYPLLSGRRPIPTCVR
Sbjct: 1 SALTLLSRSPSKSVLPPSRVRSFCFLPIDSPRSASDLRGSDTLPPYPLLSGRRPIPTCVR 60
Query: 61 HRFLERPTWCCAGSAATTXXXXXXXXXXXXXXXXXXXXQTRWLSRCSWAPXXXXXXXXXX 120
HRFLERPTWCCAGSAATT QTRWLSRCSWAP
Sbjct: 61 HRFLERPTWCCAGSAATTRGGRCGCWRGRWRVPPPWGRQTRWLSRCSWAPTTRRCRIGSR 120
Query: 121 XXXXXXXXXXXXXXXXXXXXXXDMYGEDDPSKLPERTNEATGTYAQACLTVAKELNHPVI 180
DMYGEDDPSKLPERTNEATGTYAQACLTVAKELNHPVI
Sbjct: 121 CTSTCRSTSTRATSAPSAPTSRDMYGEDDPSKLPERTNEATGTYAQACLTVAKELNHPVI 180
Query: 181 DIWTKMQQFPDWQTSALCRGLEAKPTVWR 209
DIWTKMQQFPDWQTSALCRGLEAKPTVWR
Sbjct: 181 DIWTKMQQFPDWQTSALCRGLEAKPTVWR 209
>Os01g0214200 Lipolytic enzyme, G-D-S-L family protein
Length = 238
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 58/63 (92%), Positives = 58/63 (92%)
Query: 143 DMYGEDDPSKLPERTNEATGTYAQACLTVAKELNHPVIDIWTKMQQFPDWQTSALCRGLE 202
DMYGEDDPSKLPERTNEA GTYAQACLTVAKELNHPVIDIWTKMQQFPDWQTSALC GL
Sbjct: 131 DMYGEDDPSKLPERTNEAAGTYAQACLTVAKELNHPVIDIWTKMQQFPDWQTSALCDGLH 190
Query: 203 AKP 205
P
Sbjct: 191 FTP 193
>Os09g0121900
Length = 132
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 55/58 (94%), Positives = 55/58 (94%)
Query: 143 DMYGEDDPSKLPERTNEATGTYAQACLTVAKELNHPVIDIWTKMQQFPDWQTSALCRG 200
DMYGEDDPSKLPERTNEA GTYAQACLTVAKELNHPVIDIWTKMQQFPDWQTSAL G
Sbjct: 48 DMYGEDDPSKLPERTNEAAGTYAQACLTVAKELNHPVIDIWTKMQQFPDWQTSALWYG 105
>Os06g0156400 Lipolytic enzyme, G-D-S-L family protein
Length = 189
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 145 YGEDDPSKLPERTNEATGTYAQACLTVAKELNHPVIDIWTKMQQFPDWQTSALCRGLEAK 204
YG D + LPERTNE+ G YA+AC+ VA E VIDIW+KMQ+FP W++S L GL
Sbjct: 85 YG-GDCAGLPERTNESAGAYARACVEVAAECGLRVIDIWSKMQRFPGWESSFLRDGLHLT 143
Query: 205 P 205
P
Sbjct: 144 P 144
>Os10g0476700 Lipolytic enzyme, G-D-S-L family protein
Length = 270
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 144 MYGEDDPSKLPERTNEATGTYAQACLTVAKELNHPVIDIWTKMQQFPDWQTSALCRGLEA 203
+YGE+ KLPERTNE G YA C+ +A+E+N IDIW+KMQ+ WQ L GL
Sbjct: 166 LYGEE-ARKLPERTNEMAGVYASQCIELAREMNIHCIDIWSKMQETAGWQKLYLSDGLHL 224
Query: 204 KP 205
P
Sbjct: 225 TP 226
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.132 0.443
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,311,535
Number of extensions: 222366
Number of successful extensions: 535
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 533
Number of HSP's successfully gapped: 5
Length of query: 209
Length of database: 17,035,801
Length adjustment: 96
Effective length of query: 113
Effective length of database: 12,023,257
Effective search space: 1358628041
Effective search space used: 1358628041
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 154 (63.9 bits)