BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os05g0583500 Os05g0583500|AK100131
         (1136 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os05g0583500  PX-associated domain containing protein            2088   0.0  
Os11g0159000  Conserved hypothetical protein                      170   6e-42

>Os05g0583500 PX-associated domain containing protein
          Length = 1136

 Score = 2088 bits (5411), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1025/1136 (90%), Positives = 1025/1136 (90%)

Query: 1    MATAGGPGRAHTVRDLAEEGKKRXXXXXXXXXXXXXXMSLTSSSVWINLPFATALIVLFR 60
            MATAGGPGRAHTVRDLAEEGKKR              MSLTSSSVWINLPFATALIVLFR
Sbjct: 1    MATAGGPGRAHTVRDLAEEGKKRAVLLLVFAFGLAFLMSLTSSSVWINLPFATALIVLFR 60

Query: 61   YISLDYDFRRKSTTTTDNDASRALTKTKSIEPNKIPSIQKDGKSDWKSKVNSPPVEAAIE 120
            YISLDYDFRRKSTTTTDNDASRALTKTKSIEPNKIPSIQKDGKSDWKSKVNSPPVEAAIE
Sbjct: 61   YISLDYDFRRKSTTTTDNDASRALTKTKSIEPNKIPSIQKDGKSDWKSKVNSPPVEAAIE 120

Query: 121  QFTRHLVTEWVTDLWYSRVTPDKEGPEELINIVNNVLGEISVRARNVNLIALLTRDLIDL 180
            QFTRHLVTEWVTDLWYSRVTPDKEGPEELINIVNNVLGEISVRARNVNLIALLTRDLIDL
Sbjct: 121  QFTRHLVTEWVTDLWYSRVTPDKEGPEELINIVNNVLGEISVRARNVNLIALLTRDLIDL 180

Query: 181  ICKNLELYHLCQAKIGKEKFVNLSTERRDAELKLTLITENKLHPALFSASAEHKILQSLA 240
            ICKNLELYHLCQAKIGKEKFVNLSTERRDAELKLTLITENKLHPALFSASAEHKILQSLA
Sbjct: 181  ICKNLELYHLCQAKIGKEKFVNLSTERRDAELKLTLITENKLHPALFSASAEHKILQSLA 240

Query: 241  DGLISVTAKPQDLQCYFFRCTARELLACAVMRPVVNLANPRFINERIELLALSHANKAER 300
            DGLISVTAKPQDLQCYFFRCTARELLACAVMRPVVNLANPRFINERIELLALSHANKAER
Sbjct: 241  DGLISVTAKPQDLQCYFFRCTARELLACAVMRPVVNLANPRFINERIELLALSHANKAER 300

Query: 301  GVAESLEHATMVKQREPPMPTVDELAALIDPTSSGVELVRFSQDQSKAAPDTQLSNTRHX 360
            GVAESLEHATMVKQREPPMPTVDELAALIDPTSSGVELVRFSQDQSKAAPDTQLSNTRH 
Sbjct: 301  GVAESLEHATMVKQREPPMPTVDELAALIDPTSSGVELVRFSQDQSKAAPDTQLSNTRHP 360

Query: 361  XXXXXXXXXXXXXXXXXXXXXXXXXXTTXXXXXXXXXXXXXXXGRTTAECYEGEWAQTMD 420
                                      TT               GRTTAECYEGEWAQTMD
Sbjct: 361  SNLKPNSSSTSLTNSSHPLESSILSSTTHGHSNSSMSLHSQSSGRTTAECYEGEWAQTMD 420

Query: 421  ISSQQKSQALAPEHLENMWTKGKNYKSENVKHVARVPSKSSSLGTSPVQQSAPYSTSVGH 480
            ISSQQKSQALAPEHLENMWTKGKNYKSENVKHVARVPSKSSSLGTSPVQQSAPYSTSVGH
Sbjct: 421  ISSQQKSQALAPEHLENMWTKGKNYKSENVKHVARVPSKSSSLGTSPVQQSAPYSTSVGH 480

Query: 481  YPSAPQRQTTMSRSDDQHLIKHSTTAAYLNGTNHLRMALSRESADHASQEDFGVDSESSY 540
            YPSAPQRQTTMSRSDDQHLIKHSTTAAYLNGTNHLRMALSRESADHASQEDFGVDSESSY
Sbjct: 481  YPSAPQRQTTMSRSDDQHLIKHSTTAAYLNGTNHLRMALSRESADHASQEDFGVDSESSY 540

Query: 541  ATEEDENNNVTGLDSPVTRVWDSKSKGNATSSHIHHPLESPGFHKAKKNRSHIGKLKMTK 600
            ATEEDENNNVTGLDSPVTRVWDSKSKGNATSSHIHHPLESPGFHKAKKNRSHIGKLKMTK
Sbjct: 541  ATEEDENNNVTGLDSPVTRVWDSKSKGNATSSHIHHPLESPGFHKAKKNRSHIGKLKMTK 600

Query: 601  TSGRKRSRSNSQKPPVWQEVERSSLLVGDDLNILNTSADDSRTDGLYDDTEVESMSRMFX 660
            TSGRKRSRSNSQKPPVWQEVERSSLLVGDDLNILNTSADDSRTDGLYDDTEVESMSRMF 
Sbjct: 601  TSGRKRSRSNSQKPPVWQEVERSSLLVGDDLNILNTSADDSRTDGLYDDTEVESMSRMFS 660

Query: 661  XXXXXXXXXXXXXXXXXXXXXXXXVLEDSYLKLKCEVVGASIVKSGSGMFAVYSVSVTDA 720
                                    VLEDSYLKLKCEVVGASIVKSGSGMFAVYSVSVTDA
Sbjct: 661  GANASSLSLASTDSSYSSNYSTTNVLEDSYLKLKCEVVGASIVKSGSGMFAVYSVSVTDA 720

Query: 721  NGNSWSIKXXXXXXXXXXXXXKEYSQYNLHLPPKHFLSSGLEVPVVRERCKLLDIYLKKL 780
            NGNSWSIK             KEYSQYNLHLPPKHFLSSGLEVPVVRERCKLLDIYLKKL
Sbjct: 721  NGNSWSIKRRFRHFEELHRRLKEYSQYNLHLPPKHFLSSGLEVPVVRERCKLLDIYLKKL 780

Query: 781  LQIPTVSSCIEVWDFLSVDSQTYIFTDTLSVIQTLSVNLDERSKEKNTKSFNSSQALNGN 840
            LQIPTVSSCIEVWDFLSVDSQTYIFTDTLSVIQTLSVNLDERSKEKNTKSFNSSQALNGN
Sbjct: 781  LQIPTVSSCIEVWDFLSVDSQTYIFTDTLSVIQTLSVNLDERSKEKNTKSFNSSQALNGN 840

Query: 841  LVSASQSLHVHKDDTMPKEKDKDFDAVDGLRSRKRNTEQNLGIGVGNTNANLHEDLSGSD 900
            LVSASQSLHVHKDDTMPKEKDKDFDAVDGLRSRKRNTEQNLGIGVGNTNANLHEDLSGSD
Sbjct: 841  LVSASQSLHVHKDDTMPKEKDKDFDAVDGLRSRKRNTEQNLGIGVGNTNANLHEDLSGSD 900

Query: 901  PEQNEHSFIINSGNSKKTLSSETDYPPQSLESDGYSVAPNDWMAPNLSVPLFHLVDVVFQ 960
            PEQNEHSFIINSGNSKKTLSSETDYPPQSLESDGYSVAPNDWMAPNLSVPLFHLVDVVFQ
Sbjct: 901  PEQNEHSFIINSGNSKKTLSSETDYPPQSLESDGYSVAPNDWMAPNLSVPLFHLVDVVFQ 960

Query: 961  LQDGGWIRRQAFWVVKQILQLGMGDTFDDWLVEKIQLLRKGRIVAFAVKRVEQILWPDGI 1020
            LQDGGWIRRQAFWVVKQILQLGMGDTFDDWLVEKIQLLRKGRIVAFAVKRVEQILWPDGI
Sbjct: 961  LQDGGWIRRQAFWVVKQILQLGMGDTFDDWLVEKIQLLRKGRIVAFAVKRVEQILWPDGI 1020

Query: 1021 FLTKHPKRKAATPPPGSQSNGMANYLTDEQRLEDAHRANFVHELMIEKAPSALVSLVGRK 1080
            FLTKHPKRKAATPPPGSQSNGMANYLTDEQRLEDAHRANFVHELMIEKAPSALVSLVGRK
Sbjct: 1021 FLTKHPKRKAATPPPGSQSNGMANYLTDEQRLEDAHRANFVHELMIEKAPSALVSLVGRK 1080

Query: 1081 EYERCAQDVYFFLQSPVCLKQXXXXXXXXXXXXXXXXXDDIVKKWHEDKQQLYALE 1136
            EYERCAQDVYFFLQSPVCLKQ                 DDIVKKWHEDKQQLYALE
Sbjct: 1081 EYERCAQDVYFFLQSPVCLKQLAFEVLELLVLAAFPELDDIVKKWHEDKQQLYALE 1136



>Os11g0159000 Conserved hypothetical protein
          Length = 252

 Score =  170 bits (430), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 88/246 (35%), Positives = 140/246 (56%), Gaps = 3/246 (1%)

Query: 13  VRDLAEEGKKRXXXXXXXXXXXXXXMSLTSSSVWINLPFATALIVLFRYISLDYDFRRKS 72
           V DL EE K R              ++ TS S+W N+P +  ++   RY+S   +F  + 
Sbjct: 8   VDDLIEEAKVRTVWWALCVFAISYFLTHTSKSMWTNVPMSILILAFLRYLSFKVEFHWRG 67

Query: 73  TTTTDNDASRALTKTK-SIEPNKIPSIQKDGKSDWKSKVNSPPVEAAIEQFTRHLVTEWV 131
                      L+K + S   +++ ++     S W+ KV SP VEAA E F  +++ ++V
Sbjct: 68  QPVQKQTHLSQLSKRQLSAHDHRLSTVAP--VSRWRRKVGSPSVEAAFESFIENILRDFV 125

Query: 132 TDLWYSRVTPDKEGPEELINIVNNVLGEISVRARNVNLIALLTRDLIDLICKNLELYHLC 191
            DLWYS +TPD+E PE +  ++ + LGEIS R + +NL+ LLTRD+ DLI  +L+++   
Sbjct: 126 VDLWYSSITPDREAPELIRGLILHALGEISGRVKEMNLVDLLTRDMADLIGHHLDIFRKN 185

Query: 192 QAKIGKEKFVNLSTERRDAELKLTLITENKLHPALFSASAEHKILQSLADGLISVTAKPQ 251
           Q++IG +    LS+E RD  LK  LI   +LHPAL S+  E+K+ Q +  G++++  +PQ
Sbjct: 186 QSQIGVDVMGTLSSEERDERLKQHLIVSQELHPALLSSEHEYKVFQDIVGGIMALVLRPQ 245

Query: 252 DLQCYF 257
           D Q +F
Sbjct: 246 DAQIWF 251



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.314    0.129    0.372 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 35,347,848
Number of extensions: 1399844
Number of successful extensions: 3112
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3106
Number of HSP's successfully gapped: 2
Length of query: 1136
Length of database: 17,035,801
Length adjustment: 112
Effective length of query: 1024
Effective length of database: 11,187,833
Effective search space: 11456340992
Effective search space used: 11456340992
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 162 (67.0 bits)