Os11g0159000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0159000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16.51 | 0.191 | 10.9 | 0.65 | 0.581 | 0.15 | -0.413 | 1.61 | 0.32 | 3.38 | 0.2179 | 4745 | -- | -- |
| 16.9 | 0.191 | 10.9 | 0.692 | 0.579 | 0.323 | -0.411 | -- | 0.342 | 3.3 | 0.5001 | 2870 | -- | -- |
| 17.05 | 0.192 | 10.9 | 0.661 | 0.581 | 0.138 | -- | 1.59 | 0.32 | 3.38 | 0.2704 | 4745 | -- | -- |
| 17.37 | 0.194 | 10.9 | 0.68 | 0.578 | 0.373 | -- | -- | 0.33 | 3.38 | 0.6689 | 2642 | -- | -- |
| 35.83 | 0.279 | 10.9 | 0.675 | -- | 0.119 | -- | 1.8 | 0.334 | -- | 0.2723 | 4839 | -- | -- |
| 19.26 | 0.206 | 10.9 | 0.77 | 0.588 | -- | -0.358 | -- | 0.308 | 3.37 | -- | -- | -- | -- |
| 19.67 | 0.208 | 10.9 | 0.777 | 0.586 | -- | -- | -- | 0.311 | 3.36 | -- | -- | -- | -- |
| 36.11 | 0.28 | 10.9 | 0.694 | -- | 0.426 | -- | -- | 0.347 | -- | 0.8303 | 2438 | -- | -- |
| 22.75 | 0.222 | 10.9 | -- | 0.589 | 0.567 | -- | -- | 0.304 | 3.27 | 1 | 32085 | -- | -- |
| 39.02 | 0.292 | 10.9 | 0.802 | -- | -- | -- | -- | 0.326 | -- | -- | -- | -- | -- |
| 35.59 | 0.279 | 11 | -- | 0.602 | -- | -- | -- | 0.224 | 3.36 | -- | -- | -- | -- |
| 43.17 | 0.306 | 10.9 | -- | -- | 0.655 | -- | -- | 0.343 | -- | 1 | 29813 | -- | -- |
| 55.99 | 0.349 | 11 | -- | -- | -- | -- | -- | 0.237 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 15.02 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 8 |
| 3 | 15.06 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 8 |
| 4 | 15.07 | wind | 1.0 | 43200 | < th | dose independent | rect. | 23 | 7 |
| 8 | 15.10 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 6 |
| 11 | 15.11 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 6 |
| 14 | 15.15 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 12 |
| 15 | 15.16 | wind | 1.0 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 18 | 15.16 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 12 |
| 21 | 15.18 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 11 |
| 35 | 15.24 | wind | 1.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 42 | 15.27 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 53 | 15.31 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 64 | 15.35 | wind | 1.0 | 43200 | < th | dose independent | rect. | 3 | 8 |
| 65 | 15.36 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 66 | 15.36 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 3 |
| 69 | 15.37 | wind | 1.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 74 | 15.38 | wind | 1.0 | 43200 | < th | dose independent | rect. | 21 | 9 |
| 76 | 15.39 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 83 | 15.40 | wind | 1.0 | 43200 | < th | dose independent | rect. | 19 | 11 |
| 93 | 15.42 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 8 |
| 94 | 15.43 | wind | 1.0 | 43200 | > th | dose independent | rect. | 24 | 4 |
| 99 | 15.43 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 10 |
| 101 | 15.44 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 102 | 15.44 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 3 |
| 104 | 15.44 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 4 | 11 |
| 108 | 15.45 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 111 | 15.46 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 115 | 15.47 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 116 | 15.47 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 8 |
| 121 | 15.47 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 124 | 15.47 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 8 |
| 129 | 15.48 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 4 | 11 |
| 132 | 15.48 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 4 | 11 |
| 133 | 15.49 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 134 | 15.49 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 12 | 4 |
| 135 | 15.49 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 136 | 15.49 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 12 | 4 |
| 138 | 15.50 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 142 | 15.50 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 3 |
| 147 | 15.51 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 12 | 5 |
| 150 | 15.52 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 4 |
| 161 | 15.54 | wind | 1.0 | 43200 | < th | dose independent | rect. | 24 | 4 |
| 166 | 15.55 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 10 |
| 168 | 15.55 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 10 |
| 173 | 15.55 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 10 |
| 174 | 15.56 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 176 | 15.56 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 183 | 15.57 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 8 |
| 200 | 15.59 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 6 |
| 216 | 15.61 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 4 | 10 |
| 218 | 15.62 | wind | 1.0 | 43200 | < th | dose independent | sin | 8 | NA |
| 225 | 15.62 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 237 | 15.63 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 16 |
| 243 | 15.64 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 248 | 15.65 | wind | 1.0 | 43200 | > th | dose independent | sin | 8 | NA |
| 253 | 15.65 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 3 |
| 271 | 15.68 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 8 |
| 273 | 15.68 | wind | 1.0 | 43200 | > th | dose independent | rect. | 19 | 11 |
| 282 | 15.69 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 10 |
| 284 | 15.70 | wind | 1.0 | 14400 | > th | dose independent | rect. | 3 | 3 |
| 287 | 15.70 | wind | 1.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 291 | 15.71 | precipitation | 0.1 | 1440 | > th | dose independent | sin | 3 | NA |
| 293 | 15.71 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 6 |
| 295 | 15.71 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 24 | 17 |
| 296 | 15.71 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 24 | 17 |
| 301 | 15.71 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 24 | 17 |
| 306 | 15.72 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 24 | 15 |
| 309 | 15.73 | precipitation | 0.1 | 1440 | < th | dose independent | sin | 3 | NA |
| 316 | 15.73 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 24 | 15 |
| 319 | 15.73 | precipitation | 0.1 | 1440 | < th | dose dependent | sin | 3 | NA |
| 324 | 15.73 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 24 | 15 |
| 327 | 15.74 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 346 | 15.76 | wind | 1.0 | 14400 | < th | dose independent | rect. | 3 | 3 |
| 354 | 15.77 | precipitation | 0.1 | 1440 | > th | dose dependent | sin | 3 | NA |
| 355 | 15.77 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 356 | 15.77 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 394 | 15.79 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 12 |
| 399 | 15.80 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 448 | 15.82 | wind | 1.0 | 43200 | < th | dose independent | rect. | 19 | 15 |
| 461 | 15.83 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 469 | 15.83 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 475 | 15.84 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 476 | 15.84 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 477 | 15.84 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 488 | 15.84 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 489 | 15.84 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 545 | 15.87 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 19 |
| 555 | 15.88 | wind | 1.0 | 43200 | > th | dose independent | rect. | 19 | 15 |
| 584 | 15.90 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 13 |
| 585 | 15.90 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 13 |
| 595 | 15.90 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 13 |
| 623 | 15.92 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 11 |
| 624 | 15.92 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 11 |
| 637 | 15.92 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 11 |
| 673 | 15.94 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 715 | 15.96 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 8 |
| 716 | 15.96 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 12 | 8 |
| 723 | 15.96 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 12 | 8 |
| 761 | 15.98 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 774 | 15.98 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 19 | 22 |
| 797 | 16.00 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 0 | NA |
| 799 | 16.00 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 0 | NA |
| 802 | 16.00 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 814 | 16.00 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 0 | NA |
| 972 | 16.09 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 2 | NA |