BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0521500 Os05g0521500|AK066030
(554 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0521500 Peptidase S16, lon N-terminal domain containin... 1081 0.0
Os01g0743600 Peptidase S16, lon N-terminal domain containin... 530 e-150
>Os05g0521500 Peptidase S16, lon N-terminal domain containing protein
Length = 554
Score = 1081 bits (2796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/554 (94%), Positives = 526/554 (94%)
Query: 1 MADWDGVPARERRQMEEILQLDMEELNVEMVNDDGSSSEEANGGDDGADAFLREGVASTS 60
MADWDGVPARERRQMEEILQLDMEELNVEMVNDDGSSSEEANGGDDGADAFLREGVASTS
Sbjct: 1 MADWDGVPARERRQMEEILQLDMEELNVEMVNDDGSSSEEANGGDDGADAFLREGVASTS 60
Query: 61 GQFTFNTSLASLHTYLGEVDDTRGRVSLLDGGTILSLPMLYLQGVVLFPGATLPLRLIQG 120
GQFTFNTSLASLHTYLGEVDDTRGRVSLLDGGTILSLPMLYLQGVVLFPGATLPLRLIQG
Sbjct: 61 GQFTFNTSLASLHTYLGEVDDTRGRVSLLDGGTILSLPMLYLQGVVLFPGATLPLRLIQG 120
Query: 121 RFVAAVEKALRQVDAPCTIGVVLMYKRHSTRHYANASVGTTAEIRQLGRMDDGSLNVVAR 180
RFVAAVEKALRQVDAPCTIGVVLMYKRHSTRHYANASVGTTAEIRQLGRMDDGSLNVVAR
Sbjct: 121 RFVAAVEKALRQVDAPCTIGVVLMYKRHSTRHYANASVGTTAEIRQLGRMDDGSLNVVAR 180
Query: 181 GQQRFRLKRHWMXXXXXXXXXXQIIEEDTPLRTPRDAFAQLASCNSLRQHTSSPVISLDV 240
GQQRFRLKRHWM QIIEEDTPLRTPRDAFAQLASCNSLRQHTSSPVISLDV
Sbjct: 181 GQQRFRLKRHWMDVDGVVWGDVQIIEEDTPLRTPRDAFAQLASCNSLRQHTSSPVISLDV 240
Query: 241 SPIKQRDHVDSELDCGTPSPKSTASNHSAIXXXXXXXXXXXXXXXXXXNEDGIFMHEQFY 300
SPIKQRDHVDSELDCGTPSPKSTASNHSAI NEDGIFMHEQFY
Sbjct: 241 SPIKQRDHVDSELDCGTPSPKSTASNHSAIDSRMCHSDSRSSSSMRSSNEDGIFMHEQFY 300
Query: 301 SQELHPLKGSAAVQSGENTNMGEEDFCLTSLRSLSSAGTRDTKEQRQYILPKQHFQAPLS 360
SQELHPLKGSAAVQSGENTNMGEEDFCLTSLRSLSSAGTRDTKEQRQYILPKQHFQAPLS
Sbjct: 301 SQELHPLKGSAAVQSGENTNMGEEDFCLTSLRSLSSAGTRDTKEQRQYILPKQHFQAPLS 360
Query: 361 FWPRWAYQMYDSYALARRAADLWRQIITHPSMDDYVRKPDLLSFSIGSKLPVSESVRQKL 420
FWPRWAYQMYDSYALARRAADLWRQIITHPSMDDYVRKPDLLSFSIGSKLPVSESVRQKL
Sbjct: 361 FWPRWAYQMYDSYALARRAADLWRQIITHPSMDDYVRKPDLLSFSIGSKLPVSESVRQKL 420
Query: 421 LEIDGISYRLRREIQLLKAFNLIKCRCCKSLIAKRSDMVVMSTDGPLGAYVNPHGFVHET 480
LEIDGISYRLRREIQLLKAFNLIKCRCCKSLIAKRSDMVVMSTDGPLGAYVNPHGFVHET
Sbjct: 421 LEIDGISYRLRREIQLLKAFNLIKCRCCKSLIAKRSDMVVMSTDGPLGAYVNPHGFVHET 480
Query: 481 ITVSRATGLALDGNPSTVHSWFPGYSWTIASCTDCESNIGWLFKATKKNLRPRSFWGIRS 540
ITVSRATGLALDGNPSTVHSWFPGYSWTIASCTDCESNIGWLFKATKKNLRPRSFWGIRS
Sbjct: 481 ITVSRATGLALDGNPSTVHSWFPGYSWTIASCTDCESNIGWLFKATKKNLRPRSFWGIRS 540
Query: 541 SQIADDAQELDQDE 554
SQIADDAQELDQDE
Sbjct: 541 SQIADDAQELDQDE 554
>Os01g0743600 Peptidase S16, lon N-terminal domain containing protein
Length = 535
Score = 530 bits (1364), Expect = e-150, Method: Compositional matrix adjust.
Identities = 294/557 (52%), Positives = 371/557 (66%), Gaps = 35/557 (6%)
Query: 1 MADWDGVPARERRQMEEILQLDMEELNVEMVNDDGSSSEEANGGDDGADAFLR----EGV 56
MA+ D + RERRQ+E+IL+LDMEEL VE V+D GSSS D FLR +G
Sbjct: 1 MAEPDWILERERRQVEQILELDMEELQVEEVDDAGSSSSSE------VDTFLRNTHGDGG 54
Query: 57 ASTSGQFTFNTSLASLHTYLGEVDDTRGRVSLLDGGTILSLPMLYLQGVVLFPGATLPLR 116
+ TS FNTS+ SL T GEV D GR + LDGG +L LPM YLQGVVLFP A LP+R
Sbjct: 55 SRTSEALAFNTSVVSLPTCDGEVHDAPGRFAFLDGGVVLCLPMFYLQGVVLFPEAILPIR 114
Query: 117 LIQGRFVAAVEKALRQVDAPCTIGVVLMYKRHSTRHYANASVGTTAEIRQLGRMDDGSLN 176
++Q R + AV+KA+ VDAPC IGVV +Y+ + H+A ASVGTTAEI + ++DDGS N
Sbjct: 115 VVQPRSLTAVDKAVNHVDAPCMIGVVHVYQHTNDGHHAIASVGTTAEIHHIKQLDDGSSN 174
Query: 177 VVARGQQRFRLKRHWMXXXXXXXXXXQIIEEDTPLRTPRDAFAQLASCNSLRQHTSSPVI 236
VV RGQ RFRL+R W+ QIIEEDTP RTPRDAF QLA+ N + + ++
Sbjct: 175 VVTRGQNRFRLRRRWIDADDVQWGEVQIIEEDTPQRTPRDAFGQLAT-NYIFNQCGTSLL 233
Query: 237 SLDVSPIKQRDHVDSELDCGTPSPKSTASNHSAIXXXXXXXXXXXXXXXXXXNEDGIFMH 296
SL S +Q DHV+S+ D + S ST+S HS NED M
Sbjct: 234 SLGTSCFRQDDHVNSDQDWDSLSSTSTSSEHSV----------TDARTYCSSNEDEDLML 283
Query: 297 EQFYSQELHPLKGSAAVQS--GENTNMGEEDFCLTSLRSLSSAGTRDTKEQRQYILP--- 351
EQ + Q+ +K +A +++ + G+ + C S +SL + + +++R++
Sbjct: 284 EQSW-QKYDSVKRNAELENPVKHSNTRGKGEPCFQSPKSLPTK-NKGAEQRRRFCAAYSS 341
Query: 352 KQHFQAPLSFWPRWAYQMYDSYALARRAADLWRQIITHPSMDDYVRKPDLLSFSIGSKLP 411
K QAPLSFWPRWAY+MYDSY+LARR ADLWRQI+ +PSMDDYVRKPD+LS+ IGSKLP
Sbjct: 342 KLALQAPLSFWPRWAYEMYDSYSLARRVADLWRQIVVNPSMDDYVRKPDILSYHIGSKLP 401
Query: 412 VSESVRQKLLEIDGISYRLRREIQLLKAFNLIKCRCCKSLIAKRSDMVVMSTDGPLGAYV 471
+S SVRQ+LLEIDGISYRL++EIQLLKAFN+I+CR C +LI++RS DGP+GAYV
Sbjct: 402 MSCSVRQELLEIDGISYRLQKEIQLLKAFNIIRCRNCLALISRRS-------DGPVGAYV 454
Query: 472 NPHGFVHETITVSRATGLALDGNPSTVHSWFPGYSWTIASCTDCESNIGWLFKATKKNLR 531
E +TV ATGLAL G PS HS FPGY+WTIA C CESNIGWLF+A K NL
Sbjct: 455 KQFSCGQEMMTVYNATGLALRGAPSKAHSLFPGYTWTIALCAACESNIGWLFRAEKTNLL 514
Query: 532 PRSFWGIRSSQIADDAQ 548
P+SFWG+RSSQ++DD Q
Sbjct: 515 PKSFWGLRSSQVSDDTQ 531
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.133 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 18,448,086
Number of extensions: 761973
Number of successful extensions: 1929
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 1924
Number of HSP's successfully gapped: 2
Length of query: 554
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 448
Effective length of database: 11,501,117
Effective search space: 5152500416
Effective search space used: 5152500416
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 159 (65.9 bits)