Os05g0521500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase S16, lon N-terminal domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0521500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Peptidase S16, lon N-terminal domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 56.37 | 0.353 | 7.52 | 0.776 | 0.364 | 0.504 | -0.497 | 0.49 | 0.0988 | 5.68 | 21.2 | 1326 | -- | -- |
| 56.84 | 0.351 | 7.53 | 0.678 | 0.366 | 0.461 | -0.461 | -- | 0.0868 | 5.75 | 21.3 | 1213 | -- | -- |
| 56.97 | 0.352 | 7.52 | 0.767 | 0.361 | 0.508 | -- | 0.473 | 0.0982 | 5.74 | 21.2 | 1326 | -- | -- |
| 57.26 | 0.352 | 7.54 | 0.608 | 0.369 | 0.482 | -- | -- | 0.0562 | 5.79 | 21.3 | 2617 | -- | -- |
| 63.72 | 0.372 | 7.52 | 0.768 | -- | 0.527 | -- | 0.461 | 0.102 | -- | 21.21 | 1321 | -- | -- |
| 62.79 | 0.371 | 7.5 | 0.849 | 0.378 | -- | -0.53 | -- | 0.199 | 5.48 | -- | -- | -- | -- |
| 63.49 | 0.373 | 7.5 | 0.848 | 0.375 | -- | -- | -- | 0.201 | 5.51 | -- | -- | -- | -- |
| 63.94 | 0.372 | 7.54 | 0.604 | -- | 0.5 | -- | -- | 0.0633 | -- | 21.3 | 2650 | -- | -- |
| 63.48 | 0.371 | 7.56 | -- | 0.374 | 0.789 | -- | -- | -0.0667 | 5.75 | 20.1 | 6900 | -- | -- |
| 70.79 | 0.393 | 7.51 | 0.86 | -- | -- | -- | -- | 0.21 | -- | -- | -- | -- | -- |
| 82.42 | 0.425 | 7.52 | -- | 0.389 | -- | -- | -- | 0.107 | 5.42 | -- | -- | -- | -- |
| 70.39 | 0.391 | 7.57 | -- | -- | 0.804 | -- | -- | -0.0582 | -- | 20 | 6985 | -- | -- |
| 90.29 | 0.444 | 7.53 | -- | -- | -- | -- | -- | 0.115 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 55.85 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 2 | 55.88 | temperature | 15 | 10 | > th | dose dependent | rect. | 7 | 22 |
| 4 | 56.06 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 3 |
| 5 | 56.10 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 13 | 56.35 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 16 | 56.39 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 24 | 56.48 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 3 |
| 25 | 56.50 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 5 |
| 31 | 56.55 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 3 |
| 34 | 56.57 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 5 |
| 42 | 56.63 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 7 |
| 122 | 56.86 | radiation | 20 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 145 | 56.87 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 2 |
| 148 | 56.88 | temperature | 20 | 1440 | > th | dose independent | sin | 11 | NA |
| 162 | 56.89 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 2 |
| 200 | 56.97 | temperature | 20 | 1440 | < th | dose independent | sin | 12 | NA |
| 220 | 56.98 | temperature | 20 | 1440 | > th | dose independent | rect. | 12 | 18 |
| 291 | 57.07 | temperature | 20 | 1440 | < th | dose independent | rect. | 12 | 18 |
| 325 | 57.10 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 353 | 57.12 | wind | 5 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 369 | 57.13 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 19 |
| 408 | 57.16 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 645 | 57.32 | wind | 1 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 652 | 57.32 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 22 |
| 685 | 57.34 | temperature | 25 | 1440 | < th | dose dependent | sin | 12 | NA |
| 724 | 57.37 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 737 | 57.38 | temperature | 20 | 4320 | < th | dose independent | sin | 17 | NA |
| 767 | 57.40 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 23 |
| 768 | 57.40 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 23 |
| 810 | 57.42 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 812 | 57.42 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 23 |
| 919 | 57.48 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 920 | 57.48 | wind | 3 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 972 | 57.51 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 23 |