Os01g0743600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase S16, lon N-terminal domain containing protein.
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Os01g0743600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase S16, lon N-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 39.84 | 0.297 | 6.05 | -0.305 | 0.561 | -0.799 | -0.233 | -1.66 | 0.0329 | 0.49 | 20.62 | 6840 | -- | -- |
| 42.36 | 0.303 | 6.13 | -0.483 | 0.575 | -0.439 | -0.129 | -- | -0.0283 | 0.419 | 21.8 | 6910 | -- | -- |
| 39.98 | 0.294 | 6.04 | -0.303 | 0.564 | -0.856 | -- | -1.82 | 0.0367 | 0.479 | 20.4 | 6923 | -- | -- |
| 42.44 | 0.303 | 6.13 | -0.524 | 0.569 | -0.475 | -- | -- | -0.0452 | 0.481 | 21.76 | 6892 | -- | -- |
| 59.73 | 0.36 | 6.04 | -0.305 | -- | -0.871 | -- | -1.73 | 0.0206 | -- | 20.6 | 6798 | -- | -- |
| 47.72 | 0.324 | 6.09 | -0.206 | 0.589 | -- | -0.169 | -- | 0.131 | 0.513 | -- | -- | -- | -- |
| 47.85 | 0.324 | 6.09 | -0.199 | 0.589 | -- | -- | -- | 0.132 | 0.511 | -- | -- | -- | -- |
| 61.76 | 0.366 | 6.11 | -0.418 | -- | -0.532 | -- | -- | 0.0304 | -- | 25.1 | 5348 | -- | -- |
| 45.47 | 0.314 | 6.1 | -- | 0.566 | -0.35 | -- | -- | 0.0693 | 0.258 | 24.6 | 2954 | -- | -- |
| 69.62 | 0.39 | 6.08 | -0.179 | -- | -- | -- | -- | 0.142 | -- | -- | -- | -- | -- |
| 48.89 | 0.327 | 6.08 | -- | 0.586 | -- | -- | -- | 0.155 | 0.494 | -- | -- | -- | -- |
| 61.7 | 0.366 | 6.1 | -- | -- | -0.529 | -- | -- | 0.0331 | -- | 24.87 | 2419 | -- | -- |
| 70.47 | 0.392 | 6.07 | -- | -- | -- | -- | -- | 0.162 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 39.98 | humidity | 70 | 43200 | > th | dose independent | rect. | 22 | 11 |
| 5 | 40.08 | humidity | 70 | 43200 | < th | dose dependent | rect. | 21 | 13 |
| 6 | 40.09 | humidity | 70 | 43200 | < th | dose independent | rect. | 22 | 11 |
| 12 | 40.15 | humidity | 70 | 43200 | > th | dose independent | rect. | 6 | 3 |
| 23 | 40.20 | humidity | 70 | 43200 | < th | dose dependent | rect. | 4 | 6 |
| 25 | 40.21 | humidity | 70 | 43200 | < th | dose dependent | rect. | 6 | 4 |
| 31 | 40.29 | humidity | 70 | 43200 | < th | dose independent | rect. | 6 | 3 |
| 39 | 40.35 | humidity | 60 | 43200 | > th | dose independent | rect. | 19 | 15 |
| 40 | 40.35 | humidity | 60 | 43200 | < th | dose independent | rect. | 19 | 17 |
| 48 | 40.45 | humidity | 60 | 43200 | < th | dose independent | rect. | 24 | 12 |
| 50 | 40.46 | humidity | 60 | 43200 | < th | dose independent | rect. | 3 | 9 |
| 55 | 40.48 | humidity | 60 | 43200 | < th | dose independent | rect. | 7 | 5 |
| 84 | 40.69 | humidity | 60 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 95 | 40.71 | humidity | 60 | 43200 | < th | dose dependent | sin | 9 | NA |
| 116 | 40.78 | wind | 9 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 119 | 40.79 | radiation | 20 | 43200 | > th | dose independent | rect. | 17 | 14 |
| 120 | 40.82 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 123 | 40.82 | humidity | 60 | 43200 | < th | dose dependent | rect. | 17 | 20 |
| 128 | 40.85 | humidity | 60 | 43200 | < th | dose dependent | rect. | 19 | 19 |
| 130 | 40.87 | radiation | 20 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 152 | 40.89 | humidity | 60 | 43200 | < th | dose dependent | rect. | 4 | 10 |
| 161 | 40.90 | humidity | 60 | 43200 | < th | dose dependent | rect. | 7 | 7 |
| 165 | 40.91 | wind | 9 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 166 | 40.91 | radiation | 20 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 184 | 40.92 | humidity | 60 | 43200 | < th | dose dependent | rect. | 9 | 5 |
| 187 | 40.92 | radiation | 30 | 43200 | > th | dose dependent | rect. | 16 | 16 |
| 200 | 40.94 | temperature | 20 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 215 | 40.96 | humidity | 60 | 43200 | < th | dose dependent | rect. | 10 | 3 |
| 246 | 40.99 | temperature | 20 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 277 | 41.06 | temperature | 20 | 14400 | < th | dose dependent | rect. | 22 | 6 |
| 284 | 41.09 | humidity | 90 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 287 | 41.10 | radiation | 40 | 43200 | < th | dose independent | rect. | 19 | 13 |
| 293 | 41.11 | radiation | 40 | 43200 | < th | dose independent | rect. | 16 | 16 |
| 295 | 41.12 | radiation | 40 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 297 | 41.12 | radiation | 40 | 43200 | < th | dose independent | rect. | 22 | 10 |
| 302 | 41.13 | radiation | 40 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 352 | 41.22 | humidity | 60 | 43200 | < th | dose independent | sin | 9 | NA |
| 373 | 41.26 | wind | 9 | 43200 | > th | dose independent | rect. | 10 | 7 |
| 383 | 41.27 | temperature | 20 | 14400 | < th | dose dependent | sin | 10 | NA |
| 386 | 41.27 | temperature | 25 | 1440 | < th | dose dependent | rect. | 14 | 9 |
| 393 | 41.28 | wind | 1 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 395 | 41.28 | wind | 7 | 43200 | > th | dose dependent | rect. | 11 | 2 |
| 413 | 41.30 | temperature | 20 | 4320 | > th | dose independent | rect. | 3 | 1 |
| 429 | 41.31 | radiation | 30 | 43200 | > th | dose independent | rect. | 16 | 16 |
| 432 | 41.31 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 444 | 41.32 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 3 |
| 470 | 41.34 | temperature | 20 | 4320 | < th | dose independent | rect. | 3 | 1 |
| 488 | 41.35 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 1 |
| 504 | 41.35 | temperature | 20 | 270 | > th | dose dependent | rect. | 16 | 21 |
| 505 | 41.36 | radiation | 1 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 506 | 41.36 | radiation | 1 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 509 | 41.36 | radiation | 1 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 510 | 41.36 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 3 |
| 527 | 41.37 | radiation | 10 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 528 | 41.37 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 9 |
| 553 | 41.38 | wind | 9 | 43200 | < th | dose independent | rect. | 10 | 6 |
| 581 | 41.39 | temperature | 25 | 4320 | < th | dose dependent | sin | 16 | NA |
| 600 | 41.40 | radiation | 10 | 43200 | < th | dose independent | rect. | 19 | 11 |
| 604 | 41.40 | radiation | 10 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 645 | 41.41 | radiation | 10 | 43200 | < th | dose independent | rect. | 2 | 4 |
| 650 | 41.41 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 9 |
| 687 | 41.42 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 3 |
| 819 | 41.46 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 825 | 41.46 | radiation | 20 | 43200 | < th | dose independent | rect. | 17 | 14 |
| 855 | 41.47 | temperature | 20 | 14400 | < th | dose dependent | no | NA | NA |
| 858 | 41.47 | radiation | 1 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 868 | 41.48 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 869 | 41.48 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 3 |
| 921 | 41.50 | humidity | 90 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 936 | 41.50 | temperature | 20 | 14400 | < th | dose dependent | rect. | 2 | 23 |
| 939 | 41.51 | radiation | 1 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 945 | 41.51 | radiation | 1 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 961 | 41.52 | temperature | 20 | 4320 | < th | dose independent | sin | 14 | NA |
| 963 | 41.52 | radiation | 1 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 986 | 41.53 | radiation | 40 | 43200 | < th | dose independent | rect. | 15 | 2 |
| 991 | 41.53 | radiation | 40 | 43200 | < th | dose independent | rect. | 15 | 5 |