BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os05g0463300 Os05g0463300|Os05g0463300
         (538 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os05g0463300  IQ calmodulin-binding region domain containing...   585   e-167
Os01g0833800  IQ calmodulin-binding region domain containing...   111   1e-24
Os05g0123200  IQ calmodulin-binding region domain containing...    91   2e-18

>Os05g0463300 IQ calmodulin-binding region domain containing protein
          Length = 538

 Score =  585 bits (1508), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 325/538 (60%), Positives = 325/538 (60%)

Query: 1   MGKKGKWFDAVQRALSTSENDSHENEKKGKRSTLKKILQFXXXXXXXXXXXXXXXXXXXX 60
           MGKKGKWFDAVQRALSTSENDSHENEKKGKRSTLKKILQF                    
Sbjct: 1   MGKKGKWFDAVQRALSTSENDSHENEKKGKRSTLKKILQFSKSSASTSSPPVTSPSARQQ 60

Query: 61  XXXXXXXXXXXXXXXXXXXXGIKEAKSSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE 120
                               GIKEAKSSD                              E
Sbjct: 61  PHHHHPPPPQAAPPDRQRDDGIKEAKSSDAAAAAAQKTATATAVTRPTTTAPRAPARSAE 120

Query: 121 ELAAVKIQKACRVYLGRRSQXXXXXXXXXXXXXXXXVKRQTYEALYCMQTMTRVQTQIHS 180
           ELAAVKIQKACRVYLGRRSQ                VKRQTYEALYCMQTMTRVQTQIHS
Sbjct: 121 ELAAVKIQKACRVYLGRRSQRARGLDRLMLLLEGLAVKRQTYEALYCMQTMTRVQTQIHS 180

Query: 181 RRVKTEEDKKALKSQVHVKQSLDRIKIGESWDHGHQSKEQIETVLTMKQEXXXXXXXXXX 240
           RRVKTEEDKKALKSQVHVKQSLDRIKIGESWDHGHQSKEQIETVLTMKQE          
Sbjct: 181 RRVKTEEDKKALKSQVHVKQSLDRIKIGESWDHGHQSKEQIETVLTMKQEAALRRQRALA 240

Query: 241 XXFSHQETFICASLAASNVHGHRQPQXXXXXXXXXXXXXXXXXEPDHAGEQRPCSXXXXX 300
             FSHQETFICASLAASNVHGHRQPQ                 EPDHAGEQRPCS     
Sbjct: 241 YAFSHQETFICASLAASNVHGHRQPQLGMELGGAMDGGGEAVGEPDHAGEQRPCSRGGER 300

Query: 301 XXXXXXXXHVGADTHVDAGVGQVHPPAELPVAVDTHXXXXXXXXXXXXXXPGRQPVPEVG 360
                   HVGADTHVDAGVGQVHPPAELPVAVDTH              PGRQPVPEVG
Sbjct: 301 RRQREAGAHVGADTHVDAGVGQVHPPAELPVAVDTHAAVAVEDVGGAAVEPGRQPVPEVG 360

Query: 361 DGDDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHDXXXXXXXXXXXXX 420
           DGDDR                                        HD             
Sbjct: 361 DGDDRPAPHDEPAAGAAAELRAARGGERQPGPRREGRRRPPLAAAHDEPAVRGAAEEAEP 420

Query: 421 XXXXXXXXXXXXXXXXXXLHADDQVREGQGGSAGGDRGPRHRREDGARSPSGDLTVGDQQ 480
                             LHADDQVREGQGGSAGGDRGPRHRREDGARSPSGDLTVGDQQ
Sbjct: 421 RRRRRRPGERRRGAADAELHADDQVREGQGGSAGGDRGPRHRREDGARSPSGDLTVGDQQ 480

Query: 481 APFPGLRGQAEQRPVAEQGEGREVDAATLAASEPKVLISQQPNVNPVAAMLRSGWLVA 538
           APFPGLRGQAEQRPVAEQGEGREVDAATLAASEPKVLISQQPNVNPVAAMLRSGWLVA
Sbjct: 481 APFPGLRGQAEQRPVAEQGEGREVDAATLAASEPKVLISQQPNVNPVAAMLRSGWLVA 538



>Os01g0833800 IQ calmodulin-binding region domain containing protein
          Length = 500

 Score =  111 bits (277), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 66/130 (50%), Positives = 81/130 (62%), Gaps = 3/130 (2%)

Query: 120 EELAAVKIQKACRVYLGRRSQXXXXXXXXXXXXXX-XXVKRQTYEALYCMQTMTRVQTQI 178
           +ELAA+KIQ A R YL RR+                  VKRQT   L+C QTMTRVQTQI
Sbjct: 141 DELAAIKIQTAFRGYLARRALRALRGLVRLKSLVDGNAVKRQTAHTLHCTQTMTRVQTQI 200

Query: 179 HSRRVKTEEDKKALKSQVHVK--QSLDRIKIGESWDHGHQSKEQIETVLTMKQEXXXXXX 236
           +SRRVK EE+K+AL+ Q+ +K  + L+++KI E WDH HQSKEQ+ET L MKQE      
Sbjct: 201 YSRRVKMEEEKQALQRQLQLKHQRELEKMKIDEDWDHSHQSKEQVETSLMMKQEAALRRE 260

Query: 237 XXXXXXFSHQ 246
                 FSHQ
Sbjct: 261 RALAYAFSHQ 270



>Os05g0123200 IQ calmodulin-binding region domain containing protein
          Length = 304

 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/128 (42%), Positives = 70/128 (54%), Gaps = 1/128 (0%)

Query: 120 EELAAVKIQKACRVYLGRRSQXXXXXXXXXXXXXX-XXVKRQTYEALYCMQTMTRVQTQI 178
           EE A +KIQ A R YL RR+                  VKRQ    L CMQT+ RVQ+QI
Sbjct: 106 EEQATIKIQTAFRGYLARRALRALRGLVRLKSLVEGNSVKRQAASTLRCMQTLARVQSQI 165

Query: 179 HSRRVKTEEDKKALKSQVHVKQSLDRIKIGESWDHGHQSKEQIETVLTMKQEXXXXXXXX 238
            SRR+K  E+ +AL+ Q+ +KQ L+ +++GE WD   QSKEQIE  L  +QE        
Sbjct: 166 RSRRLKMSEENQALQRQLLLKQELESLRMGEQWDDSTQSKEQIEASLISRQEAAVRRERA 225

Query: 239 XXXXFSHQ 246
               FSHQ
Sbjct: 226 LAYAFSHQ 233



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.312    0.129    0.376 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,598,300
Number of extensions: 401420
Number of successful extensions: 1475
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 1471
Number of HSP's successfully gapped: 5
Length of query: 538
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 432
Effective length of database: 11,501,117
Effective search space: 4968482544
Effective search space used: 4968482544
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 158 (65.5 bits)