BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os05g0450600 Os05g0450600|AK064266
         (471 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os05g0450600  Protein of unknown function DUF740 family protein   691   0.0  
Os01g0852400  Protein of unknown function DUF740 family protein   419   e-117

>Os05g0450600 Protein of unknown function DUF740 family protein
          Length = 471

 Score =  691 bits (1784), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/471 (76%), Positives = 358/471 (76%)

Query: 1   MAEESDEITPVVEPILVVDTSGEMETEANGGREAKAMKDHIDLECSQAKKPQPKDLKEIA 60
           MAEESDEITPVVEPILVVDTSGEMETEANGGREAKAMKDHIDLECSQAKKPQPKDLKEIA
Sbjct: 1   MAEESDEITPVVEPILVVDTSGEMETEANGGREAKAMKDHIDLECSQAKKPQPKDLKEIA 60

Query: 61  GSFWLAASVFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLRRSRLRGEAC 120
           GSFWLAASVFS                                     FLRRSRLRGEAC
Sbjct: 61  GSFWLAASVFSKKWQKWRRKQKLKKQDAAGSKAAAAAMPPPEKPSKPSFLRRSRLRGEAC 120

Query: 121 SEFAGGRRSCDTDPRFSLDAGRMSVDDVGFSWDEPRASWDGYLFGAGTGIXXXXXXXXXX 180
           SEFAGGRRSCDTDPRFSLDAGRMSVDDVGFSWDEPRASWDGYLFGAGTGI          
Sbjct: 121 SEFAGGRRSCDTDPRFSLDAGRMSVDDVGFSWDEPRASWDGYLFGAGTGIGLGRAPPPLS 180

Query: 181 XXXXXXXXMEDSPAGIVERSDGQIPVEDDSQPEPDPDADTPGGSVQTRDYYDTXXXXXXX 240
                   MEDSPAGIVERSDGQIPVEDDSQPEPDPDADTPGGSVQTRDYYDT       
Sbjct: 181 RLPPILSAMEDSPAGIVERSDGQIPVEDDSQPEPDPDADTPGGSVQTRDYYDTSSSSRRR 240

Query: 241 XXXXXXXXXXXPSFEVTDAKPVLPAAAAITSVKDSPLIGSSEFYHFQHAEDLLEHHRFST 300
                      PSFEVTDAKPVLPAAAAITSVKDSPLIGSSEFYHFQHAEDLLEHHRFST
Sbjct: 241 RSLERTSSVRRPSFEVTDAKPVLPAAAAITSVKDSPLIGSSEFYHFQHAEDLLEHHRFST 300

Query: 301 SSLIEDFPMSLDAAFPGPDKKPRRWRKAWSLWGLIHXXXXXXXXXXXXXXXXXFSEPWPE 360
           SSLIEDFPMSLDAAFPGPDKKPRRWRKAWSLWGLIH                 FSEPWPE
Sbjct: 301 SSLIEDFPMSLDAAFPGPDKKPRRWRKAWSLWGLIHRRAAGRRGGASDVADRAFSEPWPE 360

Query: 361 LRVRGCNARMQRCXXXXXXXXXXXXXXXXXXXXXXXYVDGNGNVVKRRREECALERNRSA 420
           LRVRGCNARMQRC                       YVDGNGNVVKRRREECALERNRSA
Sbjct: 361 LRVRGCNARMQRCNSNASARSSFSSNSGGLGSSRRSYVDGNGNVVKRRREECALERNRSA 420

Query: 421 RYSPGHADNGMLRFYLTPMRSASGRRAPGLPAKGGRQLRSQSFARSMLRLY 471
           RYSPGHADNGMLRFYLTPMRSASGRRAPGLPAKGGRQLRSQSFARSMLRLY
Sbjct: 421 RYSPGHADNGMLRFYLTPMRSASGRRAPGLPAKGGRQLRSQSFARSMLRLY 471



>Os01g0852400 Protein of unknown function DUF740 family protein
          Length = 651

 Score =  419 bits (1078), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 262/484 (54%), Positives = 284/484 (58%), Gaps = 33/484 (6%)

Query: 4   ESDEITPVVEPILVVDTSGEMETEANG-GREAKAMKDHIDLECSQAKKPQPKDLKEIAGS 62
           E DEI PVVEP++VVDTSGE+ETE N   RE KAMKDH+D E SQ KKP  KDLKE   S
Sbjct: 185 EHDEIMPVVEPVIVVDTSGEIETEPNVVAREGKAMKDHMDFESSQPKKPPTKDLKE---S 241

Query: 63  FWLAASVFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLRRSRLRGEACSE 122
           FW+AASVFS                                     FLRR RLRGEA SE
Sbjct: 242 FWVAASVFSKKWQKWRRKQKLKKEAAVSKAAAAAMPPPEKPSKPS-FLRRRRLRGEAGSE 300

Query: 123 FAGGRRSCDTDPRFSLDAGRMSVDDVGFSWDEPRASWDGYLFGAGTGIXXXXXXXXXXXX 182
            AGGRRSCDTDPRFSLDAGRMSVDD GFSWDEPRASWDGYLFGAG GI            
Sbjct: 301 LAGGRRSCDTDPRFSLDAGRMSVDDAGFSWDEPRASWDGYLFGAGAGIGLGRAPPPLSRL 360

Query: 183 XXXXXXMEDSPAGIVERSDGQIPVEDDSQPEPDPDADTPGGSVQTRDYYDTXXXXXXXXX 242
                 +ED+PA IVERSDGQIPVEDD+      D D PGGS+QTRDYY           
Sbjct: 361 PPMMSVLEDTPATIVERSDGQIPVEDDA------DIDPPGGSLQTRDYY-LDSSTRRRRS 413

Query: 243 XXXXXXXXXPSFEVTDAKPVLPAAAAITSVKDSPLIGSSEFYHFQHAEDLLEHHRFSTSS 302
                    PSFEVT+ K   PA   I + K+SPL G SEFYHF HAEDLL+   FS++S
Sbjct: 414 LERSSSVRRPSFEVTEPK---PAPTTIANGKESPL-GGSEFYHFHHAEDLLDRG-FSSNS 468

Query: 303 LIEDFPMSLDAAFPGPD--KKPRRWRKAWSLWGLIHXXXXXXXXXX-XXXXXXXFSEPWP 359
           LIED   SL+AA  GP   KKPRRWRKAWSLWG IH                  FSE WP
Sbjct: 469 LIEDISASLEAALSGPGSAKKPRRWRKAWSLWGFIHRRASGRRSGGPSDIADRSFSEAWP 528

Query: 360 ELRVRGCNARMQRCXXXXXXXXXXXXXXXXXXXXXXXYVDGNGNVVKRRREECALERNRS 419
           +LRVRG N +MQRC                       +VD NG+   RRREE  LERNRS
Sbjct: 529 DLRVRGYNPKMQRCNSNLSARSSFSSNSGGLGSSRRSHVDVNGSSA-RRREEHVLERNRS 587

Query: 420 ARYS-PGHADNGMLRFYLTPMRS-----------ASGRRAPGLPAKGGRQLRSQSFARSM 467
           ARYS PG  DNGMLRFYLTPMRS             G    GLPAK GRQL SQSFARS+
Sbjct: 588 ARYSPPGRVDNGMLRFYLTPMRSGGGGGGARRGGGGGGGGGGLPAKAGRQLTSQSFARSL 647

Query: 468 LRLY 471
           LR+Y
Sbjct: 648 LRMY 651



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.317    0.134    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,857,095
Number of extensions: 573693
Number of successful extensions: 1651
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 1639
Number of HSP's successfully gapped: 3
Length of query: 471
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 367
Effective length of database: 11,605,545
Effective search space: 4259235015
Effective search space used: 4259235015
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 158 (65.5 bits)