Os05g0450600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF740 family protein.
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Os05g0450600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF740 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 155.11 | 0.585 | 4.13 | -1.06 | 1.5 | 2.14 | -0.556 | -0.138 | -0.0434 | 19.9 | 15.67 | 242 | 7.8 | -- |
| 154.71 | 0.579 | 4.13 | -1.06 | 1.64 | 1.84 | -0.542 | -- | -0.0679 | 20.6 | 17.89 | 226 | 7.66 | -- |
| 155.56 | 0.581 | 4.14 | -1.09 | 1.48 | 2.13 | -- | -0.644 | -0.083 | 20.1 | 16.43 | 240 | 7.85 | -- |
| 155.53 | 0.581 | 4.14 | -1.06 | 1.68 | 1.84 | -- | -- | -0.0699 | 20.6 | 17.9 | 241 | 7.7 | -- |
| 162.72 | 0.594 | 4.1 | -1.05 | -- | 3.16 | -- | -0.581 | -0.0432 | -- | 7.572 | 105 | 8.71 | -- |
| 202.22 | 0.667 | 4.11 | -0.698 | 2.62 | -- | 0.0406 | -- | 0.214 | 21.4 | -- | -- | -- | -- |
| 202.23 | 0.666 | 4.11 | -0.7 | 2.62 | -- | -- | -- | 0.214 | 21.4 | -- | -- | -- | -- |
| 163.44 | 0.595 | 4.08 | -0.998 | -- | 3.15 | -- | -- | -0.00142 | -- | 7.109 | 119 | 8.83 | -- |
| 183.86 | 0.632 | 4.15 | -- | 1.66 | 1.81 | -- | -- | -0.0689 | 20.5 | 17.64 | 211 | 7.49 | -- |
| 604.18 | 1.15 | 4.03 | -0.685 | -- | -- | -- | -- | 0.204 | -- | -- | -- | -- | -- |
| 215.14 | 0.686 | 4.09 | -- | 2.62 | -- | -- | -- | 0.291 | 21.4 | -- | -- | -- | -- |
| 187.76 | 0.638 | 4.04 | -- | -- | 3.13 | -- | -- | 0.157 | -- | 1.969 | 252 | 10.1 | -- |
| 616.56 | 1.16 | 4.02 | -- | -- | -- | -- | -- | 0.28 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 143.69 | temperature | 20 | 270 | > th | dose dependent | rect. | 16 | 8 |
| 12 | 149.50 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 13 |
| 55 | 154.93 | temperature | 25 | 270 | > th | dose independent | rect. | 15 | 8 |
| 64 | 155.57 | temperature | 15 | 270 | > th | dose dependent | sin | 14 | NA |
| 66 | 155.67 | temperature | 30 | 270 | < th | dose dependent | sin | 15 | NA |
| 72 | 156.14 | temperature | 15 | 90 | > th | dose dependent | sin | 12 | NA |
| 163 | 158.12 | temperature | 20 | 10 | > th | dose independent | rect. | 16 | 10 |
| 177 | 158.48 | temperature | 20 | 270 | > th | dose dependent | rect. | 16 | 17 |
| 422 | 162.74 | temperature | 25 | 270 | < th | dose independent | rect. | 12 | 15 |
| 461 | 163.41 | temperature | 25 | 270 | < th | dose independent | rect. | 15 | 12 |
| 490 | 163.59 | temperature | 20 | 90 | > th | dose independent | rect. | 16 | 19 |
| 498 | 163.69 | temperature | 20 | 10 | > th | dose independent | rect. | 16 | 20 |
| 519 | 163.91 | temperature | 20 | 720 | > th | dose dependent | rect. | 13 | 7 |
| 542 | 164.21 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 3 |
| 550 | 164.31 | temperature | 25 | 270 | < th | dose independent | sin | 16 | NA |
| 641 | 165.20 | temperature | 25 | 270 | > th | dose independent | sin | 16 | NA |
| 654 | 165.29 | temperature | 20 | 10 | < th | dose independent | rect. | 16 | 13 |
| 680 | 165.46 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 721 | 165.73 | temperature | 30 | 720 | < th | dose dependent | rect. | 12 | 8 |
| 730 | 165.84 | temperature | 25 | 270 | > th | dose independent | rect. | 15 | 17 |
| 811 | 166.47 | temperature | 20 | 10 | > th | dose independent | sin | 13 | NA |
| 826 | 166.58 | temperature | 25 | 270 | > th | dose independent | rect. | 14 | 19 |
| 855 | 166.78 | temperature | 20 | 10 | < th | dose independent | sin | 13 | NA |
| 990 | 167.65 | temperature | 20 | 720 | > th | dose dependent | sin | 19 | NA |