BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os05g0406100 Os05g0406100|AK069515
         (746 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os05g0406100  Inosine/uridine-preferring nucleoside hydrolas...  1543   0.0  
Os05g0406200  Inosine/uridine-preferring nucleoside hydrolas...   995   0.0  

>Os05g0406100 Inosine/uridine-preferring nucleoside hydrolase domain containing
           protein
          Length = 746

 Score = 1543 bits (3994), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 746/746 (100%), Positives = 746/746 (100%)

Query: 1   MPAMCVLQGTSTAGGCRYRQAVPAGRGGRLDVDTNSGVRRGFLPQGRRRYRPVTQPTAQR 60
           MPAMCVLQGTSTAGGCRYRQAVPAGRGGRLDVDTNSGVRRGFLPQGRRRYRPVTQPTAQR
Sbjct: 1   MPAMCVLQGTSTAGGCRYRQAVPAGRGGRLDVDTNSGVRRGFLPQGRRRYRPVTQPTAQR 60

Query: 61  VMADTVSGGPTTVLLFGAHTNLALLLMAHPRLARNIDRVYVSGGAVRAADPAGNLFTAFA 120
           VMADTVSGGPTTVLLFGAHTNLALLLMAHPRLARNIDRVYVSGGAVRAADPAGNLFTAFA
Sbjct: 61  VMADTVSGGPTTVLLFGAHTNLALLLMAHPRLARNIDRVYVSGGAVRAADPAGNLFTAFA 120

Query: 121 TNPFAEFNIFGDPFAAYQVIHSGIPITMIPLDATNTISVTEEFVSEFQQHQQTYEAQYCF 180
           TNPFAEFNIFGDPFAAYQVIHSGIPITMIPLDATNTISVTEEFVSEFQQHQQTYEAQYCF
Sbjct: 121 TNPFAEFNIFGDPFAAYQVIHSGIPITMIPLDATNTISVTEEFVSEFQQHQQTYEAQYCF 180

Query: 181 QSLDKVLMRLRGRSNGHGNTSYYMWDSFAAGVALSSMRNGEVDGENEFSELEYMNITVIT 240
           QSLDKVLMRLRGRSNGHGNTSYYMWDSFAAGVALSSMRNGEVDGENEFSELEYMNITVIT
Sbjct: 181 QSLDKVLMRLRGRSNGHGNTSYYMWDSFAAGVALSSMRNGEVDGENEFSELEYMNITVIT 240

Query: 241 SNKPYGKRDGSNPFFDGRATPKLGLKEGGVHSGHVQTGIRDSFCLVPGSNRGRCEDGYTR 300
           SNKPYGKRDGSNPFFDGRATPKLGLKEGGVHSGHVQTGIRDSFCLVPGSNRGRCEDGYTR
Sbjct: 241 SNKPYGKRDGSNPFFDGRATPKLGLKEGGVHSGHVQTGIRDSFCLVPGSNRGRCEDGYTR 300

Query: 301 EVSGPEGVRVRVATRAKPNTDKNSSLEKEFSKSFLEVLNRPEQTGLFNINTQFPYYREVL 360
           EVSGPEGVRVRVATRAKPNTDKNSSLEKEFSKSFLEVLNRPEQTGLFNINTQFPYYREVL
Sbjct: 301 EVSGPEGVRVRVATRAKPNTDKNSSLEKEFSKSFLEVLNRPEQTGLFNINTQFPYYREVL 360

Query: 361 YKPVFRNVSRGKPVIFDMDMSPGDFVSLIYLLKTPIEVIDLKAVLVNGNGWANIASIDIV 420
           YKPVFRNVSRGKPVIFDMDMSPGDFVSLIYLLKTPIEVIDLKAVLVNGNGWANIASIDIV
Sbjct: 361 YKPVFRNVSRGKPVIFDMDMSPGDFVSLIYLLKTPIEVIDLKAVLVNGNGWANIASIDIV 420

Query: 421 YDILHMMGRDDIPVGLGNTTALGIPTLGCNNSYAIPHGSGGFIDSDTLYGLARSLPRSPR 480
           YDILHMMGRDDIPVGLGNTTALGIPTLGCNNSYAIPHGSGGFIDSDTLYGLARSLPRSPR
Sbjct: 421 YDILHMMGRDDIPVGLGNTTALGIPTLGCNNSYAIPHGSGGFIDSDTLYGLARSLPRSPR 480

Query: 481 RYAPESLDHPEDRQPLALEVWQSVRKQLDPGEKITVLTNGPLTNMANISLSDRDASSVIE 540
           RYAPESLDHPEDRQPLALEVWQSVRKQLDPGEKITVLTNGPLTNMANISLSDRDASSVIE
Sbjct: 481 RYAPESLDHPEDRQPLALEVWQSVRKQLDPGEKITVLTNGPLTNMANISLSDRDASSVIE 540

Query: 541 RVYVVGGLIKDGGDENGNLFTVPSNKHAEFNIFLDPLAAKTVLESDLKIALIPLTAQRKA 600
           RVYVVGGLIKDGGDENGNLFTVPSNKHAEFNIFLDPLAAKTVLESDLKIALIPLTAQRKA
Sbjct: 541 RVYVVGGLIKDGGDENGNLFTVPSNKHAEFNIFLDPLAAKTVLESDLKIALIPLTAQRKA 600

Query: 601 ASFRAVLAALEDIQHTHESKFVHELLSLLQELQIKQKLYHHLDIFLGEILGAVYMVEGSG 660
           ASFRAVLAALEDIQHTHESKFVHELLSLLQELQIKQKLYHHLDIFLGEILGAVYMVEGSG
Sbjct: 601 ASFRAVLAALEDIQHTHESKFVHELLSLLQELQIKQKLYHHLDIFLGEILGAVYMVEGSG 660

Query: 661 LKPSVELKPVSVIANTNKSTDGQIVISKNSAKLVRVLSDFDGEIYSKQLANSLANKRQSA 720
           LKPSVELKPVSVIANTNKSTDGQIVISKNSAKLVRVLSDFDGEIYSKQLANSLANKRQSA
Sbjct: 661 LKPSVELKPVSVIANTNKSTDGQIVISKNSAKLVRVLSDFDGEIYSKQLANSLANKRQSA 720

Query: 721 VIGSFEEQKAIWSRPVNSSGNIKKQK 746
           VIGSFEEQKAIWSRPVNSSGNIKKQK
Sbjct: 721 VIGSFEEQKAIWSRPVNSSGNIKKQK 746



>Os05g0406200 Inosine/uridine-preferring nucleoside hydrolase domain containing
           protein
          Length = 887

 Score =  995 bits (2573), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 495/762 (64%), Positives = 581/762 (76%), Gaps = 33/762 (4%)

Query: 8   QGTSTAGGCRYRQAVPAGRGGRLDVDTNSGVRRGFLPQGRRRYRPVTQPTAQRVMADTVS 67
           QG +T G CRYRQA+P   GGRLD+DTNSG+R+GFLPQG RRY P+ Q TAQ+V+ +T+S
Sbjct: 129 QGMTTFGPCRYRQAIPLEGGGRLDIDTNSGIRKGFLPQGNRRYIPLHQSTAQQVLIETIS 188

Query: 68  GGPTTVLLFGAHTNLALLLMAHPRLARNIDRVYVSGGAVRAADPAG-------------- 113
            GPTTV+L G+HTN A+ LM HP L +N++ +Y+ GG VR+ +P G              
Sbjct: 189 AGPTTVMLIGSHTNFAIFLMTHPHLKKNVEHIYIMGGGVRSENPTGCCPKNSTTSCTPQQ 248

Query: 114 -----NLFTAFATNPFAEFNIFGDPFAAYQVIHSGIPITMIPLDATNTISVTEEFVSEFQ 168
                NLFT++ TNP AEFN+F DPFAAYQV HSGI IT++PLDATNTI V EEF   FQ
Sbjct: 249 CGDHGNLFTSYRTNPNAEFNMFADPFAAYQVFHSGIAITLVPLDATNTIPVNEEFFYAFQ 308

Query: 169 QHQQTYEAQYCFQSLDKVLMRLRGRSNGHGNTSYYMWDSFAAGVALSSMRN-GEVDGENE 227
           Q Q TYEAQYCF SL    M      N    TSY+MWDSF +GVALSSMRN      EN+
Sbjct: 309 QQQSTYEAQYCFDSLK---MARDTWFNDEFYTSYFMWDSFTSGVALSSMRNDNNCQSEND 365

Query: 228 FSELEYMNITVITSNKPYGKRDGSNPFFDGRATPKLGLKEGGVHSGHVQTGIRDSFCLVP 287
           F+EL+YMNITVITSNKPYG  DGSNP FD    PK GL++GGVHSGHVQTGI DSFCL  
Sbjct: 366 FAELKYMNITVITSNKPYGIHDGSNPLFDDHVIPKFGLQKGGVHSGHVQTGITDSFCLAK 425

Query: 288 GSNRGRCEDGYTREVSGPEGVRVRVATRAKPNTDKNSSLEKEFSKSFLEVLNRPEQTGLF 347
            S +GRCEDGYT+E SGPE VRV VAT+AK N DK+S L++EF KSFLE LN PE TGLF
Sbjct: 426 ESKKGRCEDGYTKEESGPEAVRVCVATKAKVNVDKSSLLDREFFKSFLETLNLPENTGLF 485

Query: 348 NINTQFPYYREVLYKPVFRNVSRGKPVIFDMDMSPGDFVSLIYLLKTPIEVIDLKAVLVN 407
           NI  QFP+YREVLY P F N SRGKPVIFDMDMSPGDF+SLIYLLK P E+IDLK +LV+
Sbjct: 486 NITAQFPFYREVLYSPDFTNKSRGKPVIFDMDMSPGDFISLIYLLKVPTELIDLKGILVS 545

Query: 408 GNGWANIASIDIVYDILHMMGRDDIPVGLGNTTALGIPTLGCNNSYAIPHGSGGFIDSDT 467
           GNGWAN+ASIDIVYDILHMMGRDDIPVG G+T+ALG  +LGC    AIP GSGG +DSDT
Sbjct: 546 GNGWANVASIDIVYDILHMMGRDDIPVGRGSTSALGTESLGCKYVSAIPQGSGGLLDSDT 605

Query: 468 LYGLARSLPRSPRRY---------APESLDHPEDRQPLALEVWQSVRKQLDPGEKITVLT 518
           LYGLARSLPRSPRRY         AP   DHPE RQPLA EVWQ V+ QLDP EKIT+LT
Sbjct: 606 LYGLARSLPRSPRRYTAENSVKYGAPRDTDHPELRQPLAFEVWQFVKHQLDPNEKITILT 665

Query: 519 NGPLTNMANISLSDRDASSVIERVYVVGGLIKDGGDENGNLFTVPSNKHAEFNIFLDPLA 578
           NGPLTN+ANI LSDR+ASSVI+ VYVVGG I+D  +  GN+F+VPSN +AEFNIFLDPLA
Sbjct: 666 NGPLTNLANIVLSDRNASSVIKSVYVVGGHIRDDSNTKGNVFSVPSNTYAEFNIFLDPLA 725

Query: 579 AKTVLESDLKIALIPLTAQRKAASFRAVLAALEDIQHTHESKFVHELLSLLQELQIKQKL 638
           AKTVL+S L I LIPL AQRKAASF A+L AL+  + T ES+FVH LL+LL +LQ K +L
Sbjct: 726 AKTVLDSTLDITLIPLRAQRKAASFHALLEALKHAE-TPESRFVHHLLTLLHDLQQKHQL 784

Query: 639 YHHLDIFLGEILGAVYMVEGSGLKPSVELKPVSVIANTNKSTDGQIVISKNSAKLVRVLS 698
           YHH+D+FLGE+LGAV +VEGS +K S++ KP+S++AN+  S DGQ V+   SA LV+VL 
Sbjct: 785 YHHMDMFLGELLGAVSLVEGSNIKQSLQRKPISIVANSTTSIDGQTVVDNQSANLVKVLL 844

Query: 699 DFDGEIYSKQLANSLANKRQSAVIGSFEEQKAIWSRPVNSSG 740
           DF+ E Y K++ANSL +K +SAVI  F EQ+AIWS P  + G
Sbjct: 845 DFNSEEYYKRVANSLGDKERSAVISGFAEQRAIWSNPPENGG 886




 Score = 96.7 bits (239), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 80/280 (28%), Positives = 122/280 (43%), Gaps = 54/280 (19%)

Query: 402 KAVLVNGNGWANIA-SIDIVYDILHMMGRDDIPV----------------GLGNTTAL-- 442
           +AV ++ N W +   +++ +YD+L+MMGRDDIPV                 +G    L  
Sbjct: 69  QAVTIDVNAWTDAGHAVNHLYDMLYMMGRDDIPVGVGGDGGISGHGTIHPNVGGYLPLID 128

Query: 443 -GIPTLG-CNNSYAIPHGSGGFIDSDTLYGLARS-LPRSPRRYAPESLDHPEDRQPLALE 499
            G+ T G C    AIP   GG +D DT  G+ +  LP+  RRY            PL   
Sbjct: 129 QGMTTFGPCRYRQAIPLEGGGRLDIDTNSGIRKGFLPQGNRRYI-----------PLHQS 177

Query: 500 VWQSVRKQLDPGEKITVLTNGPLTNMANISLSDRDASSVIERVYVVGGLIK--------- 550
             Q V  +       TV+  G  TN A   ++       +E +Y++GG ++         
Sbjct: 178 TAQQVLIETISAGPTTVMLIGSHTNFAIFLMTHPHLKKNVEHIYIMGGGVRSENPTGCCP 237

Query: 551 ----------DGGDENGNLFT-VPSNKHAEFNIFLDPLAAKTVLESDLKIALIPLTAQRK 599
                       GD +GNLFT   +N +AEFN+F DP AA  V  S + I L+PL A   
Sbjct: 238 KNSTTSCTPQQCGD-HGNLFTSYRTNPNAEFNMFADPFAAYQVFHSGIAITLVPLDATNT 296

Query: 600 AASFRAVLAALEDIQHTHESKFVHELLSLLQELQIKQKLY 639
                    A +  Q T+E+++  + L + ++     + Y
Sbjct: 297 IPVNEEFFYAFQQQQSTYEAQYCFDSLKMARDTWFNDEFY 336



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.318    0.135    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 26,198,994
Number of extensions: 1179714
Number of successful extensions: 2647
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 2637
Number of HSP's successfully gapped: 3
Length of query: 746
Length of database: 17,035,801
Length adjustment: 108
Effective length of query: 638
Effective length of database: 11,396,689
Effective search space: 7271087582
Effective search space used: 7271087582
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 160 (66.2 bits)