BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os05g0381700 Os05g0381700|AK068838
         (643 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os05g0381700  Calmodulin-binding, plant family protein           1206   0.0  
Os01g0950700  Similar to Pathogen-induced calmodulin-binding...   165   8e-41

>Os05g0381700 Calmodulin-binding, plant family protein
          Length = 643

 Score = 1206 bits (3119), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 609/643 (94%), Positives = 609/643 (94%)

Query: 1   MQEEKNFAAVCKLGIPEQELAETADNIPDECCKEETSMEQDEGGDGTNMESESISEVAEH 60
           MQEEKNFAAVCKLGIPEQELAETADNIPDECCKEETSMEQDEGGDGTNMESESISEVAEH
Sbjct: 1   MQEEKNFAAVCKLGIPEQELAETADNIPDECCKEETSMEQDEGGDGTNMESESISEVAEH 60

Query: 61  PNVEDEENTQDDXXXXXXXXXXXXXXXXXXXDFSEEVTSKYVSEGEISDSGAIVSLHVEM 120
           PNVEDEENTQDD                   DFSEEVTSKYVSEGEISDSGAIVSLHVEM
Sbjct: 61  PNVEDEENTQDDGGSEMEISEEIISGFGCEEDFSEEVTSKYVSEGEISDSGAIVSLHVEM 120

Query: 121 QKQPVENHAFEQDDSSTADNAFHQDDSTADRAFDQDDIRADGYDDSQKELDIGMREFRVA 180
           QKQPVENHAFEQDDSSTADNAFHQDDSTADRAFDQDDIRADGYDDSQKELDIGMREFRVA
Sbjct: 121 QKQPVENHAFEQDDSSTADNAFHQDDSTADRAFDQDDIRADGYDDSQKELDIGMREFRVA 180

Query: 181 SEEVGIQEANSDDPVDCTEDANMELGVFLCDLQDASEGSGIAQESSQEGNSACFNDGAQM 240
           SEEVGIQEANSDDPVDCTEDANMELGVFLCDLQDASEGSGIAQESSQEGNSACFNDGAQM
Sbjct: 181 SEEVGIQEANSDDPVDCTEDANMELGVFLCDLQDASEGSGIAQESSQEGNSACFNDGAQM 240

Query: 241 VPDITTQTTEDASEESDTAQETTLDDNSTPLAAGAQMELGIGTSELIEGSSDVTEQSGIA 300
           VPDITTQTTEDASEESDTAQETTLDDNSTPLAAGAQMELGIGTSELIEGSSDVTEQSGIA
Sbjct: 241 VPDITTQTTEDASEESDTAQETTLDDNSTPLAAGAQMELGIGTSELIEGSSDVTEQSGIA 300

Query: 301 EETCQDDNAGYFSDDDSQKATVITTCQLQVDYEENVIAQEADDNSTGVRDDAQNEPEQTC 360
           EETCQDDNAGYFSDDDSQKATVITTCQLQVDYEENVIAQEADDNSTGVRDDAQNEPEQTC
Sbjct: 301 EETCQDDNAGYFSDDDSQKATVITTCQLQVDYEENVIAQEADDNSTGVRDDAQNEPEQTC 360

Query: 361 ELATSEECHFTQKTIQNHGALEESVVIASASEDAHEESDPTQDGHEEDYSVGINSGAQKE 420
           ELATSEECHFTQKTIQNHGALEESVVIASASEDAHEESDPTQDGHEEDYSVGINSGAQKE
Sbjct: 361 ELATSEECHFTQKTIQNHGALEESVVIASASEDAHEESDPTQDGHEEDYSVGINSGAQKE 420

Query: 421 GELDTSESGGASEGTTVHQEDDGHVNTTDLNGSAQKEITVSILDDXXXXXXXXXXXXXXX 480
           GELDTSESGGASEGTTVHQEDDGHVNTTDLNGSAQKEITVSILDD               
Sbjct: 421 GELDTSESGGASEGTTVHQEDDGHVNTTDLNGSAQKEITVSILDDSEELCSSEENNQSSN 480

Query: 481 MLIPEFSDNFSAEEPQNQDSVAKESSLDDICNAFSGMHLKGDAYLDPTESMTCPGNRLII 540
           MLIPEFSDNFSAEEPQNQDSVAKESSLDDICNAFSGMHLKGDAYLDPTESMTCPGNRLII
Sbjct: 481 MLIPEFSDNFSAEEPQNQDSVAKESSLDDICNAFSGMHLKGDAYLDPTESMTCPGNRLII 540

Query: 541 ARRRRTPEEEEYLRGFNPRAPNFLPLELDPESEKVDLKHQMMDERKNAEEWMIDYALRRA 600
           ARRRRTPEEEEYLRGFNPRAPNFLPLELDPESEKVDLKHQMMDERKNAEEWMIDYALRRA
Sbjct: 541 ARRRRTPEEEEYLRGFNPRAPNFLPLELDPESEKVDLKHQMMDERKNAEEWMIDYALRRA 600

Query: 601 VNNLGPARKKKVELLVQAFETVLPHDEEEKKGITPTRPVQACN 643
           VNNLGPARKKKVELLVQAFETVLPHDEEEKKGITPTRPVQACN
Sbjct: 601 VNNLGPARKKKVELLVQAFETVLPHDEEEKKGITPTRPVQACN 643



>Os01g0950700 Similar to Pathogen-induced calmodulin-binding protein (Fragment)
          Length = 434

 Score =  165 bits (418), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 84/139 (60%), Positives = 104/139 (74%), Gaps = 4/139 (2%)

Query: 505 SSLDDICNAFSGMHLKGDAYLDPTESMTCPGNRLIIARRRRTPEEEEYLRGFNPRAPNFL 564
           SS+DDI +AF GM+ K DA  DPT + +    R  IA+R  T E+ E +R FNPRAPNFL
Sbjct: 300 SSIDDISSAFGGMNFK-DACPDPTGAASSQRKRWNIAKRT-TSEQGEKMRLFNPRAPNFL 357

Query: 565 PLELDPESEKVDLKHQMMDERKNAEEWMIDYALRRAVNNLGPARKKKVELLVQAFETVLP 624
           P+E DPE+EKVDL+HQMM +RKNAEEWM+DYALRRAVN L  A+K+KVE+LVQAFETV  
Sbjct: 358 PVEPDPEAEKVDLRHQMMGDRKNAEEWMVDYALRRAVNKLARAQKRKVEMLVQAFETV-- 415

Query: 625 HDEEEKKGITPTRPVQACN 643
             +++KK IT T+  Q C 
Sbjct: 416 QQDDDKKSITLTKSSQPCR 434



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.306    0.125    0.344 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 21,588,972
Number of extensions: 934515
Number of successful extensions: 2545
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 2528
Number of HSP's successfully gapped: 2
Length of query: 643
Length of database: 17,035,801
Length adjustment: 107
Effective length of query: 536
Effective length of database: 11,448,903
Effective search space: 6136612008
Effective search space used: 6136612008
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 159 (65.9 bits)