BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os04g0681600 Os04g0681600|AK105243
         (711 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os04g0681600  Protein of unknown function DUF580 family protein  1355   0.0  
Os04g0681400  Protein of unknown function DUF580 family protein  1335   0.0  

>Os04g0681600 Protein of unknown function DUF580 family protein
          Length = 711

 Score = 1355 bits (3506), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 666/711 (93%), Positives = 666/711 (93%)

Query: 1   MGGPLGAIIGRHPAAAXXXXXXXXXXXXXXXXXXXIIRHNRRCRDXXXXXXXXXXWVAMI 60
           MGGPLGAIIGRHPAAA                   IIRHNRRCRD          WVAMI
Sbjct: 1   MGGPLGAIIGRHPAAAGGGGEDELGGGGGGGDGGGIIRHNRRCRDLAFLVLFAAFWVAMI 60

Query: 61  VNSSFGFNQGNPLRLTYELDYKGNICGSRHGDPDLHELDVRYWMNPNQVYQSGVKDNKIN 120
           VNSSFGFNQGNPLRLTYELDYKGNICGSRHGDPDLHELDVRYWMNPNQVYQSGVKDNKIN
Sbjct: 61  VNSSFGFNQGNPLRLTYELDYKGNICGSRHGDPDLHELDVRYWMNPNQVYQSGVKDNKIN 120

Query: 121 LADAKAICLMECPIPAADGLNFVCDYPEGDIRLSIDDWINRDYDYFEFLAPDMRNSSLQL 180
           LADAKAICLMECPIPAADGLNFVCDYPEGDIRLSIDDWINRDYDYFEFLAPDMRNSSLQL
Sbjct: 121 LADAKAICLMECPIPAADGLNFVCDYPEGDIRLSIDDWINRDYDYFEFLAPDMRNSSLQL 180

Query: 181 QGPCYPVIFPSVNVYWSCQFIARASNVSLKHWQQMGGINIDENILIDKTIHKAINSKSSV 240
           QGPCYPVIFPSVNVYWSCQFIARASNVSLKHWQQMGGINIDENILIDKTIHKAINSKSSV
Sbjct: 181 QGPCYPVIFPSVNVYWSCQFIARASNVSLKHWQQMGGINIDENILIDKTIHKAINSKSSV 240

Query: 241 LKRYVADIGKSWPVLIVCGGLLPLFLSVIWLLLIRYFVAAMPWITVVLFNALVISVTMFF 300
           LKRYVADIGKSWPVLIVCGGLLPLFLSVIWLLLIRYFVAAMPWITVVLFNALVISVTMFF
Sbjct: 241 LKRYVADIGKSWPVLIVCGGLLPLFLSVIWLLLIRYFVAAMPWITVVLFNALVISVTMFF 300

Query: 301 YIKAGWLGNDPLTVVIGESDPYVHITGREISHLHAATVVMTVVMXXXXXXXXXXXXXXXX 360
           YIKAGWLGNDPLTVVIGESDPYVHITGREISHLHAATVVMTVVM                
Sbjct: 301 YIKAGWLGNDPLTVVIGESDPYVHITGREISHLHAATVVMTVVMIIAFLSSIAIIRRILI 360

Query: 361 ATPVLKVAAKVIGEVQALIIFPVVPYFIFAIFYMFWFSATLHLFSSGQVLRNDCNTDCCS 420
           ATPVLKVAAKVIGEVQALIIFPVVPYFIFAIFYMFWFSATLHLFSSGQVLRNDCNTDCCS
Sbjct: 361 ATPVLKVAAKVIGEVQALIIFPVVPYFIFAIFYMFWFSATLHLFSSGQVLRNDCNTDCCS 420

Query: 421 YDLKLGKVNCDNCCGYSIHYTPHIGIAILFHLFGCYWATQFFIACSSTVIAGSVASYYWA 480
           YDLKLGKVNCDNCCGYSIHYTPHIGIAILFHLFGCYWATQFFIACSSTVIAGSVASYYWA
Sbjct: 421 YDLKLGKVNCDNCCGYSIHYTPHIGIAILFHLFGCYWATQFFIACSSTVIAGSVASYYWA 480

Query: 481 RGEISHDIPFVTVVSSLKRLLRYSLGSVAIGSLVVSAVEWVRFILECLRRKLKLFDSARE 540
           RGEISHDIPFVTVVSSLKRLLRYSLGSVAIGSLVVSAVEWVRFILECLRRKLKLFDSARE
Sbjct: 481 RGEISHDIPFVTVVSSLKRLLRYSLGSVAIGSLVVSAVEWVRFILECLRRKLKLFDSARE 540

Query: 541 SCFGKMTSSSSQCCLGCIDWTLKSVNRNAYIMIAITGKGFFKASVLATGLIMNNILRIGK 600
           SCFGKMTSSSSQCCLGCIDWTLKSVNRNAYIMIAITGKGFFKASVLATGLIMNNILRIGK
Sbjct: 541 SCFGKMTSSSSQCCLGCIDWTLKSVNRNAYIMIAITGKGFFKASVLATGLIMNNILRIGK 600

Query: 601 VNVIGDVILFLGKLCVSLFCALFAFLMLDTHKYKSAHNKISSPLVPVVVSWALGFIVAKL 660
           VNVIGDVILFLGKLCVSLFCALFAFLMLDTHKYKSAHNKISSPLVPVVVSWALGFIVAKL
Sbjct: 601 VNVIGDVILFLGKLCVSLFCALFAFLMLDTHKYKSAHNKISSPLVPVVVSWALGFIVAKL 660

Query: 661 FFQVVEMSIDTIILSFCQDSEEHQGNAQYAPPLLVETLDEQSELHRLTQGP 711
           FFQVVEMSIDTIILSFCQDSEEHQGNAQYAPPLLVETLDEQSELHRLTQGP
Sbjct: 661 FFQVVEMSIDTIILSFCQDSEEHQGNAQYAPPLLVETLDEQSELHRLTQGP 711



>Os04g0681400 Protein of unknown function DUF580 family protein
          Length = 711

 Score = 1335 bits (3456), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 653/711 (91%), Positives = 660/711 (92%)

Query: 1   MGGPLGAIIGRHPAAAXXXXXXXXXXXXXXXXXXXIIRHNRRCRDXXXXXXXXXXWVAMI 60
           MGGPLGAIIGRHPAAA                   IIRHNRRCRD          WVAMI
Sbjct: 1   MGGPLGAIIGRHPAAAGGGGGDELGGVGGGGGGDGIIRHNRRCRDLAFLVLFAAFWVAMI 60

Query: 61  VNSSFGFNQGNPLRLTYELDYKGNICGSRHGDPDLHELDVRYWMNPNQVYQSGVKDNKIN 120
           VNSSFGFNQGNPLRLTYELDYKGNICGSRHGDPDLHELDVRYWMNPNQVYQSGVKDNKIN
Sbjct: 61  VNSSFGFNQGNPLRLTYELDYKGNICGSRHGDPDLHELDVRYWMNPNQVYQSGVKDNKIN 120

Query: 121 LADAKAICLMECPIPAADGLNFVCDYPEGDIRLSIDDWINRDYDYFEFLAPDMRNSSLQL 180
           LADAKAICLMECP+PAADGLNFVCDYPEGDIRLS+DDWI+RDYDYFEFL PDMRNSSLQL
Sbjct: 121 LADAKAICLMECPMPAADGLNFVCDYPEGDIRLSVDDWIDRDYDYFEFLTPDMRNSSLQL 180

Query: 181 QGPCYPVIFPSVNVYWSCQFIARASNVSLKHWQQMGGINIDENILIDKTIHKAINSKSSV 240
           QGPCYPVIFPSVNVYWSCQFIARASNVSLKHWQQMGGINIDENILIDKTIHKAINSKSSV
Sbjct: 181 QGPCYPVIFPSVNVYWSCQFIARASNVSLKHWQQMGGINIDENILIDKTIHKAINSKSSV 240

Query: 241 LKRYVADIGKSWPVLIVCGGLLPLFLSVIWLLLIRYFVAAMPWITVVLFNALVISVTMFF 300
           LKRYVADIGKSWPVLIVCGGLLPLFLSVIWLLLIRYFV A PWITVV+FNALVISVTMFF
Sbjct: 241 LKRYVADIGKSWPVLIVCGGLLPLFLSVIWLLLIRYFVVATPWITVVVFNALVISVTMFF 300

Query: 301 YIKAGWLGNDPLTVVIGESDPYVHITGREISHLHAATVVMTVVMXXXXXXXXXXXXXXXX 360
           YIKAGWLGNDPLTVVIGESDPYVHITGREISHLHAATVVMTVVM                
Sbjct: 301 YIKAGWLGNDPLTVVIGESDPYVHITGREISHLHAATVVMTVVMIIAFLTSIAIIRRILI 360

Query: 361 ATPVLKVAAKVIGEVQALIIFPVVPYFIFAIFYMFWFSATLHLFSSGQVLRNDCNTDCCS 420
           ATPVLKVAAKVIGEVQALIIFPVVPYFI AIFYMFWFSATLHLFSSGQVLRNDCNTDCCS
Sbjct: 361 ATPVLKVAAKVIGEVQALIIFPVVPYFILAIFYMFWFSATLHLFSSGQVLRNDCNTDCCS 420

Query: 421 YDLKLGKVNCDNCCGYSIHYTPHIGIAILFHLFGCYWATQFFIACSSTVIAGSVASYYWA 480
           YDLKLGKVNCDNCCGYSIHYTPHIGIAILFHLFGCYWATQFFIACSSTVIAGSVASYYWA
Sbjct: 421 YDLKLGKVNCDNCCGYSIHYTPHIGIAILFHLFGCYWATQFFIACSSTVIAGSVASYYWA 480

Query: 481 RGEISHDIPFVTVVSSLKRLLRYSLGSVAIGSLVVSAVEWVRFILECLRRKLKLFDSARE 540
           RGEISHDIPFVTVVSS+KRLLRYSLGSVAIGSLVVSAVEWVRFILECLRRKLKL DSARE
Sbjct: 481 RGEISHDIPFVTVVSSMKRLLRYSLGSVAIGSLVVSAVEWVRFILECLRRKLKLVDSARE 540

Query: 541 SCFGKMTSSSSQCCLGCIDWTLKSVNRNAYIMIAITGKGFFKASVLATGLIMNNILRIGK 600
           SCFGKMTSSSSQCCLGCIDWTLKSVNRNAYIMIAITGKGFFKASVLATGLIMNNILRIGK
Sbjct: 541 SCFGKMTSSSSQCCLGCIDWTLKSVNRNAYIMIAITGKGFFKASVLATGLIMNNILRIGK 600

Query: 601 VNVIGDVILFLGKLCVSLFCALFAFLMLDTHKYKSAHNKISSPLVPVVVSWALGFIVAKL 660
           VNVIGDVILFLGKLCVSLFCALFAFLMLDTHKYKSAHNKISSPLVPVVVSWALGFIVAKL
Sbjct: 601 VNVIGDVILFLGKLCVSLFCALFAFLMLDTHKYKSAHNKISSPLVPVVVSWALGFIVAKL 660

Query: 661 FFQVVEMSIDTIILSFCQDSEEHQGNAQYAPPLLVETLDEQSELHRLTQGP 711
           FFQVVEMSIDTIILSFCQD+EEHQGNAQYAPPLL+ETLDEQSEL RLTQGP
Sbjct: 661 FFQVVEMSIDTIILSFCQDAEEHQGNAQYAPPLLMETLDEQSELQRLTQGP 711



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.327    0.141    0.452 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 22,060,696
Number of extensions: 844985
Number of successful extensions: 1940
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 1936
Number of HSP's successfully gapped: 2
Length of query: 711
Length of database: 17,035,801
Length adjustment: 108
Effective length of query: 603
Effective length of database: 11,396,689
Effective search space: 6872203467
Effective search space used: 6872203467
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 160 (66.2 bits)