BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0669600 Os04g0669600|AK110767
(235 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0669600 Phospholipase/Carboxylesterase family protein 481 e-136
Os04g0669500 Phospholipase/Carboxylesterase family protein 234 3e-62
Os04g0669700 Phospholipase/Carboxylesterase family protein 214 3e-56
Os01g0175000 Phospholipase/Carboxylesterase family protein 76 2e-14
Os01g0612500 Phospholipase/Carboxylesterase family protein 72 5e-13
>Os04g0669600 Phospholipase/Carboxylesterase family protein
Length = 235
Score = 481 bits (1237), Expect = e-136, Method: Compositional matrix adjust.
Identities = 235/235 (100%), Positives = 235/235 (100%)
Query: 1 MGMAAAGGYGRVLWLHGSGQTGEESRAQVAPYFAAPELASVRFSFPTAPTSSIPCYGGEV 60
MGMAAAGGYGRVLWLHGSGQTGEESRAQVAPYFAAPELASVRFSFPTAPTSSIPCYGGEV
Sbjct: 1 MGMAAAGGYGRVLWLHGSGQTGEESRAQVAPYFAAPELASVRFSFPTAPTSSIPCYGGEV 60
Query: 61 ITAWFAIPEVPITARTARDEKEVLKAVERVHEMLDGEVAAGTSPSNIFVCGLSQGGALAI 120
ITAWFAIPEVPITARTARDEKEVLKAVERVHEMLDGEVAAGTSPSNIFVCGLSQGGALAI
Sbjct: 61 ITAWFAIPEVPITARTARDEKEVLKAVERVHEMLDGEVAAGTSPSNIFVCGLSQGGALAI 120
Query: 121 ASVLLYPMTLGGCVVFSGSLPLSKTFAESIPSEARKTPVLWFHGMADGVVLFEAGHAGCA 180
ASVLLYPMTLGGCVVFSGSLPLSKTFAESIPSEARKTPVLWFHGMADGVVLFEAGHAGCA
Sbjct: 121 ASVLLYPMTLGGCVVFSGSLPLSKTFAESIPSEARKTPVLWFHGMADGVVLFEAGHAGCA 180
Query: 181 FLQEIGMHCEFKAYPALGHTLVDEELQYFRQWIKDRLSQGTGVPVPSLSDKMDLQ 235
FLQEIGMHCEFKAYPALGHTLVDEELQYFRQWIKDRLSQGTGVPVPSLSDKMDLQ
Sbjct: 181 FLQEIGMHCEFKAYPALGHTLVDEELQYFRQWIKDRLSQGTGVPVPSLSDKMDLQ 235
>Os04g0669500 Phospholipase/Carboxylesterase family protein
Length = 266
Score = 234 bits (598), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 114/206 (55%), Positives = 141/206 (68%), Gaps = 1/206 (0%)
Query: 12 VLWLHGSGQTGEESRAQVAPYFAAPELASVRFSFPTAPTSSIPCYGGEVITAWFAIPEVP 71
VLWLHG G +G + + +F+APE +++FP+AP S + C G V+ +WF I E+P
Sbjct: 54 VLWLHGLGDSGPANEP-IRNFFSAPEFRLTKWAFPSAPNSPVSCNHGAVMPSWFDIHELP 112
Query: 72 ITARTARDEKEVLKAVERVHEMLDGEVAAGTSPSNIFVCGLSQGGALAIASVLLYPMTLG 131
+++ + +D+ VLKAVE VH M+D EVA G P NIFVCG SQGGAL +ASVLLYP TLG
Sbjct: 113 MSSGSPQDDSGVLKAVENVHAMIDKEVADGIPPENIFVCGFSQGGALTLASVLLYPKTLG 172
Query: 132 GCVVFSGSLPLSKTFAESIPSEARKTPVLWFHGMADGVVLFEAGHAGCAFLQEIGMHCEF 191
G VFSG LP + E I EARKTP+LW HG+AD VVLFEAG AG FLQ G CEF
Sbjct: 173 GGAVFSGWLPFGSSVTERISPEARKTPILWSHGIADNVVLFEAGQAGPPFLQNAGFSCEF 232
Query: 192 KAYPALGHTLVDEELQYFRQWIKDRL 217
KAYP LGH++ EEL WIK+ L
Sbjct: 233 KAYPGLGHSISKEELYSLESWIKNHL 258
>Os04g0669700 Phospholipase/Carboxylesterase family protein
Length = 245
Score = 214 bits (546), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 101/208 (48%), Positives = 141/208 (67%)
Query: 12 VLWLHGSGQTGEESRAQVAPYFAAPELASVRFSFPTAPTSSIPCYGGEVITAWFAIPEVP 71
V+WLHG G TG + + A R++FPTAPT+ + C G ++ +WF I + P
Sbjct: 14 VVWLHGLGDTGRANEFLADSFPTTAAFADARWAFPTAPTAPVTCNRGMLMPSWFDIHDAP 73
Query: 72 ITARTARDEKEVLKAVERVHEMLDGEVAAGTSPSNIFVCGLSQGGALAIASVLLYPMTLG 131
IT+ + RDE++VL+AV+ VH M+D E+AAGT+P ++FV GLSQGGAL IASVLL+P TLG
Sbjct: 74 ITSVSVRDEEDVLRAVQSVHAMIDREIAAGTNPQDVFVFGLSQGGALGIASVLLHPKTLG 133
Query: 132 GCVVFSGSLPLSKTFAESIPSEARKTPVLWFHGMADGVVLFEAGHAGCAFLQEIGMHCEF 191
GC VFSG LP + +FA + ++A+KTPVLW HG A ++ + G G FL+ +GM CEF
Sbjct: 134 GCAVFSGFLPFNSSFAVRVTAQAKKTPVLWIHGQAGSLIPIKEGRDGIKFLRGLGMSCEF 193
Query: 192 KAYPALGHTLVDEELQYFRQWIKDRLSQ 219
K Y LGH+L EL Y ++W++ L +
Sbjct: 194 KVYDRLGHSLEYYELDYCQRWVEKILHR 221
>Os01g0175000 Phospholipase/Carboxylesterase family protein
Length = 301
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 98/217 (45%), Gaps = 34/217 (15%)
Query: 12 VLWLHGSGQTGEESRAQVAPYFAAPELASVRFSFPTAPTSSIPCYGGEVITAWFAIPEVP 71
++WLHG G G A + L ++++ PTAPT + +GG TAWF + ++
Sbjct: 97 IVWLHGLGDNG----ASWSQLLETLPLPNIKWICPTAPTRPVAVFGGFPSTAWFDVADL- 151
Query: 72 ITARTARDEKEVLKA-VERVHEMLDGEVAAGTSPSNIF--VCGLSQGGALAIASVLL--- 125
+ A D+ E L A V +L T P++I V G S G A A+ S
Sbjct: 152 --SEDAPDDVEGLDASAAHVANLLS------TEPADIKLGVGGFSMGAATALYSATCYAH 203
Query: 126 --------YPMTLGGCVVFSGSLPLSKTFAESIPS------EARKTPVLWFHGMADGVVL 171
YP+ L V SG LP +++ I S +A P+L HG AD VVL
Sbjct: 204 GKYGNGNPYPVNLSVSVGLSGWLPCARSLKNKIESSQEAAQKASSIPLLLCHGKADDVVL 263
Query: 172 FEAGHAGCAFLQEIGM-HCEFKAYPALGHTLVDEELQ 207
++ G L+ G + FK+Y LGH V +++
Sbjct: 264 YKHGEKSADALKTTGFSNVVFKSYNRLGHYTVPNKIE 300
>Os01g0612500 Phospholipase/Carboxylesterase family protein
Length = 243
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 93/212 (43%), Gaps = 34/212 (16%)
Query: 12 VLWLHGSGQTGEESRAQVAPYFAAPELASVRFSFPTAPTSSIPCYGGEVITAWFAIPEVP 71
++WLHG G G A + + L ++++ PTAPT + +GG TAWF +V
Sbjct: 34 IVWLHGLGDNG----ASWSQLLDSLPLPNIKWICPTAPTRPVAAFGGFPCTAWF---DVE 86
Query: 72 ITARTARDEKEVLKA-VERVHEMLDGEVAAGTSPSNIF--VCGLSQGGALA--------- 119
T+ RD+ E L A V +L E PS++ + G S G A A
Sbjct: 87 DTSVDGRDDIEGLDASAAHVANLLSSE------PSDVKLGIGGFSMGAAAALHSAACYAH 140
Query: 120 --IASVLLYPMTLGGCVVFSGSLPLSKTFAESIPS------EARKTPVLWFHGMADGVVL 171
+ + YP+TL + SG LP S+T + S A P+L HG AD VV
Sbjct: 141 GRFTNGVAYPVTLSAVIGLSGWLPCSRTLKSKMDSSQTALRRAGALPILLSHGRADEVVT 200
Query: 172 FEAGHAGCAFLQEIGM-HCEFKAYPALGHTLV 202
+ G FL+ G + FK Y HT +
Sbjct: 201 YRNGEKSADFLRGSGFQYLNFKPYNGYRHTYL 232
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.136 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,918,832
Number of extensions: 379798
Number of successful extensions: 948
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 941
Number of HSP's successfully gapped: 5
Length of query: 235
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 137
Effective length of database: 11,918,829
Effective search space: 1632879573
Effective search space used: 1632879573
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 154 (63.9 bits)