Os04g0669500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Phospholipase/Carboxylesterase family protein.
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Os04g0669500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Phospholipase/Carboxylesterase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.3 | 0.217 | 11.8 | -0.062 | 0.377 | -0.761 | -0.101 | -0.404 | 0.0455 | 22.6 | 19.6 | 1668 | -- | -- |
| 21.52 | 0.216 | 11.8 | -0.103 | 0.382 | -0.666 | -0.0943 | -- | 0.0362 | 22.6 | 19.7 | 1714 | -- | -- |
| 21.34 | 0.215 | 11.8 | -0.0571 | 0.377 | -0.758 | -- | -0.405 | 0.0459 | 22.6 | 19.57 | 1664 | -- | -- |
| 21.55 | 0.216 | 11.8 | -0.107 | 0.378 | -0.67 | -- | -- | 0.0347 | 22.6 | 19.7 | 1714 | -- | -- |
| 29.51 | 0.253 | 11.8 | -0.0956 | -- | -0.728 | -- | -0.338 | 0.0358 | -- | 19.5 | 2138 | -- | -- |
| 28.97 | 0.252 | 11.8 | 0.154 | 0.38 | -- | -0.0271 | -- | 0.16 | 22.6 | -- | -- | -- | -- |
| 28.97 | 0.252 | 11.8 | 0.155 | 0.38 | -- | -- | -- | 0.16 | 22.6 | -- | -- | -- | -- |
| 29.69 | 0.254 | 11.8 | -0.147 | -- | -0.669 | -- | -- | 0.0228 | -- | 19.5 | 2135 | -- | -- |
| 21.8 | 0.217 | 11.8 | -- | 0.378 | -0.616 | -- | -- | 0.0538 | 22.6 | 19.6 | 1710 | -- | -- |
| 37.87 | 0.288 | 11.8 | 0.162 | -- | -- | -- | -- | 0.162 | -- | -- | -- | -- | -- |
| 29.61 | 0.255 | 11.8 | -- | 0.381 | -- | -- | -- | 0.142 | 22.6 | -- | -- | -- | -- |
| 30.1 | 0.256 | 11.8 | -- | -- | -0.585 | -- | -- | 0.0485 | -- | 19.65 | 2048 | -- | -- |
| 38.57 | 0.29 | 11.8 | -- | -- | -- | -- | -- | 0.144 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.99 | wind | 3 | 43200 | < th | dose dependent | rect. | 23 | 3 |
| 2 | 21.04 | wind | 3 | 14400 | < th | dose independent | rect. | 23 | 17 |
| 3 | 21.05 | wind | 3 | 14400 | > th | dose independent | rect. | 23 | 17 |
| 31 | 21.19 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 42 | 21.24 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 49 | 21.27 | wind | 3 | 14400 | < th | dose dependent | rect. | 21 | 19 |
| 50 | 21.28 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 68 | 21.32 | wind | 3 | 14400 | < th | dose independent | sin | 4 | NA |
| 74 | 21.33 | wind | 3 | 14400 | > th | dose independent | sin | 4 | NA |
| 78 | 21.33 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 16 |
| 87 | 21.35 | temperature | 20 | 1440 | < th | dose independent | sin | 3 | NA |
| 88 | 21.35 | wind | 1 | 14400 | > th | dose independent | rect. | 23 | 3 |
| 100 | 21.36 | temperature | 20 | 1440 | > th | dose independent | sin | 3 | NA |
| 106 | 21.37 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 12 |
| 107 | 21.37 | temperature | 20 | 1440 | > th | dose independent | rect. | 2 | 16 |
| 108 | 21.37 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 21 |
| 131 | 21.39 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 20 |
| 143 | 21.40 | wind | 3 | 14400 | > th | dose independent | rect. | 16 | 15 |
| 165 | 21.42 | wind | 3 | 14400 | > th | dose independent | rect. | 15 | 17 |
| 177 | 21.43 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 12 |
| 181 | 21.43 | wind | 3 | 14400 | < th | dose independent | rect. | 15 | 16 |
| 187 | 21.43 | wind | 3 | 14400 | < th | dose dependent | rect. | 10 | 22 |
| 189 | 21.44 | wind | 1 | 14400 | < th | dose independent | rect. | 23 | 3 |
| 201 | 21.44 | wind | 3 | 14400 | < th | dose independent | rect. | 11 | 21 |
| 241 | 21.48 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 254 | 21.48 | wind | 3 | 14400 | < th | dose dependent | rect. | 11 | 2 |
| 276 | 21.49 | wind | 3 | 14400 | < th | dose dependent | rect. | 18 | 13 |
| 279 | 21.50 | wind | 3 | 14400 | > th | dose independent | sin | 12 | NA |
| 282 | 21.50 | wind | 1 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 327 | 21.52 | wind | 3 | 14400 | > th | dose independent | rect. | 11 | 21 |
| 330 | 21.52 | wind | 3 | 14400 | < th | dose dependent | sin | 12 | NA |
| 333 | 21.53 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 6 |
| 395 | 21.56 | wind | 3 | 14400 | < th | dose independent | sin | 12 | NA |
| 436 | 21.58 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 3 |
| 453 | 21.59 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 6 |
| 483 | 21.60 | wind | 3 | 14400 | < th | dose dependent | no | NA | NA |
| 488 | 21.60 | wind | 3 | 14400 | < th | dose dependent | rect. | 15 | 17 |
| 506 | 21.61 | wind | 3 | 14400 | < th | dose dependent | sin | 4 | NA |
| 558 | 21.63 | wind | 3 | 14400 | < th | dose dependent | rect. | 3 | 23 |
| 559 | 21.64 | wind | 3 | 14400 | < th | dose independent | no | NA | NA |
| 574 | 21.64 | temperature | 20 | 1440 | < th | dose independent | rect. | 2 | 22 |
| 604 | 21.66 | temperature | 20 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 662 | 21.69 | wind | 1 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 699 | 21.70 | temperature | 20 | 1440 | > th | dose independent | rect. | 2 | 22 |
| 712 | 21.71 | wind | 3 | 14400 | > th | dose independent | no | NA | NA |
| 737 | 21.71 | wind | 3 | 14400 | < th | dose dependent | rect. | 1 | 23 |
| 777 | 21.73 | wind | 1 | 14400 | > th | dose dependent | rect. | 22 | 17 |
| 794 | 21.74 | humidity | 50 | 43200 | > th | dose dependent | rect. | 4 | 2 |
| 820 | 21.75 | wind | 3 | 14400 | < th | dose independent | rect. | 1 | 23 |
| 822 | 21.75 | temperature | 20 | 1440 | < th | dose independent | rect. | 9 | 23 |
| 837 | 21.76 | humidity | 90 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 855 | 21.76 | humidity | 50 | 43200 | > th | dose dependent | rect. | 2 | 4 |
| 865 | 21.77 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 872 | 21.77 | temperature | 20 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 874 | 21.77 | temperature | 20 | 1440 | < th | dose independent | rect. | 15 | 23 |
| 893 | 21.78 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 899 | 21.78 | wind | 3 | 14400 | < th | dose independent | rect. | 5 | 23 |
| 901 | 21.78 | wind | 9 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 931 | 21.79 | temperature | 20 | 1440 | > th | dose independent | rect. | 15 | 23 |