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Os01g0175000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Phospholipase/Carboxylesterase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.8 (0.0115) R2 : 0.0874
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.16 (0.0242) R2dN8 : 0.113 R2N8 : 0.0874
σ : 0.217
deviance : 21.53
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
11.09 0.156 13.8 -0.117 0.231 -0.109 0.0785 3.02 -0.168 2.66 28.89 843 -- --
11.63 0.159 13.9 -0.513 0.218 0.169 0.0532 -- -0.218 2.24 27.02 1333 -- --
11.11 0.155 13.8 -0.111 0.229 -0.111 -- 3 -0.166 2.58 28.82 854 -- --
11.52 0.158 13.9 -0.52 0.228 0.171 -- -- -0.22 2.04 27.5 5755 -- --
13.98 0.174 13.8 -0.102 -- -0.0408 -- 2.46 -0.148 -- 28.32 977 -- --
12.85 0.168 13.9 -0.454 0.237 -- 0.1 -- -0.215 2.04 -- -- -- --
12.89 0.168 13.9 -0.457 0.237 -- -- -- -0.215 2.06 -- -- -- --
14.59 0.178 13.9 -0.521 -- 0.179 -- -- -0.256 -- 25.92 6966 -- --
17.76 0.196 13.8 -- 0.25 0.0862 -- -- -0.181 2.52 33.64 7080 -- --
16.27 0.188 13.9 -0.447 -- -- -- -- -0.21 -- -- -- -- --
18.39 0.201 13.8 -- 0.229 -- -- -- -0.164 2.01 -- -- -- --
18.1 0.198 13.8 -- -- -0.243 -- -- -0.183 -- 35.1 47520 -- --
21.53 0.217 13.8 -- -- -- -- -- -0.16 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 10.74 humidity 70 43200 > th dose dependent rect. 1 13
2 10.75 humidity 70 43200 > th dose dependent rect. 17 22
4 10.76 humidity 70 43200 > th dose dependent rect. 2 11
7 10.77 humidity 70 43200 > th dose dependent rect. 7 22
9 10.77 humidity 70 43200 > th dose dependent rect. 15 23
11 10.78 humidity 70 43200 > th dose dependent sin 4 NA
12 10.78 humidity 70 43200 > th dose dependent no NA NA
25 10.78 humidity 70 43200 > th dose dependent rect. 20 23
28 10.79 humidity 70 43200 > th dose dependent rect. 1 23
29 10.79 humidity 70 43200 > th dose dependent rect. 10 23
104 10.87 humidity 70 43200 > th dose dependent sin 16 NA
118 10.89 temperature 30 720 > th dose independent rect. 17 21
130 10.91 humidity 80 43200 > th dose independent rect. 3 12
131 10.91 humidity 80 43200 < th dose independent rect. 1 15
138 10.92 humidity 80 43200 < th dose independent rect. 2 13
151 10.94 humidity 80 43200 > th dose independent sin 3 NA
170 10.96 humidity 80 43200 < th dose independent sin 3 NA
171 10.96 wind 1 43200 > th dose independent rect. 16 5
179 10.97 humidity 80 43200 > th dose independent rect. 24 21
186 10.98 humidity 80 43200 < th dose independent rect. 23 21
188 10.98 humidity 80 43200 > th dose dependent rect. 20 13
209 11.01 humidity 80 43200 > th dose dependent rect. 21 3
210 11.01 humidity 80 43200 > th dose dependent rect. 20 5
226 11.03 wind 1 43200 < th dose independent rect. 16 5
229 11.03 humidity 80 43200 > th dose independent rect. 24 18
238 11.04 humidity 80 43200 > th dose dependent rect. 19 10
245 11.05 humidity 80 43200 > th dose dependent sin 10 NA
266 11.06 humidity 80 43200 > th dose dependent rect. 22 1
274 11.07 temperature 30 720 > th dose independent sin 10 NA
276 11.07 wind 1 43200 > th dose independent rect. 13 10
278 11.07 humidity 80 43200 > th dose independent rect. 8 19
318 11.10 temperature 30 720 > th dose independent rect. 8 6
336 11.10 humidity 80 43200 < th dose independent rect. 8 19
344 11.11 wind 1 43200 > th dose independent rect. 17 1
350 11.11 humidity 80 43200 > th dose dependent rect. 2 7
365 11.12 wind 9 43200 > th dose independent rect. 19 15
374 11.12 temperature 30 720 < th dose independent rect. 6 23
376 11.12 wind 1 43200 < th dose dependent rect. 13 8
387 11.13 wind 9 43200 < th dose independent rect. 19 15
406 11.13 temperature 30 720 > th dose dependent rect. 16 21
414 11.14 temperature 30 720 < th dose independent rect. 24 23
427 11.15 wind 1 43200 < th dose independent rect. 17 1
432 11.15 temperature 30 720 < th dose independent rect. 1 17
435 11.15 humidity 80 43200 > th dose independent rect. 5 20
437 11.15 humidity 80 43200 > th dose independent rect. 3 21
452 11.16 humidity 80 43200 > th dose independent rect. 11 15
454 11.16 wind 9 43200 < th dose independent rect. 18 17
461 11.16 temperature 30 720 > th dose dependent sin 10 NA
495 11.18 humidity 80 43200 < th dose independent rect. 11 15
511 11.19 temperature 30 720 < th dose independent sin 3 NA
524 11.19 wind 9 43200 > th dose dependent rect. 19 13
530 11.20 temperature 30 720 > th dose independent rect. 11 3
532 11.20 humidity 90 43200 < th dose independent rect. 2 5
539 11.20 temperature 30 720 < th dose independent rect. 24 19
599 11.23 humidity 80 43200 < th dose independent rect. 5 20
605 11.23 temperature 30 720 < th dose independent rect. 3 23
608 11.23 wind 3 43200 < th dose dependent rect. 17 1
609 11.23 temperature 20 43200 < th dose dependent rect. 21 1
610 11.23 temperature 20 43200 < th dose dependent rect. 8 2
611 11.23 temperature 20 43200 < th dose dependent rect. 17 5
617 11.24 temperature 30 720 > th dose independent no NA NA
619 11.24 temperature 20 43200 < th dose independent rect. 12 1
620 11.24 wind 7 43200 > th dose independent rect. 5 4
622 11.24 temperature 30 720 > th dose independent rect. 8 11
691 11.24 humidity 80 43200 < th dose independent rect. 3 21
731 11.24 temperature 20 43200 < th dose dependent rect. 8 14
754 11.25 atmosphere 1000 30 > th dose independent rect. 9 23
755 11.25 wind 3 14400 < th dose dependent rect. 15 1
775 11.26 temperature 30 720 > th dose independent sin 3 NA
778 11.26 temperature 20 43200 > th dose independent rect. 12 1
779 11.26 humidity 90 43200 > th dose independent rect. 4 1
803 11.26 temperature 30 720 > th dose independent rect. 11 23
804 11.26 temperature 30 720 > th dose dependent no NA NA
808 11.26 temperature 20 43200 < th dose dependent rect. 12 1
818 11.26 temperature 30 720 > th dose dependent rect. 9 10
928 11.26 temperature 30 720 > th dose dependent rect. 11 23
934 11.27 wind 9 43200 > th dose independent sin 10 NA
935 11.27 temperature 30 720 > th dose independent sin 1 NA
937 11.27 temperature 30 720 < th dose independent no NA NA
949 11.27 temperature 30 720 < th dose independent rect. 14 22
955 11.27 temperature 30 720 > th dose dependent sin 22 NA
958 11.27 temperature 20 43200 < th dose dependent rect. 18 1
965 11.27 temperature 20 43200 < th dose dependent rect. 7 7
978 11.27 wind 7 43200 > th dose dependent rect. 19 15