BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os04g0502900 Os04g0502900|AK059306
         (472 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os04g0502900  EF-Hand type domain containing protein              806   0.0  
Os02g0613000  EF-Hand type domain containing protein              626   e-180

>Os04g0502900 EF-Hand type domain containing protein
          Length = 472

 Score =  806 bits (2083), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/407 (97%), Positives = 395/407 (97%)

Query: 66  ADSGEAVADAPAVQIXXXXXXXXXXXXEERGRKRRFLLGDSFRRRVFFNYEKRIRLLSPP 125
           ADSGEAVADAPAVQI            EERGRKRRFLLGDSFRRRVFFNYEKRIRLLSPP
Sbjct: 66  ADSGEAVADAPAVQISVGSGSGAVGAVEERGRKRRFLLGDSFRRRVFFNYEKRIRLLSPP 125

Query: 126 EKIFEYFASVRNPEGEVFMLPADLMRAVVPVFPPSESNIVREGRLRGERNPGELHCAPSE 185
           EKIFEYFASVRNPEGEVFMLPADLMRAVVPVFPPSESNIVREGRLRGERNPGELHCAPSE
Sbjct: 126 EKIFEYFASVRNPEGEVFMLPADLMRAVVPVFPPSESNIVREGRLRGERNPGELHCAPSE 185

Query: 186 FFMLFDTNGDRLISFAEYIFFVTLLSIPESSFSAAFKMFDVDHSGEIDKEEFKKVMALMR 245
           FFMLFDTNGDRLISFAEYIFFVTLLSIPESSFSAAFKMFDVDHSGEIDKEEFKKVMALMR
Sbjct: 186 FFMLFDTNGDRLISFAEYIFFVTLLSIPESSFSAAFKMFDVDHSGEIDKEEFKKVMALMR 245

Query: 246 SYNRQGANHRDGLRTGLKVGQPVENGGVVEYFFGNDGNEPLHYDKFTNFLKGLHDEIIRL 305
           SYNRQGANHRDGLRTGLKVGQPVENGGVVEYFFGNDGNEPLHYDKFTNFLKGLHDEIIRL
Sbjct: 246 SYNRQGANHRDGLRTGLKVGQPVENGGVVEYFFGNDGNEPLHYDKFTNFLKGLHDEIIRL 305

Query: 306 EFSHYDVKSSNTIPAKDFALSMVASADMNHINKLLDRVDNLGNDPDLKGVRITFEEFKSF 365
           EFSHYDVKSSNTIPAKDFALSMVASADMNHINKLLDRVDNLGNDPDLKGVRITFEEFKSF
Sbjct: 306 EFSHYDVKSSNTIPAKDFALSMVASADMNHINKLLDRVDNLGNDPDLKGVRITFEEFKSF 365

Query: 366 ADLRRRLEPLAMAIFTYGKVNGLLTKQDLKRAAHHVCGVDLTDRVVDIIFHVFDTNHDGN 425
           ADLRRRLEPLAMAIFTYGKVNGLLTKQDLKRAAHHVCGVDLTDRVVDIIFHVFDTNHDGN
Sbjct: 366 ADLRRRLEPLAMAIFTYGKVNGLLTKQDLKRAAHHVCGVDLTDRVVDIIFHVFDTNHDGN 425

Query: 426 LSSEEFVRALQRRETDVRQPATPGSMGLLSYWLNFNKCSSLTQMLLK 472
           LSSEEFVRALQRRETDVRQPATPGSMGLLSYWLNFNKCSSLTQMLLK
Sbjct: 426 LSSEEFVRALQRRETDVRQPATPGSMGLLSYWLNFNKCSSLTQMLLK 472



>Os02g0613000 EF-Hand type domain containing protein
          Length = 478

 Score =  626 bits (1615), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 304/364 (83%), Positives = 330/364 (90%)

Query: 101 FLLGDSFRRRVFFNYEKRIRLLSPPEKIFEYFASVRNPEGEVFMLPADLMRAVVPVFPPS 160
           FL GDS+RRRVFFNYEKRIR  SPPEKIFEYFAS+RNPEGEV+MLPADLMRAVVPVFPPS
Sbjct: 109 FLFGDSYRRRVFFNYEKRIRTRSPPEKIFEYFASIRNPEGEVYMLPADLMRAVVPVFPPS 168

Query: 161 ESNIVREGRLRGERNPGELHCAPSEFFMLFDTNGDRLISFAEYIFFVTLLSIPESSFSAA 220
           ES IVREG LRGERNPGELHCAPSEFFMLFDTNGD LISFAEYIFFVTLLSIPESSF+ A
Sbjct: 169 ESKIVREGSLRGERNPGELHCAPSEFFMLFDTNGDGLISFAEYIFFVTLLSIPESSFNIA 228

Query: 221 FKMFDVDHSGEIDKEEFKKVMALMRSYNRQGANHRDGLRTGLKVGQPVENGGVVEYFFGN 280
           FKMFD+DHSGEIDKEEFKKVMALMRSY+RQGA HRDGLR GLKVGQ VENGG+VEYFFG 
Sbjct: 229 FKMFDLDHSGEIDKEEFKKVMALMRSYHRQGAAHRDGLRFGLKVGQSVENGGLVEYFFGK 288

Query: 281 DGNEPLHYDKFTNFLKGLHDEIIRLEFSHYDVKSSNTIPAKDFALSMVASADMNHINKLL 340
           DGNE L YDKF+NFLK LHDEI+RLEFSHYDVKSS TI  KDFALSMVASADMNHINKLL
Sbjct: 289 DGNEQLRYDKFSNFLKQLHDEIVRLEFSHYDVKSSKTISVKDFALSMVASADMNHINKLL 348

Query: 341 DRVDNLGNDPDLKGVRITFEEFKSFADLRRRLEPLAMAIFTYGKVNGLLTKQDLKRAAHH 400
           DRVD+  + PDLK +RITFEEFK+FADLRR+LEP AMAIF+YGKVNGLLTKQDLKRAA H
Sbjct: 349 DRVDDFDDYPDLKDLRITFEEFKAFADLRRKLEPFAMAIFSYGKVNGLLTKQDLKRAATH 408

Query: 401 VCGVDLTDRVVDIIFHVFDTNHDGNLSSEEFVRALQRRETDVRQPATPGSMGLLSYWLNF 460
           VC VDLTD+VVD+IF VFD N DG+LS++EF+RALQRRE+D+RQPA+ G MG+ +  LN 
Sbjct: 409 VCEVDLTDKVVDVIFLVFDANRDGSLSADEFLRALQRRESDIRQPASSGLMGVFTCLLNC 468

Query: 461 NKCS 464
            KCS
Sbjct: 469 TKCS 472



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.323    0.140    0.411 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,572,780
Number of extensions: 585867
Number of successful extensions: 1523
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 1516
Number of HSP's successfully gapped: 2
Length of query: 472
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 367
Effective length of database: 11,553,331
Effective search space: 4240072477
Effective search space used: 4240072477
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 158 (65.5 bits)