BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0837300 Os03g0837300|AK121140
         (560 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os03g0837300  Nicotinate phosphoribosyltransferase and relat...  1128   0.0  
Os04g0429800  Nicotinate phosphoribosyltransferase and relat...   527   e-150
Os12g0494100                                                       76   6e-14

>Os03g0837300 Nicotinate phosphoribosyltransferase and related family protein
          Length = 560

 Score = 1128 bits (2917), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 543/543 (100%), Positives = 543/543 (100%)

Query: 18  VPRPTNPMVTPLLTDLYQFTMAYAYWKAGKHLDRAVFDLYFRKNPFGGEFTIFGGLEECI 77
           VPRPTNPMVTPLLTDLYQFTMAYAYWKAGKHLDRAVFDLYFRKNPFGGEFTIFGGLEECI
Sbjct: 18  VPRPTNPMVTPLLTDLYQFTMAYAYWKAGKHLDRAVFDLYFRKNPFGGEFTIFGGLEECI 77

Query: 78  RFIANFKLTDTEITFLRSAMPTCEDGFFEYLSSIDCSDVEVYAIPEGSVVFPKVPLMIIE 137
           RFIANFKLTDTEITFLRSAMPTCEDGFFEYLSSIDCSDVEVYAIPEGSVVFPKVPLMIIE
Sbjct: 78  RFIANFKLTDTEITFLRSAMPTCEDGFFEYLSSIDCSDVEVYAIPEGSVVFPKVPLMIIE 137

Query: 138 GPVAVIQLLETPFLSLVNYASLVTTNAARHRLVAGKSKNLLEFGLRRAQGPDGGISASRY 197
           GPVAVIQLLETPFLSLVNYASLVTTNAARHRLVAGKSKNLLEFGLRRAQGPDGGISASRY
Sbjct: 138 GPVAVIQLLETPFLSLVNYASLVTTNAARHRLVAGKSKNLLEFGLRRAQGPDGGISASRY 197

Query: 198 CYMGGFDATSNVAAGWLFGIPIRGTHSHAFVSSFMGLDDIIDRTLASSDGSNKCEDFVSL 257
           CYMGGFDATSNVAAGWLFGIPIRGTHSHAFVSSFMGLDDIIDRTLASSDGSNKCEDFVSL
Sbjct: 198 CYMGGFDATSNVAAGWLFGIPIRGTHSHAFVSSFMGLDDIIDRTLASSDGSNKCEDFVSL 257

Query: 258 VQNWLARIKDAGSLRGTFRETNLSELAAFTSYALAFPNSFLALVDTYDVMRSGVPNFCAV 317
           VQNWLARIKDAGSLRGTFRETNLSELAAFTSYALAFPNSFLALVDTYDVMRSGVPNFCAV
Sbjct: 258 VQNWLARIKDAGSLRGTFRETNLSELAAFTSYALAFPNSFLALVDTYDVMRSGVPNFCAV 317

Query: 318 ALALNDMGYKAAGIRLDSGDLAYLSVETRKFFRAIEEEFGFIGFGKMNITASNDLNEETI 377
           ALALNDMGYKAAGIRLDSGDLAYLSVETRKFFRAIEEEFGFIGFGKMNITASNDLNEETI
Sbjct: 318 ALALNDMGYKAAGIRLDSGDLAYLSVETRKFFRAIEEEFGFIGFGKMNITASNDLNEETI 377

Query: 378 DALNKQGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVTKVSIPCKKRC 437
           DALNKQGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVTKVSIPCKKRC
Sbjct: 378 DALNKQGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVTKVSIPCKKRC 437

Query: 438 YRLFGKEGYPLVDIMTGEDEPAPKVGERLLCRHPFNESKRAYVVPQHVEELLKCYWPGTT 497
           YRLFGKEGYPLVDIMTGEDEPAPKVGERLLCRHPFNESKRAYVVPQHVEELLKCYWPGTT
Sbjct: 438 YRLFGKEGYPLVDIMTGEDEPAPKVGERLLCRHPFNESKRAYVVPQHVEELLKCYWPGTT 497

Query: 498 SEPREELPSINEIRSRCMGYLDRMRPDHMRRLNPTPYKVSVSAKLYDFIHFLWLNEAPVG 557
           SEPREELPSINEIRSRCMGYLDRMRPDHMRRLNPTPYKVSVSAKLYDFIHFLWLNEAPVG
Sbjct: 498 SEPREELPSINEIRSRCMGYLDRMRPDHMRRLNPTPYKVSVSAKLYDFIHFLWLNEAPVG 557

Query: 558 ELQ 560
           ELQ
Sbjct: 558 ELQ 560



>Os04g0429800 Nicotinate phosphoribosyltransferase and related family protein
          Length = 312

 Score =  527 bits (1358), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 247/310 (79%), Positives = 276/310 (89%)

Query: 251 CEDFVSLVQNWLARIKDAGSLRGTFRETNLSELAAFTSYALAFPNSFLALVDTYDVMRSG 310
           C++FVSL + WL +I+ A SL G F ETN SELAAF SYAL FP  FLALVDTYDVMRSG
Sbjct: 3   CKNFVSLEKEWLKKIQLAESLCGVFGETNQSELAAFASYALGFPTHFLALVDTYDVMRSG 62

Query: 311 VPNFCAVALALNDMGYKAAGIRLDSGDLAYLSVETRKFFRAIEEEFGFIGFGKMNITASN 370
           +PNFCAVALAL+D+GYKA+GIRLDSGDLAYLS+E RK FR +E+EF    FGKM ITASN
Sbjct: 63  IPNFCAVALALHDLGYKASGIRLDSGDLAYLSIEARKVFRTLEKEFNVPAFGKMIITASN 122

Query: 371 DLNEETIDALNKQGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVTKVS 430
           DLNEETIDALNKQGHEVD+FGIGTYLVTCY+QAALGCVFKLVEIN +PRIKLSEDV KVS
Sbjct: 123 DLNEETIDALNKQGHEVDSFGIGTYLVTCYSQAALGCVFKLVEINSRPRIKLSEDVAKVS 182

Query: 431 IPCKKRCYRLFGKEGYPLVDIMTGEDEPAPKVGERLLCRHPFNESKRAYVVPQHVEELLK 490
           IPCKKRC+RL+GKEGYPLVDIM  E EP+PK GER+LCRHPF ESKRAYVVPQHVEELL+
Sbjct: 183 IPCKKRCFRLYGKEGYPLVDIMMRESEPSPKAGERILCRHPFLESKRAYVVPQHVEELLQ 242

Query: 491 CYWPGTTSEPREELPSINEIRSRCMGYLDRMRPDHMRRLNPTPYKVSVSAKLYDFIHFLW 550
           CYWPGT+++PR ELPS+ EIR RCM  L+++RPDH+RRLNPTPYKVSVSAKLY+FIH LW
Sbjct: 243 CYWPGTSNKPRVELPSLEEIRGRCMQQLEKLRPDHIRRLNPTPYKVSVSAKLYEFIHSLW 302

Query: 551 LNEAPVGELQ 560
           LNEAPVGELQ
Sbjct: 303 LNEAPVGELQ 312



>Os12g0494100 
          Length = 163

 Score = 76.3 bits (186), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 32/35 (91%), Positives = 32/35 (91%)

Query: 19 PRPTNPMVTPLLTDLYQFTMAYAYWKAGKHLDRAV 53
          PRPTNPMVT LLTDLYQFTM YAYWKAGKHLD AV
Sbjct: 50 PRPTNPMVTQLLTDLYQFTMVYAYWKAGKHLDHAV 84



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.323    0.139    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 18,498,764
Number of extensions: 792596
Number of successful extensions: 1584
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 1584
Number of HSP's successfully gapped: 3
Length of query: 560
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 454
Effective length of database: 11,501,117
Effective search space: 5221507118
Effective search space used: 5221507118
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 159 (65.9 bits)