BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0745200 Os03g0745200|Os03g0745200
         (466 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os03g0745200  Transferase family protein                          637   0.0  
Os02g0653400  Transferase family protein                           70   4e-12

>Os03g0745200 Transferase family protein
          Length = 466

 Score =  637 bits (1643), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/466 (71%), Positives = 335/466 (71%)

Query: 1   MAGGMATGPGSRVTRYAKSTAASVTPVRPGKTHALSALDNAMERHAVYLVLYYRAAPGLD 60
           MAGGMATGPGSRVTRYAKSTAASVTPVRPGKTHALSALDNAMERHAVYLVLYYRAAPGLD
Sbjct: 1   MAGGMATGPGSRVTRYAKSTAASVTPVRPGKTHALSALDNAMERHAVYLVLYYRAAPGLD 60

Query: 61  REPLKESLSDVLSQYPAMTGRLTRPXXXXXXXXXXXXXXXXXXXXVHHGWIVKCNDAGVR 120
           REPLKESLSDVLSQYPAMTGRLTRP                    VHHGWIVKCNDAGVR
Sbjct: 61  REPLKESLSDVLSQYPAMTGRLTRPAAAAAGGGGEGGEGGGATAAVHHGWIVKCNDAGVR 120

Query: 121 TVDATAAATLDEWLATASGEEEMDLAYFEPMGPDPYIWSPFYVQLTEFADKSYALGLSCT 180
           TVDATAAATLDEWLATASGEEEMDLAYFEPMGPDPYIWSPFYVQLTEFADKSYALGLSCT
Sbjct: 121 TVDATAAATLDEWLATASGEEEMDLAYFEPMGPDPYIWSPFYVQLTEFADKSYALGLSCT 180

Query: 181 HLHNDPTXXXXXXXXXXXXHRRDSPYPPFLHXXXXXXXXXXXXXXXXXXXXKSRGSPDTG 240
           HLHNDPT            HRRDSPYPPFLH                    KSRGSPDTG
Sbjct: 181 HLHNDPTAAVLFLNAWAAAHRRDSPYPPFLHSPALAAKSAAPPPEHPLLAAKSRGSPDTG 240

Query: 241 GEMSSATFRFSAAAMRALLSAVEPGTTPFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           GEMSSATFRFSAAAMRALLSAVEPGTTPF                               
Sbjct: 241 GEMSSATFRFSAAAMRALLSAVEPGTTPFAALAALFWLRVAAAAADAAAGGGAAEERELT 300

Query: 301 XXXDFRKRMQAPLPTGYYGTAVHFATARXXXXXXXXXXXXXXXXXXXXXXXXXLWPAIEW 360
              DFRKRMQAPLPTGYYGTAVHFATAR                         LWPAIEW
Sbjct: 301 LALDFRKRMQAPLPTGYYGTAVHFATARADLSSGLASVAAAVERRAAAVPEEELWPAIEW 360

Query: 361 LHTRQAAGGEPFQMYGPELTCMALDHVPLYXXXXXXXXXXXXXXXXXXXXSGEGLVIVLP 420
           LHTRQAAGGEPFQMYGPELTCMALDHVPLY                    SGEGLVIVLP
Sbjct: 361 LHTRQAAGGEPFQMYGPELTCMALDHVPLYGAEFAAGAAPARAACRVGGASGEGLVIVLP 420

Query: 421 SAEGESARDVAVTLPAAVTARICRDGEVLRYGADVVFGPKVDTQAS 466
           SAEGESARDVAVTLPAAVTARICRDGEVLRYGADVVFGPKVDTQAS
Sbjct: 421 SAEGESARDVAVTLPAAVTARICRDGEVLRYGADVVFGPKVDTQAS 466



>Os02g0653400 Transferase family protein
          Length = 385

 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 82/184 (44%), Gaps = 34/184 (18%)

Query: 17  AKSTAASVTPVRPGKTHALSALDNAME----RHAVYLVLYYRAAPGL------DREPLKE 66
           A  TA     V PG+T  ++     +     +  V  VLYYR A G       D   +KE
Sbjct: 20  AVQTAVPTRVVEPGRTRLVAVAAPPLPAPALQRRVRAVLYYRGAGGAAPGAWEDGVWVKE 79

Query: 67  SLSDVLSQYPAMTGRLTRPXXXXXXXXXXXXXXXXXXXXVHHGWIVKCNDAGVRTVDATA 126
           SLS+ L+ +P M GRL R                         W VK ND GVR + AT 
Sbjct: 80  SLSEALADHPEMAGRLRR--------------------RADGSWEVKLNDTGVRLLQATV 119

Query: 127 AATLDEWLATASGEEEMDLA---YFEPMGPDPYIWSPFYVQLTEF-ADKSYALGLSCTHL 182
            ATLDE+LA        + A   + +    DP +  PF++QLT F  D  YA+G+SC  +
Sbjct: 120 DATLDEFLAGKGALARREAALAPWTDVNADDPDMCPPFFMQLTRFQGDGGYAVGVSCALV 179

Query: 183 HNDP 186
             DP
Sbjct: 180 LADP 183



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.318    0.133    0.411 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,652,099
Number of extensions: 399286
Number of successful extensions: 914
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 907
Number of HSP's successfully gapped: 2
Length of query: 466
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 362
Effective length of database: 11,605,545
Effective search space: 4201207290
Effective search space used: 4201207290
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 158 (65.5 bits)