Os03g0745200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transferase family protein.
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Os03g0745200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 328.92 | 0.852 | 5.26 | -1.57 | 1.07 | 1.28 | 0.854 | -5.74 | 0.0601 | 0.265 | 20.6 | 713 | 5.09 | -- |
| 395.37 | 0.926 | 5.13 | -0.598 | 1.23 | 1.4 | 0.381 | -- | 0.341 | 0.388 | 19.87 | 890 | 5.73 | -- |
| 328.73 | 0.844 | 5.26 | -1.53 | 1.19 | 1.2 | -- | -5.71 | 0.111 | 0.469 | 20.7 | 662 | 4 | -- |
| 395.67 | 0.926 | 5.13 | -0.628 | 1.16 | 1.45 | -- | -- | 0.331 | 0.332 | 19.6 | 901 | 6.12 | -- |
| 379.29 | 0.907 | 5.16 | -1.04 | -- | 1.77 | -- | -3.82 | 0.2 | -- | 20.6 | 664 | 7.25 | -- |
| 435.18 | 0.978 | 5.06 | -0.191 | 1.37 | -- | -1.11 | -- | 0.587 | 2.98 | -- | -- | -- | -- |
| 438.72 | 0.981 | 5.06 | -0.166 | 1.35 | -- | -- | -- | 0.594 | 2.69 | -- | -- | -- | -- |
| 395.52 | 0.926 | 5.16 | -0.744 | -- | 2.25 | -- | -- | 0.336 | -- | 19.6 | 937 | 10.7 | -- |
| 404.32 | 0.937 | 5.11 | -- | 0.969 | 1.24 | -- | -- | 0.427 | 0.45 | 20.3 | 839 | 6.64 | -- |
| 545.7 | 1.09 | 5.05 | -0.109 | -- | -- | -- | -- | 0.629 | -- | -- | -- | -- | -- |
| 439.45 | 0.981 | 5.05 | -- | 1.35 | -- | -- | -- | 0.613 | 2.68 | -- | -- | -- | -- |
| 407.98 | 0.941 | 5.09 | -- | -- | 1.93 | -- | -- | 0.437 | -- | 19.6 | 879 | 10.3 | -- |
| 546.01 | 1.09 | 5.05 | -- | -- | -- | -- | -- | 0.641 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 331.34 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 2 | 332.08 | temperature | 15 | 720 | > th | dose dependent | rect. | 20 | 12 |
| 4 | 332.12 | temperature | 20 | 270 | > th | dose independent | rect. | 23 | 9 |
| 5 | 332.71 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 10 |
| 7 | 333.14 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 14 |
| 10 | 333.74 | temperature | 20 | 720 | > th | dose independent | rect. | 20 | 11 |
| 20 | 334.75 | temperature | 15 | 720 | > th | dose dependent | sin | 10 | NA |
| 34 | 336.54 | temperature | 20 | 720 | > th | dose independent | sin | 11 | NA |
| 68 | 339.74 | temperature | 15 | 270 | > th | dose dependent | rect. | 24 | 8 |
| 85 | 341.05 | temperature | 20 | 270 | > th | dose independent | rect. | 12 | 20 |
| 199 | 348.04 | wind | 9 | 4320 | > th | dose dependent | rect. | 17 | 4 |
| 209 | 348.49 | wind | 9 | 4320 | < th | dose independent | rect. | 17 | 5 |
| 212 | 348.64 | wind | 9 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 213 | 348.70 | wind | 9 | 4320 | < th | dose independent | rect. | 16 | 13 |
| 218 | 348.76 | wind | 9 | 4320 | > th | dose independent | rect. | 17 | 5 |
| 232 | 349.20 | wind | 9 | 4320 | > th | dose dependent | rect. | 15 | 16 |
| 240 | 349.42 | wind | 9 | 4320 | > th | dose dependent | rect. | 17 | 12 |
| 251 | 349.76 | wind | 9 | 4320 | > th | dose independent | rect. | 17 | 12 |
| 324 | 351.37 | wind | 9 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 337 | 351.63 | wind | 9 | 4320 | > th | dose dependent | rect. | 15 | 11 |
| 343 | 351.74 | wind | 9 | 4320 | > th | dose dependent | rect. | 17 | 9 |
| 369 | 352.19 | wind | 9 | 4320 | > th | dose independent | rect. | 17 | 9 |
| 403 | 352.82 | wind | 9 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 485 | 354.88 | wind | 9 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 491 | 355.10 | temperature | 15 | 10 | > th | dose dependent | sin | 8 | NA |
| 519 | 355.81 | atmosphere | 995 | 90 | > th | dose dependent | rect. | 9 | 19 |
| 544 | 356.22 | wind | 9 | 4320 | > th | dose dependent | sin | 12 | NA |
| 545 | 356.22 | atmosphere | 995 | 270 | > th | dose dependent | rect. | 7 | 20 |
| 577 | 356.84 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 16 |
| 578 | 356.85 | wind | 9 | 4320 | > th | dose independent | sin | 12 | NA |
| 584 | 357.09 | wind | 1 | 270 | > th | dose independent | rect. | 7 | 20 |
| 588 | 357.15 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 3 |
| 595 | 357.28 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 3 |
| 598 | 357.34 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 607 | 357.53 | wind | 9 | 4320 | < th | dose independent | sin | 12 | NA |
| 615 | 357.62 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 625 | 357.72 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 660 | 358.22 | radiation | 20 | 90 | < th | dose independent | rect. | 15 | 18 |
| 708 | 358.80 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 3 |
| 743 | 359.25 | radiation | 10 | 270 | < th | dose independent | rect. | 3 | 5 |
| 751 | 359.31 | humidity | 80 | 14400 | > th | dose dependent | rect. | 22 | 6 |
| 754 | 359.34 | humidity | 80 | 14400 | > th | dose dependent | rect. | 23 | 4 |
| 761 | 359.39 | humidity | 80 | 14400 | > th | dose dependent | rect. | 22 | 8 |
| 766 | 359.42 | humidity | 80 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 808 | 359.85 | radiation | 40 | 270 | < th | dose independent | rect. | 12 | 19 |
| 832 | 360.02 | temperature | 15 | 10 | > th | dose dependent | rect. | 1 | 9 |
| 901 | 360.66 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 938 | 360.98 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 949 | 361.03 | atmosphere | 995 | 270 | > th | dose independent | rect. | 13 | 18 |
| 981 | 361.32 | radiation | 40 | 90 | < th | dose dependent | rect. | 13 | 20 |
| 986 | 361.39 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |