BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0448700 Os03g0448700|AK102551
(440 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0448700 Interferon-related developmental regulator dom... 801 0.0
Os07g0588000 Interferon-related developmental regulator dom... 594 e-170
Os02g0219100 187 1e-47
Os08g0491400 Interferon-related developmental regulator dom... 155 7e-38
Os02g0219050 Interferon-related developmental regulator dom... 150 1e-36
Os02g0219000 Interferon-related developmental regulator dom... 133 2e-31
>Os03g0448700 Interferon-related developmental regulator domain containing
protein
Length = 440
Score = 801 bits (2068), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/422 (93%), Positives = 396/422 (93%)
Query: 19 EDQFXXXXXXXXXXXXXTALSDLQLAQATEQVSSQDFVLDKYIDDLYEKRGSTREAALGA 78
EDQF TALSDLQLAQATEQVSSQDFVLDKYIDDLYEKRGSTREAALGA
Sbjct: 19 EDQFDGGSDVDSVSSVSTALSDLQLAQATEQVSSQDFVLDKYIDDLYEKRGSTREAALGA 78
Query: 79 LVDAFESFVLLDLVENKYATLLSQFINSIKKGSIKEVCLACHTTGLLAITLGAGSSSHEI 138
LVDAFESFVLLDLVENKYATLLSQFINSIKKGSIKEVCLACHTTGLLAITLGAGSSSHEI
Sbjct: 79 LVDAFESFVLLDLVENKYATLLSQFINSIKKGSIKEVCLACHTTGLLAITLGAGSSSHEI 138
Query: 139 MDESRLQLLRVLQTWPDASKMISALDCLAVVTFVGATDLSETQLSMKAIWDVIHPKSGSN 198
MDESRLQLLRVLQTWPDASKMISALDCLAVVTFVGATDLSETQLSMKAIWDVIHPKSGSN
Sbjct: 139 MDESRLQLLRVLQTWPDASKMISALDCLAVVTFVGATDLSETQLSMKAIWDVIHPKSGSN 198
Query: 199 VGIVRKPKPPXXXXXXXXXXXXXTTIVSSKRNVDSWKESITFLSALLEAEDRAVRMAAGE 258
VGIVRKPKPP TTIVSSKRNVDSWKESITFLSALLEAEDRAVRMAAGE
Sbjct: 199 VGIVRKPKPPLLAAAVSAWALLLTTIVSSKRNVDSWKESITFLSALLEAEDRAVRMAAGE 258
Query: 259 ALALCFELKLLDVFSNEEVEVDTAEASGSKNQLFLNMQALKAKISGLVYNLSMEAGGRGA 318
ALALCFELKLLDVFSNEEVEVDTAEASGSKNQLFLNMQALKAKISGLVYNLSMEAGGRGA
Sbjct: 259 ALALCFELKLLDVFSNEEVEVDTAEASGSKNQLFLNMQALKAKISGLVYNLSMEAGGRGA 318
Query: 319 DKKNLNDQRDLFQRISDFIKTGECLEESLRIAGKHGILRVTSWRESIQLNYLRRFLGRGF 378
DKKNLNDQRDLFQRISDFIKTGECLEESLRIAGKHGILRVTSWRESIQLNYLRRFLGRGF
Sbjct: 319 DKKNLNDQRDLFQRISDFIKTGECLEESLRIAGKHGILRVTSWRESIQLNYLRRFLGRGF 378
Query: 379 LKHAQDNGLLHDIFDIKMDKTENMSTTEKKIYRSGEEKGRALKLNKERRLAQMRKQNILN 438
LKHAQDNGLLHDIFDIKMDKTENMSTTEKKIYRSGEEKGRALKLNKERRLAQMRKQNILN
Sbjct: 379 LKHAQDNGLLHDIFDIKMDKTENMSTTEKKIYRSGEEKGRALKLNKERRLAQMRKQNILN 438
Query: 439 EQ 440
EQ
Sbjct: 439 EQ 440
>Os07g0588000 Interferon-related developmental regulator domain containing
protein
Length = 438
Score = 594 bits (1531), Expect = e-170, Method: Compositional matrix adjust.
Identities = 293/402 (72%), Positives = 331/402 (82%)
Query: 36 TALSDLQLAQATEQVSSQDFVLDKYIDDLYEKRGSTREAALGALVDAFESFVLLDLVENK 95
TALSDL ++ ATE V SQ+FVLDKYID LYEKRGSTREAAL LVDAFESF+L LVENK
Sbjct: 32 TALSDLSMSYATEHVGSQEFVLDKYIDALYEKRGSTREAALSQLVDAFESFILHGLVENK 91
Query: 96 YATLLSQFINSIKKGSIKEVCLACHTTGLLAITLGAGSSSHEIMDESRLQLLRVLQTWPD 155
YATLLS F +SIKKGS KE CLA GLLA+T+GAGSSSHEIM+ES QL RVLQTWPD
Sbjct: 92 YATLLSLFNSSIKKGSTKEACLASRAIGLLALTVGAGSSSHEIMEESHAQLSRVLQTWPD 151
Query: 156 ASKMISALDCLAVVTFVGATDLSETQLSMKAIWDVIHPKSGSNVGIVRKPKPPXXXXXXX 215
ASKMISALDCLAVVTFVGA DL+ET+LS+KA+WDVIHPKSGSNVGI+RKP+PP
Sbjct: 152 ASKMISALDCLAVVTFVGAADLAETELSLKAMWDVIHPKSGSNVGIIRKPRPPVLAAAIS 211
Query: 216 XXXXXXTTIVSSKRNVDSWKESITFLSALLEAEDRAVRMAAGEALALCFELKLLDVFSNE 275
TTI S + N DSWKE I FLS LL AEDRAVRMAAGEALALCFEL LLDV E
Sbjct: 212 AWAFLLTTIGSWRINADSWKEPIAFLSTLLGAEDRAVRMAAGEALALCFELNLLDVSFGE 271
Query: 276 EVEVDTAEASGSKNQLFLNMQALKAKISGLVYNLSMEAGGRGADKKNLNDQRDLFQRISD 335
+ +V+ GSK++LFL+MQALKAKIS L NLSMEAGG+GADKKNL DQRDLFQRI D
Sbjct: 272 DDDVENGGTVGSKSKLFLDMQALKAKISSLASNLSMEAGGKGADKKNLTDQRDLFQRILD 331
Query: 336 FIKTGECLEESLRIAGKHGILRVTSWRESIQLNYLRRFLGRGFLKHAQDNGLLHDIFDIK 395
F+K GEC EES++I+GK +LRV+SW E IQLN+LRRFLGRGFLKH Q+NGLL D+FDIK
Sbjct: 332 FVKYGECPEESVKISGKRDVLRVSSWSELIQLNFLRRFLGRGFLKHVQENGLLQDVFDIK 391
Query: 396 MDKTENMSTTEKKIYRSGEEKGRALKLNKERRLAQMRKQNIL 437
DK E +S+T+KKI+RSGEEKGRALKLNK+RRLAQ RK ++
Sbjct: 392 TDKAETLSSTDKKIFRSGEEKGRALKLNKDRRLAQERKNAVM 433
>Os02g0219100
Length = 483
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 136/388 (35%), Positives = 205/388 (52%), Gaps = 40/388 (10%)
Query: 56 VLDKYIDDLYEKRGSTREAALGALVDAFESFVLLDLVENKYATLLSQFINSIKKGSIKEV 115
V+++ I L+EKRGSTREAA+ LV A E V V KY T++S+ + S+KKGS++E
Sbjct: 48 VVERCIVALFEKRGSTREAAMEDLVGALEGHVSAREVSCKYTTIVSRCVFSLKKGSVREA 107
Query: 116 CLACHTTGLLAITL----GAGSSSHEIMDESRLQLLRVLQTWPDASKMISALDCLAVVTF 171
LA G+LA+TL + + +++ E+ L + ++ D +K+++A+D LAV TF
Sbjct: 108 RLAYRAIGILALTLGGGGDDTAGAKDVLAEAFPFLAKTVEASHDMAKVLAAIDGLAVATF 167
Query: 172 VGATDLSETQLSMKAIW-DVIHPKS----GSNV--GIVRKPKPPXXXXXXXXXXXXXTTI 224
G E + SM AIW VI P S GS + G RK P T+
Sbjct: 168 AGEDGDDEIERSMDAIWGGVIDPSSAGPGGSRLAAGDARK-TTPEALAAAVSAWAFLLTV 226
Query: 225 VSSKRNV---DSWKESITFLSALL-EAEDRAVRMAAGEALALCFELKLLDVFSNEEVEVD 280
V + +S K+ I L+ LL + +DR VR+AAGEA+A C ELKL E
Sbjct: 227 VHDRYEAEEGESCKDKIALLAKLLDDHDDRGVRVAAGEAIAACVELKLAHDTPPE----- 281
Query: 281 TAEASGSKNQLFLNMQALKAKISGLVYNLSMEAGGRGA-DKKNLNDQRDLFQRISDFIKT 339
+M+AL A +S L+ E G+GA DK+ Q+D+F++I F+
Sbjct: 282 -------------DMEALNATVS----YLATEPSGKGAGDKRRHAGQKDIFRQIEIFLDD 324
Query: 340 GECLEESLRI-AGKHGILRVTSWRESIQLNYLRRFLGRGFLKHAQDNGLLHDIFDIKMDK 398
GE +S+R + + +L+VT+W + +QLN+L R+LG GF H Q N L + F++ D+
Sbjct: 325 GEAPTKSVRTSSSRQSVLKVTTWTKLLQLNFLTRYLGNGFHSHLQHNPLFGETFEVDGDE 384
Query: 399 TENMSTTEKKIYRSGEEKGRALKLNKER 426
E + K + R EK R L+ + R
Sbjct: 385 VEGLPAARKMMSRKQREKKRTLERRRCR 412
>Os08g0491400 Interferon-related developmental regulator domain containing
protein
Length = 436
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 136/414 (32%), Positives = 207/414 (50%), Gaps = 60/414 (14%)
Query: 48 EQVSSQDFVLDKYIDDLYEKRGSTREAALGALVDAFESFVLLDLVE-NKYATLLSQFINS 106
++++ + VL+K ++E R STREAAL +LV A E FV + + ++ S
Sbjct: 39 QKINQRVAVLEKVAVSVHESRASTREAALASLVGALEGFVPAHFIGWHLRGEIVRGCCAS 98
Query: 107 IKKGSI-KEVCLACHTTGLLAITLGAGS-----------------SSHEIMDESRLQLLR 148
IKKG+ KE LA LLA+TLG GS S +IM E+ + R
Sbjct: 99 IKKGAAAKEARLALRAVALLAVTLGPGSKRRILPAETYNPLEPGPGSKKIMAETFPLVSR 158
Query: 149 VLQTWPDASKMISALDCLAVVTFVGAT--DLSETQLSMKAIWDVIHPKSGSNV-GIVRKP 205
+L+ DA +I+AL+ LAVV FV ++ +T+ MKA+W +I P +G V G+ RK
Sbjct: 159 ILEVSTDAPLVIAALESLAVVAFVDVAAENMDDTEACMKALWGLIRPSTGPKVAGVARKT 218
Query: 206 KPPXXXXXXXXXXXXXTTI------VSSKRNVDSWKESITFLSALLEAEDRAVRMAAGEA 259
P TT ++ + +W+++ L++LL ++ RAVRMAAGEA
Sbjct: 219 SPHVLAAAVSAWTLVLTTTDGWKKKKAAASSPAAWRDTAAHLASLLHSDSRAVRMAAGEA 278
Query: 260 LALCFELKLLDVFSNEEVEVDTAEASGSKNQLFLNMQALKAKISGLVYNLSMEAGGRGAD 319
LA+ E+KLL SN AL + ++ L+ EA G G
Sbjct: 279 LAVTIEMKLLTRDSN---------------------GALISGVAARASELANEAAGAGVG 317
Query: 320 KKNLNDQRDLFQRISDFIKTGECLEESLRI-AGKHGILRVTSWRESIQLNYLRRFLGRGF 378
K N +Q++LF I+ F+ G+ S+R + HG L ++W + ++LN+LRRFLG GF
Sbjct: 318 KANFVEQKELFNSITTFLAGGKAPASSVRASSSHHGRLTASTWTDIVRLNFLRRFLGGGF 377
Query: 379 LKHAQDNGLLHD----IFDIKMDKTENMSTTEKKIYRSGEEKGRALKLNKERRL 428
L H Q L+ + I + + K ++M+ KK EK R LN+ER +
Sbjct: 378 LPHLQGKVLMGEEAPLIGQVFVVKEDDMAMDHKKKV----EKQR--TLNRERSI 425
>Os02g0219050 Interferon-related developmental regulator domain containing
protein
Length = 455
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 136/417 (32%), Positives = 209/417 (50%), Gaps = 65/417 (15%)
Query: 48 EQVSSQDFVLDKYIDDLYEKRGSTREAALGALVDAFESFVLLDLVE-NKYATLLSQFINS 106
++++ + VL+K ++E R STREAAL +LV A E FV + + ++ S
Sbjct: 38 QKINQRVAVLEKAAVSVHESRASTREAALASLVGALEGFVPAHFIGWHHRGEIVRGCCAS 97
Query: 107 IKKGSIKEVCLACHTTGLLAITLGAGS-----------------SSHEIMDESRLQLLRV 149
IKKG+ KE LA LLA+TLG GS S +IM E+ + R+
Sbjct: 98 IKKGAAKEARLALRAVALLAVTLGPGSKRRILPAETYNPLEPGPGSKKIMAETFPLVSRI 157
Query: 150 LQTWPDASKMISALDCLAVVTFVGAT--DLSETQLSMKAIWDVIHPKSGSNVG-IVRKPK 206
L+ DAS +I+AL+ LAVV FV ++ +T+ MKA+W +I P +G +G RK
Sbjct: 158 LEVSTDASLVIAALESLAVVAFVDVAAENMDDTEACMKALWGLIRPSTGPKLGGAARKTS 217
Query: 207 PPXXXXXXXXXXXXXTTIVSSKR------NVDSWKESITFLSALLEAEDRAVRMAAGEAL 260
P TT K+ + +W+++ L+ LL ++ RAVRMAAGEAL
Sbjct: 218 PHVLAAAVSAWTLVLTTTDGWKKKKAASSSPTAWRDTAAHLAPLLHSDSRAVRMAAGEAL 277
Query: 261 ALCFELKLLDVFSNEEVEVDTAEASGSKNQLFLNMQALKAKISGLVYNLSMEAGGRGADK 320
A+ E+KL+ T ++ G AL + ++ L+ EA G G K
Sbjct: 278 AVTIEMKLV-----------TRDSHG----------ALISGVAARASELANEAAGAGVGK 316
Query: 321 KNLNDQRDLFQRISDFIKTGEC-LEESLRIAGKHGILRVTSWRESIQLNYLRRFLGRGFL 379
N +Q++LF+ I+ F+ G+ + HG L ++W + ++LN+LRRFLG GFL
Sbjct: 317 ANFVEQKELFKSIASFLAGGKAPASSVRVSSSHHGRLTASTWTDIVRLNFLRRFLGGGFL 376
Query: 380 KHAQ-------DNGLLHDIFDIKMDKTENMSTTEKKIYRSGEEKGRALKLNKERRLA 429
H Q + L+ +F +K D +M+ +KK +K R LNKER++A
Sbjct: 377 PHLQGKVVMGEEAPLIGQVFVVKED---DMAMDQKKKV----DKQRT--LNKERQIA 424
>Os02g0219000 Interferon-related developmental regulator domain containing
protein
Length = 467
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/374 (31%), Positives = 186/374 (49%), Gaps = 52/374 (13%)
Query: 56 VLDKYIDDLYEKRGSTREAALGALVDAFESFVLLDLVENKYA-TLLSQFINSIKKGSIKE 114
VL+K +++ STREAAL L+ A E F+ D E + +L SIKK + +E
Sbjct: 42 VLEKVAVSVHDSLASTREAALAELIAALEGFLSADDAEGGHTDEILRGCYVSIKKRAARE 101
Query: 115 VCLACHTTGLLAITLGAGSSS-----------------HEIMDESRLQLLRVLQT-WPDA 156
C+A LLA+TLG G++S ++IM + R+L+ DA
Sbjct: 102 ACVALRAVALLAVTLGPGATSKKIAAVETAANPLGSGANKIMKATYPLASRILEAPQADA 161
Query: 157 SKMISALDCLAVVTFVGAT--DLSETQLSMKAIWDVIHPKSGSNVGIVRK----PKPPXX 210
S +++AL+CLAVV FV ++ +T+ M A+W VI P +G + K P+
Sbjct: 162 SLVVAALECLAVVAFVDVAAENMDDTEACMNALWAVICPSAGPKLASAAKGTASPRVLAA 221
Query: 211 XXXXXXXXXXXTTIVSSKRNVDS---WKESITF--LSALLEAEDRAVRMAAGEALALCFE 265
T + K+ V W+ + L +LL ++ R VRMAAGEALA+ E
Sbjct: 222 AVSAWTLVLTTTGGWNKKKKVSPAAPWRGAAAHAHLVSLLGSDSREVRMAAGEALAVAIE 281
Query: 266 LKLLDVFSNEEVEVDTAEASGSKNQLFLNMQALKAKISGLVYNLSMEAGGRGADKKNLND 325
+KL +N LF M+A + +L+ +A G G DK N +
Sbjct: 282 MKLFTEKNN--------------GALFSKMEARAS-------DLANDAAGAGVDKTNFVE 320
Query: 326 QRDLFQRISDFIKTGECLEESLRIAG-KHGILRVTSWRESIQLNYLRRFLGRGFLKHAQD 384
Q++LF+ I+ F+ G+ S+R + +G+L ++W ++++LN+LRRFL GFL H Q
Sbjct: 321 QKELFKDITTFLAGGKPPVISVRTSSSNYGLLTTSTWTDNVRLNFLRRFLAGGFLHHLQG 380
Query: 385 NGLLHDIFDIKMDK 398
GL+ +F I D+
Sbjct: 381 KGLMGQVFVIDDDE 394
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.132 0.365
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,438,679
Number of extensions: 424433
Number of successful extensions: 1133
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 1112
Number of HSP's successfully gapped: 6
Length of query: 440
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 336
Effective length of database: 11,605,545
Effective search space: 3899463120
Effective search space used: 3899463120
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 157 (65.1 bits)