BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0432100 Os03g0432100|AK065739
(796 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0432100 Similar to Orthophosphate dikinase precursor (... 1609 0.0
Os05g0405000 Orthophosphate dikinase precursor (EC 2.7.9.1) 1389 0.0
Os03g0432700 92 1e-18
>Os03g0432100 Similar to Orthophosphate dikinase precursor (EC 2.7.9.1)
Length = 796
Score = 1609 bits (4166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 781/796 (98%), Positives = 781/796 (98%)
Query: 1 MGAVLGDPRRPLLLSVRSGAAVSMPGMMDTVLNLGLNDHVVAGLAHRSGERFAYDSYRRF 60
MGAVLGDPRRPLLLSVRSGAAVSMPGMMDTVLNLGLNDHVVAGLAHRSGERFAYDSYRRF
Sbjct: 1 MGAVLGDPRRPLLLSVRSGAAVSMPGMMDTVLNLGLNDHVVAGLAHRSGERFAYDSYRRF 60
Query: 61 LDMFGNVVMDIPHSLFEEKIEAMKAALGLRNDTELTARDLKELVAQYKNVYVEAKGEEFP 120
LDMFGNVVMDIPHSLFEEKIEAMKAALGLRNDTELTARDLKELVAQYKNVYVEAKGEEFP
Sbjct: 61 LDMFGNVVMDIPHSLFEEKIEAMKAALGLRNDTELTARDLKELVAQYKNVYVEAKGEEFP 120
Query: 121 SDPKKQLHLSVLAVFNSWDSARAKKYRSINQITGLKGTAVNVQCMVFGNMGDTSGTGVLF 180
SDPKKQLHLSVLAVFNSWDSARAKKYRSINQITGLKGTAVNVQCMVFGNMGDTSGTGVLF
Sbjct: 121 SDPKKQLHLSVLAVFNSWDSARAKKYRSINQITGLKGTAVNVQCMVFGNMGDTSGTGVLF 180
Query: 181 TRNPSTGERKLYGEFLVNAQGEDVVAGIRTPQDLDTMKDCMPEPYAELVENCKILESHYK 240
TRNPSTGERKLYGEFLVNAQGEDVVAGIRTPQDLDTMKDCMPEPYAELVENCKILESHYK
Sbjct: 181 TRNPSTGERKLYGEFLVNAQGEDVVAGIRTPQDLDTMKDCMPEPYAELVENCKILESHYK 240
Query: 241 EMMDIEFTVQENRLWMLQCRTGKRTGKGAVKIAVDMVNEGLIDRRSAIKMVEPRHLDQLL 300
EMMDIEFTVQENRLWMLQCRTGKRTGKGAVKIAVDMVNEGLIDRRSAIKMVEPRHLDQLL
Sbjct: 241 EMMDIEFTVQENRLWMLQCRTGKRTGKGAVKIAVDMVNEGLIDRRSAIKMVEPRHLDQLL 300
Query: 301 HPQFESPSSYGDKVIATGLPASPGAAVGQIVFTADDAEAWHAQGKSVILVRTETSPEDVG 360
HPQFESPSSYGDKVIATGLPASPGAAVGQIVFTADDAEAWHAQGKSVILVRTETSPEDVG
Sbjct: 301 HPQFESPSSYGDKVIATGLPASPGAAVGQIVFTADDAEAWHAQGKSVILVRTETSPEDVG 360
Query: 361 GMNAAAGILTARGGMTSHAAVVARGWGKCCVAGCSGIRVNDAEKVVLVADKVLCEGEWLS 420
GMNAAAGILTARGGMTSHAAVVARGWGKCCVAGCSGIRVNDAEKVVLVADKVLCEGEWLS
Sbjct: 361 GMNAAAGILTARGGMTSHAAVVARGWGKCCVAGCSGIRVNDAEKVVLVADKVLCEGEWLS 420
Query: 421 LNGSTGEVILGKLPLSPPALSGDLGEFMSWVDEVKKLKVKANADTPADALTARNNGAEGI 480
LNGSTGEVILGKLPLSPPALSGDLGEFMSWVDEVKKLKVKANADTPADALTARNNGAEGI
Sbjct: 421 LNGSTGEVILGKLPLSPPALSGDLGEFMSWVDEVKKLKVKANADTPADALTARNNGAEGI 480
Query: 481 GLCRTEHMFFSSDERIKAMRQMIMAETIEHRQIALDRLLPYQRLDFEGIFRAMDGLPVTI 540
GLCRTEHMFFSSDERIKAMRQMIMAETIEHRQIALDRLLPYQRLDFEGIFRAMDGLPVTI
Sbjct: 481 GLCRTEHMFFSSDERIKAMRQMIMAETIEHRQIALDRLLPYQRLDFEGIFRAMDGLPVTI 540
Query: 541 RLLDPPLHEFLPEGNVEDMVRLLSSGNVYTQEEILTRIEKLSEVNPMLGFRGCRLGISYP 600
RLLDPPLHEFLPEGNVEDMVRLLSSGNVYTQEEILTRIEKLSEVNPMLGFRGCRLGISYP
Sbjct: 541 RLLDPPLHEFLPEGNVEDMVRLLSSGNVYTQEEILTRIEKLSEVNPMLGFRGCRLGISYP 600
Query: 601 ELTAMQARAIFEAAISMTEQGVKVFPEIMVPLIGTPQELAQQVDVIREVAEKVFANAETT 660
ELTAMQARAIFEAAISMTEQGVKVFPEIMVPLIGTPQELAQQVDVIREVAEKVFANAETT
Sbjct: 601 ELTAMQARAIFEAAISMTEQGVKVFPEIMVPLIGTPQELAQQVDVIREVAEKVFANAETT 660
Query: 661 ISYKIGSMIEVPRXXXXXXXXXXXXXXXSFGTNDLTQMTFGYSRDDVGKFLPTYLSKGIL 720
ISYKIGSMIEVPR SFGTNDLTQMTFGYSRDDVGKFLPTYLSKGIL
Sbjct: 661 ISYKIGSMIEVPRAALIADEIAALAEFFSFGTNDLTQMTFGYSRDDVGKFLPTYLSKGIL 720
Query: 721 QNDPFEVFDQKGVGELVKVAVERGRKARPDLEVGICGEHGGEPSSVAFFAKVGLNYVSCS 780
QNDPFEVFDQKGVGELVKVAVERGRKARPDLEVGICGEHGGEPSSVAFFAKVGLNYVSCS
Sbjct: 721 QNDPFEVFDQKGVGELVKVAVERGRKARPDLEVGICGEHGGEPSSVAFFAKVGLNYVSCS 780
Query: 781 PFRVPIARLAAAQVML 796
PFRVPIARLAAAQVML
Sbjct: 781 PFRVPIARLAAAQVML 796
>Os05g0405000 Orthophosphate dikinase precursor (EC 2.7.9.1)
Length = 947
Score = 1389 bits (3596), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 665/796 (83%), Positives = 718/796 (90%)
Query: 1 MGAVLGDPRRPLLLSVRSGAAVSMPGMMDTVLNLGLNDHVVAGLAHRSGERFAYDSYRRF 60
M A LGDP RPLLLSVRSGAAVSMPGMMDTVLNLGLND V AGLA +SG+RFAYDSYRRF
Sbjct: 152 MAARLGDPARPLLLSVRSGAAVSMPGMMDTVLNLGLNDEVAAGLAAKSGDRFAYDSYRRF 211
Query: 61 LDMFGNVVMDIPHSLFEEKIEAMKAALGLRNDTELTARDLKELVAQYKNVYVEAKGEEFP 120
LDMFGNVVMDIPH+LFEEK+EAMKA GL NDT+LTA DLKELVAQYK+VYVEAKGE FP
Sbjct: 212 LDMFGNVVMDIPHALFEEKLEAMKAVKGLHNDTDLTATDLKELVAQYKDVYVEAKGEPFP 271
Query: 121 SDPKKQLHLSVLAVFNSWDSARAKKYRSINQITGLKGTAVNVQCMVFGNMGDTSGTGVLF 180
SDPKKQL L+VLAVFNSWDS RA KYRSIN+ITGLKGTAVNVQ MVFGNMG+TSGTGVLF
Sbjct: 272 SDPKKQLQLAVLAVFNSWDSPRAIKYRSINKITGLKGTAVNVQTMVFGNMGNTSGTGVLF 331
Query: 181 TRNPSTGERKLYGEFLVNAQGEDVVAGIRTPQDLDTMKDCMPEPYAELVENCKILESHYK 240
TRNPSTGE+KLYGEFLVNAQGEDVVAGIRTP+DLD M+D MPEPY ELVENCKILESHYK
Sbjct: 332 TRNPSTGEKKLYGEFLVNAQGEDVVAGIRTPEDLDAMRDHMPEPYEELVENCKILESHYK 391
Query: 241 EMMDIEFTVQENRLWMLQCRTGKRTGKGAVKIAVDMVNEGLIDRRSAIKMVEPRHLDQLL 300
EMMDIEFTVQENRLWMLQCRTGKRTGKGAVKIAVDMVNEGL++RR+A+KMVEP HLDQLL
Sbjct: 392 EMMDIEFTVQENRLWMLQCRTGKRTGKGAVKIAVDMVNEGLVERRTALKMVEPGHLDQLL 451
Query: 301 HPQFESPSSYGDKVIATGLPASPGAAVGQIVFTADDAEAWHAQGKSVILVRTETSPEDVG 360
HPQFE+PS Y DKVIATGLPASPGAAVGQIVFTA+DAEAWHAQGK VILVRTETSPEDVG
Sbjct: 452 HPQFENPSGYKDKVIATGLPASPGAAVGQIVFTAEDAEAWHAQGKDVILVRTETSPEDVG 511
Query: 361 GMNAAAGILTARGGMTSHAAVVARGWGKCCVAGCSGIRVNDAEKVVLVADKVLCEGEWLS 420
GM+AA GILTARGGMTSHAAVVARGWGKCCV+GCS +RVNDA K+V++ DK L EGEWLS
Sbjct: 512 GMHAAVGILTARGGMTSHAAVVARGWGKCCVSGCSSVRVNDASKIVVIEDKALHEGEWLS 571
Query: 421 LNGSTGEVILGKLPLSPPALSGDLGEFMSWVDEVKKLKVKANADTPADALTARNNGAEGI 480
LNGSTGEVI+GK PL PPALSGDL FMSWVDEV+KLKV ANADTP DA TAR NGAEGI
Sbjct: 572 LNGSTGEVIIGKQPLCPPALSGDLETFMSWVDEVRKLKVMANADTPEDATTARQNGAEGI 631
Query: 481 GLCRTEHMFFSSDERIKAMRQMIMAETIEHRQIALDRLLPYQRLDFEGIFRAMDGLPVTI 540
GLCRTEHMFF+SDERIKA+RQMIMA ++E RQ ALDRLLPYQR DFEGIFRAMDGLPVTI
Sbjct: 632 GLCRTEHMFFASDERIKAVRQMIMASSLELRQKALDRLLPYQRSDFEGIFRAMDGLPVTI 691
Query: 541 RLLDPPLHEFLPEGNVEDMVRLLSSGNVYTQEEILTRIEKLSEVNPMLGFRGCRLGISYP 600
RLLDPPLHEFLPEG+VEDMVR L S Q+++L R+EKLSEVNPMLGFRGCRLGISYP
Sbjct: 692 RLLDPPLHEFLPEGHVEDMVRELCSETGAAQDDVLARVEKLSEVNPMLGFRGCRLGISYP 751
Query: 601 ELTAMQARAIFEAAISMTEQGVKVFPEIMVPLIGTPQELAQQVDVIREVAEKVFANAETT 660
ELT MQARAIFEAAI+MT QG++VFPEIMVPL+GTPQEL QVDVIR++A KVF + T
Sbjct: 752 ELTEMQARAIFEAAITMTNQGIQVFPEIMVPLVGTPQELGHQVDVIRQIANKVFTDMGKT 811
Query: 661 ISYKIGSMIEVPRXXXXXXXXXXXXXXXSFGTNDLTQMTFGYSRDDVGKFLPTYLSKGIL 720
I YK+G+MIE+PR SFGTNDLTQMTFGYSRDDVGKFLP YLS+GIL
Sbjct: 812 IGYKVGTMIEIPRAALVADEIAEQAEFFSFGTNDLTQMTFGYSRDDVGKFLPIYLSQGIL 871
Query: 721 QNDPFEVFDQKGVGELVKVAVERGRKARPDLEVGICGEHGGEPSSVAFFAKVGLNYVSCS 780
Q+DPFEV DQ+GVGELVK+A ERGRKARP+L+VGICGEHGGEP SVAFFAK GL+YVSCS
Sbjct: 872 QHDPFEVLDQRGVGELVKLATERGRKARPNLKVGICGEHGGEPLSVAFFAKAGLDYVSCS 931
Query: 781 PFRVPIARLAAAQVML 796
PFRVPIARLAAAQV+L
Sbjct: 932 PFRVPIARLAAAQVLL 947
>Os03g0432700
Length = 221
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/46 (97%), Positives = 45/46 (97%)
Query: 304 FESPSSYGDKVIATGLPASPGAAVGQIVFTADDAEAWHAQGKSVIL 349
FES SSYGDKVIATGLPASPGAAVGQIVFTADDAEAWHAQGKSVIL
Sbjct: 11 FESLSSYGDKVIATGLPASPGAAVGQIVFTADDAEAWHAQGKSVIL 56
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.136 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 26,262,998
Number of extensions: 1112126
Number of successful extensions: 3000
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 3000
Number of HSP's successfully gapped: 3
Length of query: 796
Length of database: 17,035,801
Length adjustment: 109
Effective length of query: 687
Effective length of database: 11,344,475
Effective search space: 7793654325
Effective search space used: 7793654325
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 160 (66.2 bits)