BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0418700 Os03g0418700|AK101797
(925 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0418700 Conserved hypothetical protein 1816 0.0
Os07g0603300 Conserved hypothetical protein 784 0.0
Os07g0109400 Conserved hypothetical protein 244 2e-64
>Os03g0418700 Conserved hypothetical protein
Length = 925
Score = 1816 bits (4704), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 887/925 (95%), Positives = 887/925 (95%)
Query: 1 MPSRMMQAFAQEASDFDRQMGCMAGMFQIFDRRRLLTARQRGGARGTAPPGHVLPNSNSN 60
MPSRMMQAFAQEASDFDRQMGCMAGMFQIFDRRRLLTARQRGGARGTAPPGHVLPNSNSN
Sbjct: 1 MPSRMMQAFAQEASDFDRQMGCMAGMFQIFDRRRLLTARQRGGARGTAPPGHVLPNSNSN 60
Query: 61 VSIQNPVASNNTLDKTFSKSMTENXXXXXXXXXXXXXXXXXXXXXXTDINRPIQQELSYI 120
VSIQNPVASNNTLDKTFSKSMTEN TDINRPIQQELSYI
Sbjct: 61 VSIQNPVASNNTLDKTFSKSMTENSSLSMESSRASSSSSSCSSFSSTDINRPIQQELSYI 120
Query: 121 NKERFAGKPPRSSQTKSVKCSKTEAKTKDPHTGFRDIVKESINRETHGMTIKTSTKESRK 180
NKERFAGKPPRSSQTKSVKCSKTEAKTKDPHTGFRDIVKESINRETHGMTIKTSTKESRK
Sbjct: 121 NKERFAGKPPRSSQTKSVKCSKTEAKTKDPHTGFRDIVKESINRETHGMTIKTSTKESRK 180
Query: 181 GLHKDSPRPLLISKSTDGTYVIGIDRSTGVPGYVHESSRPPRFSCDDRQLLRSVEAQDSK 240
GLHKDSPRPLLISKSTDGTYVIGIDRSTGVPGYVHESSRPPRFSCDDRQLLRSVEAQDSK
Sbjct: 181 GLHKDSPRPLLISKSTDGTYVIGIDRSTGVPGYVHESSRPPRFSCDDRQLLRSVEAQDSK 240
Query: 241 KPSAKLKELPRLSLDSRKESMNPCSRLKNSGYIRTDDNLLDVLKHQESPSHQRASSVVAK 300
KPSAKLKELPRLSLDSRKESMNPCSRLKNSGYIRTDDNLLDVLKHQESPSHQRASSVVAK
Sbjct: 241 KPSAKLKELPRLSLDSRKESMNPCSRLKNSGYIRTDDNLLDVLKHQESPSHQRASSVVAK 300
Query: 301 LMGLEGTTPDIHETARSPTPVHGTQIDQPSHCQRIKNQDHSVPVQKNHSPVLKTNPSPRI 360
LMGLEGTTPDIHETARSPTPVHGTQIDQPSHCQRIKNQDHSVPVQKNHSPVLKTNPSPRI
Sbjct: 301 LMGLEGTTPDIHETARSPTPVHGTQIDQPSHCQRIKNQDHSVPVQKNHSPVLKTNPSPRI 360
Query: 361 IPEAAPWRQNERAVTGRAAEVKPRTASIYADIQRRLRGLELSECNKELRALRILSTLHKK 420
IPEAAPWRQNERAVTGRAAEVKPRTASIYADIQRRLRGLELSECNKELRALRILSTLHKK
Sbjct: 361 IPEAAPWRQNERAVTGRAAEVKPRTASIYADIQRRLRGLELSECNKELRALRILSTLHKK 420
Query: 421 DGPSQSDNNPELTAIQKKASEQIVDSENFQSPIVIMKPARCITKPDASDTLVAPLSRPKG 480
DGPSQSDNNPELTAIQKKASEQIVDSENFQSPIVIMKPARCITKPDASDTLVAPLSRPKG
Sbjct: 421 DGPSQSDNNPELTAIQKKASEQIVDSENFQSPIVIMKPARCITKPDASDTLVAPLSRPKG 480
Query: 481 IRRLRHEETSFTRKNENSDSKRNHSPNESAHSSGEEPVNXXXXXXXXXXXXXXXXQKKAD 540
IRRLRHEETSFTRKNENSDSKRNHSPNESAHSSGEEPVN QKKAD
Sbjct: 481 IRRLRHEETSFTRKNENSDSKRNHSPNESAHSSGEEPVNSARSPRLSSSLSPRLAQKKAD 540
Query: 541 SERRSRPPVLPTSPGKKSKETVSPRGRLRSRHSQTKSNSDNDNVLHIPETKINLAKQIDV 600
SERRSRPPVLPTSPGKKSKETVSPRGRLRSRHSQTKSNSDNDNVLHIPETKINLAKQIDV
Sbjct: 541 SERRSRPPVLPTSPGKKSKETVSPRGRLRSRHSQTKSNSDNDNVLHIPETKINLAKQIDV 600
Query: 601 GVVDHPNPLNANSPYIHQSKIASTPNREEMPTILPADKKKIHPQENIPSPVSVLDATFYH 660
GVVDHPNPLNANSPYIHQSKIASTPNREEMPTILPADKKKIHPQENIPSPVSVLDATFYH
Sbjct: 601 GVVDHPNPLNANSPYIHQSKIASTPNREEMPTILPADKKKIHPQENIPSPVSVLDATFYH 660
Query: 661 EGSSPSLKRISDSFKDGETHTSDESWNPTSLPDTPPSKASNDGNQIKAENMKALIQKLEL 720
EGSSPSLKRISDSFKDGETHTSDESWNPTSLPDTPPSKASNDGNQIKAENMKALIQKLEL
Sbjct: 661 EGSSPSLKRISDSFKDGETHTSDESWNPTSLPDTPPSKASNDGNQIKAENMKALIQKLEL 720
Query: 721 LQMLSEEALKTDDTFSSVAANKDHQYLYEILSASGILHNKLNFQMMPHQLRPSSYPINPE 780
LQMLSEEALKTDDTFSSVAANKDHQYLYEILSASGILHNKLNFQMMPHQLRPSSYPINPE
Sbjct: 721 LQMLSEEALKTDDTFSSVAANKDHQYLYEILSASGILHNKLNFQMMPHQLRPSSYPINPE 780
Query: 781 LFLILEQAKPDEEKLHRRLIFDLANELLAQQMDANHTVNSSVQFFQSKKLSGWQLFKDLC 840
LFLILEQAKPDEEKLHRRLIFDLANELLAQQMDANHTVNSSVQFFQSKKLSGWQLFKDLC
Sbjct: 781 LFLILEQAKPDEEKLHRRLIFDLANELLAQQMDANHTVNSSVQFFQSKKLSGWQLFKDLC 840
Query: 841 AEIDMIQSRSSMIRCSEEEDSRLAEDAMQGMKEWKSSDSERQGIVLAIEKSIFKDLIDEI 900
AEIDMIQSRSSMIRCSEEEDSRLAEDAMQGMKEWKSSDSERQGIVLAIEKSIFKDLIDEI
Sbjct: 841 AEIDMIQSRSSMIRCSEEEDSRLAEDAMQGMKEWKSSDSERQGIVLAIEKSIFKDLIDEI 900
Query: 901 ISGVDKGKVHLTQWKLRRQLSFISI 925
ISGVDKGKVHLTQWKLRRQLSFISI
Sbjct: 901 ISGVDKGKVHLTQWKLRRQLSFISI 925
>Os07g0603300 Conserved hypothetical protein
Length = 940
Score = 784 bits (2024), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/954 (49%), Positives = 606/954 (63%), Gaps = 75/954 (7%)
Query: 12 EASDFDRQMGCMAGMFQIFDRR-RLLTARQR--GGARGTAPPGHVLPNSNSNVSIQNPVA 68
EA + +RQMGCMAG+FQIFDRR RLLTAR+R PGH LP S+SNV+ Q+
Sbjct: 19 EAPELERQMGCMAGIFQIFDRRQRLLTARRRRPPPKMLPPGPGHTLPRSSSNVAAQSSST 78
Query: 69 SNNTLDKTFSKSMTENXXXXXXXXXXXXXXXXXXXXXXTDINRPIQQELSYINKERFAGK 128
S L+KTFSKSMTEN D N+ IQQEL YIN++ F +
Sbjct: 79 SKIVLEKTFSKSMTENSSLSIESSRASCSSSSCSSFSSLDGNKSIQQELPYINEQLFVQR 138
Query: 129 PPRSSQTKSVKCSKTEAKTKDPHTGFRDIVKESINRETHGMTIKTSTKESRK-GLHKDSP 187
P +SS S+K + ++ + GFRDIVK+SINR+T G+T+KTS K++R+ G +KDSP
Sbjct: 139 PLKSS--PSLKDPVMDTRSGQSNIGFRDIVKDSINRDTGGLTVKTSVKDARRNGQYKDSP 196
Query: 188 RPLLISKSTDGTYVIGIDRSTGVPGYVHESSR----PPRFSCDDRQLLRSVEAQDSKKPS 243
RPLL+SKS DGTYVIGIDRST VP ESSR RFSCDDR+LLR VEAQ++KKPS
Sbjct: 197 RPLLLSKSMDGTYVIGIDRSTKVPANAVESSRRFPEQSRFSCDDRRLLRPVEAQENKKPS 256
Query: 244 AKLKELPRLSLDSRKESMNPCSRLKNSGYIRTDDNLLDVLKHQESPSHQRASSVVAKLMG 303
+LKELPRLSLDSRKE+++ SR K Y RTDD+L+D L+ Q+SP H+RASSV+AKLMG
Sbjct: 257 TRLKELPRLSLDSRKETLSSSSRQKTFSYRRTDDSLMDALRPQDSPGHRRASSVIAKLMG 316
Query: 304 LEGT-------TPDIHETARSPTPVHGTQIDQPSHCQRIKNQDHSVPVQKNHSPVLKTNP 356
LE T D +E RSP P TQ + P R QD + K+ SP +KT P
Sbjct: 317 LEEAPNATGVLTVDSYEPERSPRPAEDTQKEHPVPSPRRFCQDPRESLPKDESPAMKTKP 376
Query: 357 SPRIIPEAAPWRQNERAVTG------RAAEVKPRTASIYADIQRRLRGLELSECNKELRA 410
SPRI+ E+APWRQ E+ T R AEV+PRTAS+YA I+RR GLE ECNK+ RA
Sbjct: 377 SPRILTESAPWRQQEKIATSSKASQCRDAEVRPRTASLYAYIERRGGGLEFLECNKDFRA 436
Query: 411 LRILSTLHKKDGPSQSDNNPELTAIQKKASEQI-VDSENFQSPIVIMKPARCITK-PDAS 468
LRIL LH KD Q+D N LT ++A + + S +FQ PIV+MKPAR K P S
Sbjct: 437 LRILEALHAKDAKRQNDGNGALTVAAQQAGDALNTSSRHFQPPIVVMKPARSTEKQPGVS 496
Query: 469 DTLVAPLSRPKGIRRLRHEETSFTRKNENSDSKRNHSPNESAHSSGEEPVNXXXXXXXXX 528
V PL+ + +R+L+ + ++E S +++ HS A S +EP +
Sbjct: 497 LASVDPLAGFRNLRKLQARDAPCIGEHETSTNEKVHSRISRAQSKSDEPASRASSPRPTG 556
Query: 529 XXXXXXXQKKADSERRSRPPVLPTSPGKKSKETVSPRGRLRSRHSQTKSNSDNDNVLHIP 588
Q+KA+SERRSRPPV P SP KKS E SP GR R++ SQ K++ DN+ V P
Sbjct: 557 SSSPRTVQRKAESERRSRPPVSPKSPSKKSSEAASPGGRTRTKPSQGKNHRDNE-VSKSP 615
Query: 589 ETKINLAKQIDVGVVDHPNPLNANSPYIHQSKIASTPNREEMPTILPADKKKIHPQENIP 648
++I++ K+ID+ ++D PL ASTP+ + P++L +D +KI+ EN P
Sbjct: 616 RSRISMVKEIDISIMDFQKPL------------ASTPSHKGTPSVLASD-QKINSLENAP 662
Query: 649 SPVSVLDATFYHEGSSPSLKRISDSFKDGETHTSDESWNPTSLPDTPPSKASNDGNQIKA 708
SP+SVLD ++YH R+S SFKDGETH+S+E WNP SLPDTP SK S++ +QIK
Sbjct: 663 SPISVLDTSYYH-------TRLSYSFKDGETHSSEECWNPNSLPDTPQSKTSSEVSQIKP 715
Query: 709 ENMKALIQKLELLQMLSEEALKTDDTFSSVAANKDHQYLYEILSASGILHNKLNFQMMPH 768
EN +ALIQKLE LQ +++E VA KDHQY+YEIL ASG+LH +L+F MP
Sbjct: 716 ENFEALIQKLEQLQSMNDE----------VANKKDHQYIYEILLASGLLHKELSFVAMPG 765
Query: 769 QLRPSSYPINPELFLILEQAKPD---------------EEKLHRRLIFDLANELLAQQMD 813
Q PSS INPELFLILEQ KPD EKLHRR++FDL NE+ AQ+M+
Sbjct: 766 QAWPSSCLINPELFLILEQTKPDFASADQTVTKSSKANTEKLHRRIVFDLVNEITAQKMN 825
Query: 814 ANHTVNSSVQFFQSKKLSGWQLFKDLCAEIDMIQSRSSMIRCSEEE-DSR--LAEDAMQG 870
+ + + S + Q +K +GW+LFKDLC E+D +QS SS I+CSEE+ D R L ED + G
Sbjct: 826 IHCSASQSAKSLQLRKYNGWRLFKDLCTEVDRLQSESSAIKCSEEDGDERMLLVEDPLNG 885
Query: 871 MKEWKSSDSERQGIVLAIEKSIFKDLIDEIISGVDKGKVHLTQWKLRRQLSFIS 924
+++W S DSE VL IE+ I+KDLIDE+I GK+ QW L+RQLSF S
Sbjct: 886 IEDW-SFDSESPSTVLEIERLIYKDLIDEVIWDEATGKMQGGQWNLKRQLSFSS 938
>Os07g0109400 Conserved hypothetical protein
Length = 1089
Score = 244 bits (623), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 311/1097 (28%), Positives = 473/1097 (43%), Gaps = 221/1097 (20%)
Query: 1 MPSRMMQAFAQEAS-DFDRQM-GCMAGMFQIFDRRRLLTARQRGGARGTAPPGHVLPNSN 58
MP++ +Q +E + RQ GC+ G+ Q FDRR L A PP H L +S
Sbjct: 1 MPAKYLQMLGEERRPELHRQQAGCVTGILQAFDRRYPLAAHHSHNR--LLPPAHALSSSP 58
Query: 59 SNVSIQNPVASNNTLDKTFSKSMTENXXX--XXXXXXXXXXXXXXXXXXXTDINRPIQQE 116
S + +S LDK SKS +N D NR QQ+
Sbjct: 59 SVGEERTRYSSQIVLDKNMSKSWIDNQRAPLTVELSQGSYSSSSCSSSSSLDGNRSGQQD 118
Query: 117 LSYINKERFAGKP----PRSSQTKSVKC----------SKTEAKTKDPHTGFRDIVKESI 162
LS ++ F KP P+ + C +K A+ P G R++VK+SI
Sbjct: 119 LSSTDRMLFPEKPFKSSPKLKSSSDSDCGVDYYLDDALAKLSAQPSYPTLGIRNLVKDSI 178
Query: 163 NRETHGMTIKTSTKESRKGLH----KDSPRPL------LISKSTDGTYVIGIDRSTGVPG 212
R+T +I+T TKE+ K H D PR L I + GT + ID S V
Sbjct: 179 YRDTRDFSIRTFTKEAEKD-HLFNCGDPPRILNEPPNSAIQEKNKGT--MDIDESLRVLA 235
Query: 213 YVH---ESSRPPRFSCDDRQLLRSVEAQDSKKPSAKLKELPRLSLDSRKESMNPCSRLKN 269
+ ES + PR S D + S E ++S ++KL+E+PRLSLD ++ S L+N
Sbjct: 236 KLRNPSESVQQPRLSYDAPRF--SCEGRES---ASKLREVPRLSLDIKE------SPLRN 284
Query: 270 SGY-IRTDDNLLD--------------VLKHQESPSHQRASSVVAKLMGLEGTTPDIHET 314
+R ++ D + QE + +R SVVAKLMGLE T
Sbjct: 285 REIDVRPKPSMTDEDRRSSISKDYSPPLETQQEHNACKRLPSVVAKLMGLEDLPEHKDNT 344
Query: 315 ARSPTPVHGT--QIDQPSHCQ--RIKNQDHSVP-VQKNHSPVLKTNPSPRIIPEAAPWRQ 369
A S + ++P+ + + +Q+ + P Q+N +K P+ + E APW+Q
Sbjct: 345 AISSQVSKSVTERSEEPTMLRPLSLSSQNEATPRQQRNLDATIKNVPNSKFPVETAPWKQ 404
Query: 370 NERAVTGR--------AAEVKPRTASIYADIQRRLRGLELSECNKELRALR-ILSTLH-- 418
E+ V R A + AS+Y++I++RL+ L+ + NK+LRAL+ IL ++
Sbjct: 405 QEKIVLPRKLPKGSKGAHGKEQHAASVYSEIEKRLKDLDFQQSNKDLRALKQILDSMQAK 464
Query: 419 ------KKDGPSQ-------------SDNNPEL--TAIQKKA---------SEQIVDSEN 448
K++ PS +D N L T+ K+A E +
Sbjct: 465 GLLQNKKREEPSMPKIYDGDHDNGDVTDVNLRLNSTSNTKQAPEGTPSFTTEEDSTTERS 524
Query: 449 FQSPIVIMKPARC--ITKPDASDTLVAPLSRPKGIRRLRHEETSFTRKNEN--------- 497
F+SPIVIMKPA+ + D+ V PL + +LR ++ RK+
Sbjct: 525 FKSPIVIMKPAKSADLLSDVTEDSAVGPLGGLSELPQLRTANSADKRKSSKKVTREAVEQ 584
Query: 498 ---------------SDSKRNHSPNE----------------SAHSSGEEPVNXXXXXXX 526
S KR + NE SA + N
Sbjct: 585 HTKSSSRAPTPQHLASFDKRANGRNEEISRKQKSTSQLMTENSARRQQMQRENNGSLLKH 644
Query: 527 XXXXXXXXXQKKADSERRSRPPVLPTSPGKKSKETV--------SPRGRLRSRHSQTKS- 577
QKK DSERR+RPP+ K +++V SPR + R + +Q +
Sbjct: 645 KNSTSPRVQQKKPDSERRARPPIPSPDSSKNQRQSVERSHLDSVSPRSKFRRKPAQAQGE 704
Query: 578 --------------NSDNDNVLHIPETKINLAKQIDVGVVDHPNPLNANSPYI-HQSKIA 622
N + +++ + I++A ++DV V N H ++
Sbjct: 705 DFHQNGVSRRTRSLNQEGNDMSARSDGSISVASELDVEVTSTDRSAEVNILRSQHGTQTP 764
Query: 623 STPNREEMPTILPADKK--KIHPQENI---PSPVSVLDATFYHEGSSPSLKRISDSFKDG 677
S N +++ T A+K + P I PSPVSVLD++F E + K + S D
Sbjct: 765 SGRNPQKVKTSYDANKDLPSMDPAATITERPSPVSVLDSSFDQEEFFHTSKTTNSSNVDD 824
Query: 678 ETHTS--DESWNP-----TSLPDTPPSKASNDGNQIKAENMKALIQKLELLQMLSEEALK 730
E H S +ES P T LP P + K N+ +L++KL+ L + +EA
Sbjct: 825 EHHPSPSEESCKPSEKKSTELPTQPKNS--------KLANIASLLKKLQQLSVNKDEAPP 876
Query: 731 TDD-TFSSVAANKDHQYLYEILSASGILHNKLNFQMMPHQLRPSSYPINPELFLILEQ-- 787
D F + DH+Y+ EIL ASG+L L + QL S YPINP+LF +LEQ
Sbjct: 877 VDHIAFLCETPSPDHRYVSEILLASGLLMKDLGSGLSQMQLHTSGYPINPDLFFVLEQRK 936
Query: 788 ----------------AKPDEEK-LHRRLIFDLANELLAQQMDANHTVNSSVQFFQSKKL 830
KPD+ K HR+L+F+ NELL + + T+ + V
Sbjct: 937 SGWTSKPEGIHQSRSTTKPDDPKRAHRKLMFEAVNELLLDKFEKETTLITGVAARDPVMS 996
Query: 831 SGWQLFKDLCAEIDMIQSRSSMIRCSEEEDSRLAEDA--MQGMKEWKSSDSERQ--GIVL 886
SG QL K +C+ I+ +++ S + C +EDS + DA + ++ W S R+ G+VL
Sbjct: 997 SGQQLVKMICSGIECLKTERSRM-C--QEDSSVIPDAEILNRLEGWSPSFIRRELPGMVL 1053
Query: 887 AIEKSIFKDLIDEIISG 903
IE+SIFK+L+DE++ G
Sbjct: 1054 EIERSIFKELVDEVVRG 1070
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.312 0.127 0.360
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 31,356,701
Number of extensions: 1352522
Number of successful extensions: 3318
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 3284
Number of HSP's successfully gapped: 4
Length of query: 925
Length of database: 17,035,801
Length adjustment: 110
Effective length of query: 815
Effective length of database: 11,292,261
Effective search space: 9203192715
Effective search space used: 9203192715
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 161 (66.6 bits)