Os03g0418700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0418700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 93.42 | 0.454 | 3.87 | -0.186 | 0.135 | 2.05 | -1.03 | 4.39 | -0.0211 | 1.99 | 0.5816 | 1518 | -- | -- |
| 98.14 | 0.461 | 3.81 | 0.184 | 0.00851 | 1.34 | -0.361 | -- | 0.0418 | 2.3 | 1.726 | 1606 | -- | -- |
| 95.73 | 0.456 | 3.88 | -0.233 | 0.378 | 1.94 | -- | 4.47 | -0.0508 | 1.37 | 0.6204 | 1464 | -- | -- |
| 98.34 | 0.462 | 3.8 | 0.193 | 0.134 | 1.23 | -- | -- | 0.0609 | 23.9 | 1.871 | 1568 | -- | -- |
| 98.13 | 0.461 | 3.85 | -0.0638 | -- | 2.18 | -- | 4.11 | 0.0197 | -- | 0.6262 | 1518 | -- | -- |
| 110.29 | 0.492 | 3.84 | -0.0317 | 0.458 | -- | -0.328 | -- | -0.0964 | 0.691 | -- | -- | -- | -- |
| 110.73 | 0.493 | 3.84 | -0.0189 | 0.458 | -- | -- | -- | -0.0944 | 0.531 | -- | -- | -- | -- |
| 98.69 | 0.463 | 3.8 | 0.207 | -- | 1.36 | -- | -- | 0.056 | -- | 1.81 | 1599 | -- | -- |
| 99.23 | 0.464 | 3.81 | -- | 0.124 | 1.16 | -- | -- | 0.017 | 23.1 | 1.939 | 1590 | -- | -- |
| 123.91 | 0.52 | 3.83 | -0.00299 | -- | -- | -- | -- | -0.0866 | -- | -- | -- | -- | -- |
| 110.73 | 0.492 | 3.84 | -- | 0.458 | -- | -- | -- | -0.0923 | 0.529 | -- | -- | -- | -- |
| 99.69 | 0.465 | 3.81 | -- | -- | 1.28 | -- | -- | 0.0238 | -- | 1.916 | 1610 | -- | -- |
| 123.91 | 0.52 | 3.83 | -- | -- | -- | -- | -- | -0.0863 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 94.14 | humidity | 90 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 3 | 95.25 | radiation | 1 | 1440 | < th | dose dependent | rect. | 17 | 23 |
| 6 | 95.46 | radiation | 1 | 1440 | < th | dose dependent | sin | 1 | NA |
| 10 | 95.68 | radiation | 1 | 1440 | < th | dose dependent | rect. | 24 | 19 |
| 11 | 95.68 | radiation | 1 | 1440 | < th | dose dependent | rect. | 22 | 21 |
| 14 | 95.69 | radiation | 1 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 18 | 95.70 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 20 | 95.71 | radiation | 1 | 1440 | < th | dose dependent | no | NA | NA |
| 23 | 95.71 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 26 | 95.72 | radiation | 1 | 1440 | < th | dose dependent | rect. | 2 | 23 |
| 46 | 95.75 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 23 |
| 55 | 95.77 | radiation | 1 | 1440 | < th | dose independent | rect. | 17 | 22 |
| 93 | 96.08 | wind | 7 | 43200 | > th | dose dependent | rect. | 10 | 5 |
| 101 | 96.16 | wind | 9 | 43200 | < th | dose independent | rect. | 10 | 5 |
| 105 | 96.17 | radiation | 1 | 1440 | > th | dose independent | rect. | 17 | 22 |
| 106 | 96.18 | wind | 9 | 43200 | > th | dose independent | rect. | 10 | 5 |
| 126 | 96.31 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 16 |
| 148 | 96.47 | humidity | 90 | 1440 | > th | dose independent | rect. | 20 | 1 |
| 155 | 96.53 | wind | 9 | 43200 | < th | dose independent | rect. | 4 | 11 |
| 163 | 96.58 | wind | 9 | 43200 | < th | dose independent | rect. | 24 | 15 |
| 164 | 96.59 | radiation | 1 | 1440 | < th | dose dependent | sin | 12 | NA |
| 175 | 96.64 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 202 | 96.76 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 4 |
| 205 | 96.78 | wind | 7 | 43200 | > th | dose dependent | rect. | 3 | 12 |
| 211 | 96.82 | wind | 7 | 43200 | > th | dose dependent | rect. | 24 | 15 |
| 223 | 96.87 | wind | 1 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 241 | 96.96 | wind | 9 | 43200 | > th | dose independent | rect. | 24 | 15 |
| 242 | 96.99 | wind | 9 | 43200 | > th | dose independent | rect. | 3 | 12 |
| 256 | 97.06 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 20 |
| 264 | 97.11 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 20 |
| 271 | 97.15 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 7 |
| 275 | 97.17 | wind | 9 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 282 | 97.20 | radiation | 1 | 1440 | < th | dose independent | rect. | 17 | 17 |
| 289 | 97.23 | temperature | 25 | 1440 | > th | dose dependent | rect. | 14 | 1 |
| 291 | 97.24 | humidity | 90 | 43200 | > th | dose dependent | rect. | 22 | 2 |
| 295 | 97.25 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 19 |
| 297 | 97.26 | humidity | 90 | 43200 | > th | dose independent | rect. | 20 | 7 |
| 299 | 97.26 | humidity | 90 | 720 | > th | dose dependent | rect. | 6 | 17 |
| 311 | 97.30 | humidity | 90 | 43200 | > th | dose independent | rect. | 19 | 11 |
| 314 | 97.31 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 3 |
| 327 | 97.33 | humidity | 90 | 43200 | < th | dose independent | rect. | 19 | 8 |
| 341 | 97.36 | humidity | 80 | 1440 | > th | dose independent | rect. | 18 | 1 |
| 353 | 97.38 | temperature | 25 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 358 | 97.39 | humidity | 80 | 1440 | < th | dose independent | rect. | 18 | 1 |
| 363 | 97.39 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 21 |
| 368 | 97.40 | humidity | 90 | 1440 | < th | dose independent | rect. | 20 | 1 |
| 387 | 97.41 | humidity | 90 | 43200 | < th | dose independent | rect. | 18 | 10 |
| 405 | 97.44 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 422 | 97.45 | wind | 7 | 43200 | > th | dose dependent | rect. | 12 | 3 |
| 434 | 97.46 | radiation | 1 | 1440 | < th | dose independent | rect. | 24 | 19 |
| 436 | 97.46 | radiation | 1 | 1440 | < th | dose independent | rect. | 22 | 21 |
| 446 | 97.47 | radiation | 1 | 1440 | < th | dose independent | rect. | 24 | 23 |
| 455 | 97.48 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 5 |
| 457 | 97.48 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 14 |
| 467 | 97.49 | radiation | 1 | 1440 | < th | dose independent | no | NA | NA |
| 484 | 97.50 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 18 |
| 488 | 97.50 | radiation | 1 | 1440 | < th | dose independent | rect. | 2 | 23 |
| 510 | 97.51 | temperature | 25 | 1440 | > th | dose dependent | sin | 17 | NA |
| 557 | 97.54 | radiation | 1 | 1440 | > th | dose independent | rect. | 17 | 17 |
| 564 | 97.54 | wind | 1 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 565 | 97.54 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 8 |
| 591 | 97.57 | radiation | 1 | 1440 | < th | dose independent | sin | 12 | NA |
| 610 | 97.59 | humidity | 50 | 1440 | > th | dose dependent | rect. | 18 | 4 |
| 628 | 97.61 | humidity | 80 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 649 | 97.63 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 2 |
| 655 | 97.63 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 22 |
| 656 | 97.63 | radiation | 1 | 1440 | < th | dose independent | rect. | 7 | 23 |
| 671 | 97.64 | radiation | 1 | 14400 | < th | dose dependent | rect. | 1 | 4 |
| 690 | 97.66 | atmosphere | 1015 | 270 | < th | dose dependent | rect. | 19 | 7 |
| 735 | 97.70 | radiation | 1 | 1440 | > th | dose independent | rect. | 5 | 14 |
| 750 | 97.71 | humidity | 90 | 43200 | > th | dose independent | sin | 12 | NA |
| 768 | 97.73 | radiation | 1 | 1440 | > th | dose independent | no | NA | NA |
| 769 | 97.73 | temperature | 25 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 770 | 97.73 | temperature | 25 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 866 | 97.78 | humidity | 50 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 887 | 97.81 | radiation | 40 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 898 | 97.82 | humidity | 90 | 43200 | < th | dose independent | sin | 12 | NA |
| 901 | 97.82 | radiation | 1 | 1440 | > th | dose independent | rect. | 7 | 23 |
| 908 | 97.82 | temperature | 25 | 1440 | > th | dose dependent | rect. | 5 | 17 |
| 909 | 97.82 | temperature | 25 | 1440 | > th | dose dependent | rect. | 3 | 18 |
| 917 | 97.83 | radiation | 1 | 1440 | < th | dose independent | sin | 1 | NA |
| 945 | 97.85 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 2 |
| 956 | 97.86 | wind | 1 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 960 | 97.86 | temperature | 10 | 270 | > th | dose dependent | rect. | 1 | 8 |
| 965 | 97.87 | radiation | 1 | 1440 | > th | dose independent | sin | 12 | NA |
| 976 | 97.88 | temperature | 25 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 983 | 97.88 | wind | 1 | 43200 | < th | dose dependent | rect. | 20 | 8 |
| 994 | 97.89 | wind | 9 | 43200 | > th | dose independent | rect. | 13 | 2 |