BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0411800 Os03g0411800|AK121551
         (358 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os03g0411800  Similar to Metal transport protein                  518   e-147
Os01g0972200  Similar to Zinc transporter 2 precursor (ZRT/I...   302   2e-82
Os08g0533900                                                       78   1e-14

>Os03g0411800 Similar to Metal transport protein
          Length = 358

 Score =  518 bits (1334), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 274/358 (76%), Positives = 274/358 (76%)

Query: 1   MAGGRGARASLHLHLAWLCAFATTXXXXXXXXXXXXXXXXXXXXXXXKPDLRARGLVAAK 60
           MAGGRGARASLHLHLAWLCAFATT                       KPDLRARGLVAAK
Sbjct: 1   MAGGRGARASLHLHLAWLCAFATTAWAHGGGGGGGDSDADADGGGEGKPDLRARGLVAAK 60

Query: 61  LWCLAVVFAGTLAGGVSPYFMRWNDAFLALGTQFAGGVFLGTAMMHFLADANETFADLLP 120
           LWCLAVVFAGTLAGGVSPYFMRWNDAFLALGTQFAGGVFLGTAMMHFLADANETFADLLP
Sbjct: 61  LWCLAVVFAGTLAGGVSPYFMRWNDAFLALGTQFAGGVFLGTAMMHFLADANETFADLLP 120

Query: 121 GTAYPFAFMLACAGYVLTMLADCAISFVVXXXXXXXXXXXXXXXXXXXXKLSSTNGNXXX 180
           GTAYPFAFMLACAGYVLTMLADCAISFVV                    KLSSTNGN   
Sbjct: 121 GTAYPFAFMLACAGYVLTMLADCAISFVVARGGGRTEPAAAAGAGLEEGKLSSTNGNASD 180

Query: 181 XXXXXXXXXXXXXXXMLRNASTLGDSVLLIAALCFHSVFEGIAIGVAETKADAWKALWTI 240
                          MLRNASTLGDSVLLIAALCFHSVFEGIAIGVAETKADAWKALWTI
Sbjct: 181 PPAADAAAQDHSVASMLRNASTLGDSVLLIAALCFHSVFEGIAIGVAETKADAWKALWTI 240

Query: 241 SLHKIFAAIAMGIALLRMLPDRPFLSCFGYAFAFAVSSPXXXXXXXXXDATTQGRVADWI 300
           SLHKIFAAIAMGIALLRMLPDRPFLSCFGYAFAFAVSSP         DATTQGRVADWI
Sbjct: 241 SLHKIFAAIAMGIALLRMLPDRPFLSCFGYAFAFAVSSPVGVGIGIVIDATTQGRVADWI 300

Query: 301 FAVSMGLATGIFIYVSINHLLSKGYTPLRPVAADTPAGRXXXXXXXXXXXXXXMIWDT 358
           FAVSMGLATGIFIYVSINHLLSKGYTPLRPVAADTPAGR              MIWDT
Sbjct: 301 FAVSMGLATGIFIYVSINHLLSKGYTPLRPVAADTPAGRLLAVVLGVAVIAVVMIWDT 358



>Os01g0972200 Similar to Zinc transporter 2 precursor (ZRT/IRT-like protein 2)
          Length = 352

 Score =  302 bits (774), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 155/307 (50%), Positives = 190/307 (61%), Gaps = 6/307 (1%)

Query: 51  LRARGLVAAKLWCLAVVFAGTLAGGVSPYFMRWNDAFLALGTQFAGGVFLGTAMMHFLAD 110
           +R++GL+A K+WCL ++   T AGGVSPYF RWN++FL LGTQFA GVFLGTA+MHFLAD
Sbjct: 52  VRSKGLIAVKVWCLVILLVFTFAGGVSPYFYRWNESFLLLGTQFAAGVFLGTALMHFLAD 111

Query: 111 ANETFADLLPGTAYPFAFMLACAGYVLTMLADCAISFVVXXXXXXXXXXXXXXXXXXXXK 170
           +  TF  L     YPF+FML C G++LTML+D  I+                       +
Sbjct: 112 STSTFKGLTT-NQYPFSFMLTCVGFLLTMLSDLVIA-----AVARRSAAAGVSDNQVSEQ 165

Query: 171 LSSTNGNXXXXXXXXXXXXXXXXXXMLRNASTLGDSVLLIAALCFHSVFEGIAIGVAETK 230
                                    ML   S+  D+VLLI ALCFHSVFEGIAIGV+ +K
Sbjct: 166 QQRQQAEGAVMSRKEEEAAAVAHPAMLVRTSSFEDAVLLIVALCFHSVFEGIAIGVSASK 225

Query: 231 ADAWKALWTISLHKIFAAIAMGIALLRMLPDRPFLSCFGYAFAFAVSSPXXXXXXXXXDA 290
           ++AW+ LWTI LHKIFAA+AMGIALLRM+P RPFL    Y+ AFAVSSP         DA
Sbjct: 226 SEAWRNLWTIGLHKIFAAVAMGIALLRMIPKRPFLMTVVYSLAFAVSSPVGVGIGIAIDA 285

Query: 291 TTQGRVADWIFAVSMGLATGIFIYVSINHLLSKGYTPLRPVAADTPAGRXXXXXXXXXXX 350
           T+QGR ADW +A+SMGLATG+FIYV+INHL++KGY P  P AAD P  +           
Sbjct: 286 TSQGRAADWTYAISMGLATGVFIYVAINHLIAKGYRPHHPTAADKPLFKFLAVLLGVAVM 345

Query: 351 XXXMIWD 357
              MIWD
Sbjct: 346 AVVMIWD 352



>Os08g0533900 
          Length = 172

 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 38/60 (63%), Positives = 45/60 (75%), Gaps = 1/60 (1%)

Query: 86  AFLALGTQFAGGVFLGTAMMHFLADANETFADLLPGTAYPFAFMLACAGYVLTMLADCAI 145
           +FL LGTQFA GVFLGTA+MHFLAD+  TF  L     YPF+FML C G++LTML+D  I
Sbjct: 62  SFLLLGTQFAAGVFLGTALMHFLADSTSTFKGLTT-NQYPFSFMLTCVGFLLTMLSDLVI 120



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.328    0.138    0.441 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,942,331
Number of extensions: 280022
Number of successful extensions: 738
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 731
Number of HSP's successfully gapped: 4
Length of query: 358
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 256
Effective length of database: 11,709,973
Effective search space: 2997753088
Effective search space used: 2997753088
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 157 (65.1 bits)