Os03g0411800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Metal transport protein.
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Os03g0411800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Metal transport protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 206.66 | 0.675 | 12.3 | 2.63 | 1.21 | 0.972 | -1.04 | -1.6 | 0.681 | 23.8 | 20.1 | 2668 | -- | -- |
| 209.73 | 0.674 | 12.3 | 2.87 | 1.22 | 1.4 | -1.3 | -- | 0.71 | 23.8 | 19.49 | 2617 | -- | -- |
| 211.15 | 0.677 | 12.3 | 2.63 | 1.22 | 0.976 | -- | -1.72 | 0.673 | 23.6 | 20.09 | 2643 | -- | -- |
| 210.61 | 0.676 | 12.3 | 2.92 | 1.19 | 1.64 | -- | -- | 0.783 | 23.6 | 18.37 | 2532 | -- | -- |
| 297.8 | 0.804 | 12.3 | 2.84 | -- | 1.11 | -- | -1.61 | 0.738 | -- | 20.3 | 948 | -- | -- |
| 242.44 | 0.73 | 12.2 | 3.56 | 1.27 | -- | -1.2 | -- | 1.05 | 23.9 | -- | -- | -- | -- |
| 248.58 | 0.738 | 12.2 | 3.61 | 1.27 | -- | -- | -- | 1.06 | 23.8 | -- | -- | -- | -- |
| 295.69 | 0.801 | 12.3 | 2.75 | -- | 1.95 | -- | -- | 0.705 | -- | 18.4 | 2379 | -- | -- |
| 238.96 | 0.72 | 12.5 | -- | 1.23 | 3.05 | -- | -- | -0.0339 | 23.7 | 18.01 | 47520 | -- | -- |
| 350.46 | 0.875 | 12.2 | 3.65 | -- | -- | -- | -- | 1.08 | -- | -- | -- | -- | -- |
| 591.85 | 1.14 | 12.3 | -- | 1.32 | -- | -- | -- | 0.659 | 23.9 | -- | -- | -- | -- |
| 334.47 | 0.852 | 12.4 | -- | -- | 3.07 | -- | -- | -0.0442 | -- | 18.21 | 47520 | -- | -- |
| 701.16 | 1.24 | 12.3 | -- | -- | -- | -- | -- | 0.672 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 202.22 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 2 | 202.64 | wind | 1.0 | 14400 | < th | dose independent | rect. | 23 | 3 |
| 3 | 202.86 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 16 | 3 |
| 4 | 203.11 | wind | 1.0 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 8 | 204.30 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 20 | 2 |
| 11 | 204.87 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 15 | 205.44 | wind | 7.0 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 16 | 205.44 | wind | 9.0 | 43200 | < th | dose independent | rect. | 16 | 3 |
| 17 | 205.45 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 19 | 205.60 | wind | 9.0 | 43200 | > th | dose independent | rect. | 16 | 4 |
| 24 | 206.00 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 22 | 9 |
| 25 | 206.03 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 3 |
| 27 | 206.07 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 22 | 3 |
| 31 | 206.14 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 22 | 5 |
| 33 | 206.21 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 21 | 7 |
| 37 | 206.33 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 43 | 206.49 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 21 | 10 |
| 45 | 206.51 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 21 | 6 |
| 47 | 206.54 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 48 | 206.55 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 55 | 206.68 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 67 | 206.87 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 87 | 207.11 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 11 | 19 |
| 93 | 207.14 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 21 | 17 |
| 94 | 207.14 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 106 | 207.25 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 123 | 207.38 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 18 | 19 |
| 145 | 207.64 | atmosphere | 995.0 | 43200 | < th | dose independent | sin | 7 | NA |
| 148 | 207.68 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 21 | 16 |
| 162 | 207.76 | atmosphere | 995.0 | 43200 | > th | dose independent | sin | 6 | NA |
| 220 | 208.25 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 23 | 13 |
| 227 | 208.32 | atmosphere | 995.0 | 43200 | < th | dose dependent | sin | 9 | NA |
| 233 | 208.37 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 237 | 208.40 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 12 | 15 |
| 238 | 208.41 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 242 | 208.45 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 1 | 10 |
| 255 | 208.52 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 23 | 9 |
| 256 | 208.52 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 16 | 16 |
| 261 | 208.56 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 24 | 11 |
| 271 | 208.63 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 23 | 9 |
| 282 | 208.71 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 290 | 208.77 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 293 | 208.83 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 2 | 8 |
| 297 | 208.84 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 309 | 208.94 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 1 | 8 |
| 313 | 208.98 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 2 | 8 |
| 316 | 209.01 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 320 | 209.03 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 1 | 7 |
| 323 | 209.10 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 1 | 7 |
| 325 | 209.13 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 4 | 5 |
| 326 | 209.14 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 331 | 209.14 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 1 | 7 |
| 332 | 209.14 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 4 | 12 |
| 333 | 209.15 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 346 | 209.21 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 20 | 13 |
| 348 | 209.22 | temperature | 20.0 | 1440 | < th | dose independent | sin | 10 | NA |
| 359 | 209.28 | temperature | 20.0 | 1440 | > th | dose independent | sin | 10 | NA |
| 369 | 209.33 | atmosphere | 1015.0 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 409 | 209.55 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 20 | 13 |
| 410 | 209.55 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 12 | 3 |
| 420 | 209.61 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 2 | 6 |
| 433 | 209.68 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 16 | 18 |
| 436 | 209.71 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 16 | 16 |
| 447 | 209.76 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 450 | 209.78 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 2 | NA |
| 475 | 209.91 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 478 | 209.92 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 21 | 13 |
| 510 | 210.10 | atmosphere | 1015.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 518 | 210.13 | atmosphere | 1015.0 | 43200 | > th | dose independent | rect. | 15 | 9 |
| 530 | 210.17 | atmosphere | 995.0 | 43200 | < th | dose dependent | sin | 16 | NA |
| 538 | 210.20 | atmosphere | 1015.0 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 540 | 210.20 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 552 | 210.25 | atmosphere | 1015.0 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 559 | 210.26 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 13 | 4 |
| 570 | 210.29 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 608 | 210.43 | atmosphere | 1015.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 619 | 210.45 | atmosphere | 1015.0 | 43200 | < th | dose independent | rect. | 15 | 9 |
| 624 | 210.46 | atmosphere | 1015.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 640 | 210.49 | atmosphere | 1015.0 | 43200 | < th | dose independent | rect. | 3 | 5 |
| 642 | 210.49 | atmosphere | 1015.0 | 43200 | < th | dose independent | rect. | 15 | 17 |
| 656 | 210.52 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 677 | 210.54 | atmosphere | 1015.0 | 43200 | > th | dose independent | rect. | 15 | 17 |
| 698 | 210.56 | atmosphere | 1015.0 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 716 | 210.58 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 21 | 11 |
| 724 | 210.59 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 23 | 17 |
| 738 | 210.61 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 4 | 4 |
| 777 | 210.65 | atmosphere | 1015.0 | 43200 | > th | dose independent | sin | 14 | NA |
| 790 | 210.66 | atmosphere | 1015.0 | 43200 | < th | dose independent | sin | 13 | NA |
| 792 | 210.66 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 2 | 6 |
| 802 | 210.67 | atmosphere | 1015.0 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 805 | 210.67 | wind | 9.0 | 43200 | > th | dose independent | rect. | 8 | 11 |
| 806 | 210.67 | atmosphere | 1015.0 | 43200 | > th | dose dependent | sin | 13 | NA |
| 861 | 210.72 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 24 | 8 |
| 888 | 210.74 | atmosphere | 1015.0 | 43200 | < th | dose independent | rect. | 22 | 10 |