BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0323200 Os03g0323200|AK067323
         (1125 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os03g0323200  Similar to Protoporphyrin IX Mg-chelatase subu...  2202   0.0  
Os07g0656500  Similar to Mg-chelatase subunit chlH (Fragment)    1377   0.0  

>Os03g0323200 Similar to Protoporphyrin IX Mg-chelatase subunit precursor
          Length = 1125

 Score = 2202 bits (5705), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1073/1112 (96%), Positives = 1073/1112 (96%)

Query: 14   SWGRPCRSTRSCFLDAGIWHPLAPTMYDDVKEYLNWYGTRRDTNDKLKDPNAPVIGLVLQ 73
            SWGRPCRSTRSCFLDAGIWHPLAPTMYDDVKEYLNWYGTRRDTNDKLKDPNAPVIGLVLQ
Sbjct: 14   SWGRPCRSTRSCFLDAGIWHPLAPTMYDDVKEYLNWYGTRRDTNDKLKDPNAPVIGLVLQ 73

Query: 74   RSHIVTGDDGHYVAVIMELEAKGAKVIPIFAGGLDFSGPTQRYLVDPITGKPFVNAVVSL 133
            RSHIVTGDDGHYVAVIMELEAKGAKVIPIFAGGLDFSGPTQRYLVDPITGKPFVNAVVSL
Sbjct: 74   RSHIVTGDDGHYVAVIMELEAKGAKVIPIFAGGLDFSGPTQRYLVDPITGKPFVNAVVSL 133

Query: 134  TGFALVGGPARQDHPKAIAALQKLDVPYIVALPLVFQTTEEWLNSTLGLHPIQVALQVAL 193
            TGFALVGGPARQDHPKAIAALQKLDVPYIVALPLVFQTTEEWLNSTLGLHPIQVALQVAL
Sbjct: 134  TGFALVGGPARQDHPKAIAALQKLDVPYIVALPLVFQTTEEWLNSTLGLHPIQVALQVAL 193

Query: 194  PELDGGMEPIVFAGRDPRTGKSHALHKRVEQLCTRAIRWAXXXXXXXXXXXXAITVFSFP 253
            PELDGGMEPIVFAGRDPRTGKSHALHKRVEQLCTRAIRWA            AITVFSFP
Sbjct: 194  PELDGGMEPIVFAGRDPRTGKSHALHKRVEQLCTRAIRWAELKRKTKEEKKLAITVFSFP 253

Query: 254  PDKGNVGTAAYLNVFNSIYSVLQDLKKDGYNVEGLPDTAEALIEEVIHDKEAQFNSPNLN 313
            PDKGNVGTAAYLNVFNSIYSVLQDLKKDGYNVEGLPDTAEALIEEVIHDKEAQFNSPNLN
Sbjct: 254  PDKGNVGTAAYLNVFNSIYSVLQDLKKDGYNVEGLPDTAEALIEEVIHDKEAQFNSPNLN 313

Query: 314  VAYRMNVREYQSLTSYASLLEENWGKPPGNLNSDGENLLVYGKQYGNVFIGVQPTFGYEG 373
            VAYRMNVREYQSLTSYASLLEENWGKPPGNLNSDGENLLVYGKQYGNVFIGVQPTFGYEG
Sbjct: 314  VAYRMNVREYQSLTSYASLLEENWGKPPGNLNSDGENLLVYGKQYGNVFIGVQPTFGYEG 373

Query: 374  DPMRLLFSKSASPHHGFAAYYTFVEKIFQADAVLHFGTHGSLEFMPGKQVGMSDACYPDS 433
            DPMRLLFSKSASPHHGFAAYYTFVEKIFQADAVLHFGTHGSLEFMPGKQVGMSDACYPDS
Sbjct: 374  DPMRLLFSKSASPHHGFAAYYTFVEKIFQADAVLHFGTHGSLEFMPGKQVGMSDACYPDS 433

Query: 434  LIGXXXXXXXXXXXXXSEATVAKRRSYANTISYLTPPAENAGLYKGLKQLSELISSYQSL 493
            LIG             SEATVAKRRSYANTISYLTPPAENAGLYKGLKQLSELISSYQSL
Sbjct: 434  LIGNIPNIYYYAANNPSEATVAKRRSYANTISYLTPPAENAGLYKGLKQLSELISSYQSL 493

Query: 494  KDTGRGPQIVSSIISTAKQCNLDKDXXXXXXXXXXXXXXRDLIVGKVYAKIMEIESRLLP 553
            KDTGRGPQIVSSIISTAKQCNLDKD              RDLIVGKVYAKIMEIESRLLP
Sbjct: 494  KDTGRGPQIVSSIISTAKQCNLDKDVPLPEEGVELPPNERDLIVGKVYAKIMEIESRLLP 553

Query: 554  CGLHVIGEPPSAIEAVATLVNIASLDRPEDEIYSLPNILAQTVGRNIEDVYRGSDKGILA 613
            CGLHVIGEPPSAIEAVATLVNIASLDRPEDEIYSLPNILAQTVGRNIEDVYRGSDKGILA
Sbjct: 554  CGLHVIGEPPSAIEAVATLVNIASLDRPEDEIYSLPNILAQTVGRNIEDVYRGSDKGILA 613

Query: 614  DVELLRQITEASRGAITTFVERTTNNKGQVVDVTNKLSTMLGFGLSEPWVQHLSKTKFIR 673
            DVELLRQITEASRGAITTFVERTTNNKGQVVDVTNKLSTMLGFGLSEPWVQHLSKTKFIR
Sbjct: 614  DVELLRQITEASRGAITTFVERTTNNKGQVVDVTNKLSTMLGFGLSEPWVQHLSKTKFIR 673

Query: 674  ADREKLRTLFTFLGECLKLIVADNELGSLKLALEGSYVEPGPGGDPIRNPKVLPTGKNIH 733
            ADREKLRTLFTFLGECLKLIVADNELGSLKLALEGSYVEPGPGGDPIRNPKVLPTGKNIH
Sbjct: 674  ADREKLRTLFTFLGECLKLIVADNELGSLKLALEGSYVEPGPGGDPIRNPKVLPTGKNIH 733

Query: 734  ALDPQAIPTTAALKSAKIIVDRLLERQKVDNGGKYPETIALVLWGTDNIKTYGESLAQVL 793
            ALDPQAIPTTAALKSAKIIVDRLLERQKVDNGGKYPETIALVLWGTDNIKTYGESLAQVL
Sbjct: 734  ALDPQAIPTTAALKSAKIIVDRLLERQKVDNGGKYPETIALVLWGTDNIKTYGESLAQVL 793

Query: 794  WMIGVRPVADTFGRVNRVEPVSLEELGRPRIDVVINCSGVFRDLFINQMNLLDRAVKMVA 853
            WMIGVRPVADTFGRVNRVEPVSLEELGRPRIDVVINCSGVFRDLFINQMNLLDRAVKMVA
Sbjct: 794  WMIGVRPVADTFGRVNRVEPVSLEELGRPRIDVVINCSGVFRDLFINQMNLLDRAVKMVA 853

Query: 854  ELDEPEEMNYVRKHAQEQARELGVSLREAATRVFSNASGSYSSNVNLAVENASWTDEKQL 913
            ELDEPEEMNYVRKHAQEQARELGVSLREAATRVFSNASGSYSSNVNLAVENASWTDEKQL
Sbjct: 854  ELDEPEEMNYVRKHAQEQARELGVSLREAATRVFSNASGSYSSNVNLAVENASWTDEKQL 913

Query: 914  QDMYLSRKSFAFDCDAPGAGMREQRKTFELALATADATFQNLDSSEISLTDVSHYFDSDP 973
            QDMYLSRKSFAFDCDAPGAGMREQRKTFELALATADATFQNLDSSEISLTDVSHYFDSDP
Sbjct: 914  QDMYLSRKSFAFDCDAPGAGMREQRKTFELALATADATFQNLDSSEISLTDVSHYFDSDP 973

Query: 974  TKLVQGLRKDGRAPSSYIADTTTANAQVRTLSETVRLDARTKLLNPKWYEGMMKSGYEGV 1033
            TKLVQGLRKDGRAPSSYIADTTTANAQVRTLSETVRLDARTKLLNPKWYEGMMKSGYEGV
Sbjct: 974  TKLVQGLRKDGRAPSSYIADTTTANAQVRTLSETVRLDARTKLLNPKWYEGMMKSGYEGV 1033

Query: 1034 REIEKRLTNTVGWSATSGQVDNWVYEEANATFIEDEAMRKRLMDTNPNSFRKLVQTFLEA 1093
            REIEKRLTNTVGWSATSGQVDNWVYEEANATFIEDEAMRKRLMDTNPNSFRKLVQTFLEA
Sbjct: 1034 REIEKRLTNTVGWSATSGQVDNWVYEEANATFIEDEAMRKRLMDTNPNSFRKLVQTFLEA 1093

Query: 1094 SGRGYWETSEENLEKLRELYSEVEDKIEGIDR 1125
            SGRGYWETSEENLEKLRELYSEVEDKIEGIDR
Sbjct: 1094 SGRGYWETSEENLEKLRELYSEVEDKIEGIDR 1125



>Os07g0656500 Similar to Mg-chelatase subunit chlH (Fragment)
          Length = 782

 Score = 1377 bits (3563), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 696/807 (86%), Positives = 711/807 (88%), Gaps = 37/807 (4%)

Query: 291  TAEALIEEVIHDKEAQFNSPNLNVAYRMNVREYQSLTSYASLLEENWGKPPGNLNSDGEN 350
            TAEALIEEVIHDKEAQFNSPNLNVAYRMNVREYQSLTSYASLLEENWGKPPGNL SDG  
Sbjct: 13   TAEALIEEVIHDKEAQFNSPNLNVAYRMNVREYQSLTSYASLLEENWGKPPGNLISDG-- 70

Query: 351  LLVYGKQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYTFVEKIFQADAVLHFG 410
                                   DPMRLLFSKSASPHHGFAAY+TFVEKIFQADAV    
Sbjct: 71   -----------------------DPMRLLFSKSASPHHGFAAYHTFVEKIFQADAV---- 103

Query: 411  THGSLEFMPGKQVGMSDACYPDSLIGXXXXXXXXXXXXXSEATVAKRRSYANTISYLTPP 470
                   +P   +G+  +C   +LIG             SEATV KRRSYANTISYLTPP
Sbjct: 104  -----TLVP---MGLLSSCQGSNLIGNIPNIYCYAANNPSEATVGKRRSYANTISYLTPP 155

Query: 471  AENAGLYKGLKQLSELISSYQSLKDTGRGPQIVSSIISTAKQCNLDKDXXXXXXXXXXXX 530
            AEN GLYKGLKQLSELISSYQSLKDTGRGPQIVSSIISTAKQ  L +             
Sbjct: 156  AENVGLYKGLKQLSELISSYQSLKDTGRGPQIVSSIISTAKQLILTRMFPLPEERMELPP 215

Query: 531  XXRDLIVGKVYAKIMEIESRLLPCGLHVIGEPPSAIEAVATLVNIASLDRPEDEIYSLPN 590
              RDLIVGKVYAKIMEIESRLLPCGLHVIGEPPSAIEAVATLVNIASLD PEDEIYSLPN
Sbjct: 216  NERDLIVGKVYAKIMEIESRLLPCGLHVIGEPPSAIEAVATLVNIASLDCPEDEIYSLPN 275

Query: 591  ILAQTVGRNIEDVYRGSDKGILADVELLRQITEASRGAITTFVERTTNNKGQVVDVTNKL 650
            ILAQTVGRNIEDVYRGSDKGILADVELLRQITEASRGAIT FVERTTN+KGQVVDVTNKL
Sbjct: 276  ILAQTVGRNIEDVYRGSDKGILADVELLRQITEASRGAITAFVERTTNSKGQVVDVTNKL 335

Query: 651  STMLGFGLSEPWVQHLSKTKFIRADREKLRTLFTFLGECLKLIVADNELGSLKLALEGSY 710
            STMLGFGLSEPWVQHLSKTKFIRADREKLRTLFTFLGECLKLIVADNELGSLKLALEGSY
Sbjct: 336  STMLGFGLSEPWVQHLSKTKFIRADREKLRTLFTFLGECLKLIVADNELGSLKLALEGSY 395

Query: 711  VEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAALKSAKIIVDRLLERQKVDNGGKYPE 770
            VEPGPGGDPI N KVLPTGK+IHALDPQ +PT AA+KSAKI+VDRLLE QKVDNGGKYPE
Sbjct: 396  VEPGPGGDPIHNLKVLPTGKSIHALDPQTMPTIAAMKSAKIVVDRLLEWQKVDNGGKYPE 455

Query: 771  TIALVLWGTDNIKTYGESLAQVLWMIGVRPVADTFGRVNRVEPVSLEELGRPRIDVVINC 830
            TIALVLWGTDNIKT GESLAQVLWMIGVR VADTFGRVNRVEPVSLEELGRPRIDVV+NC
Sbjct: 456  TIALVLWGTDNIKTNGESLAQVLWMIGVRSVADTFGRVNRVEPVSLEELGRPRIDVVVNC 515

Query: 831  SGVFRDLFINQMNLLDRAVKMVAELDEPEEMNYVRKHAQEQARELGVSLREAATRVFSNA 890
            SGVFRDLFINQ NLLDRAVKMVAELDEPEEMNYVRKHAQEQA+ELGVSLREA TRVFSNA
Sbjct: 516  SGVFRDLFINQTNLLDRAVKMVAELDEPEEMNYVRKHAQEQAQELGVSLREATTRVFSNA 575

Query: 891  SGSYSSNVNLAVENASWTDEKQLQDMYLSRKSFAFDCDAPGAGMREQRKTFELALATADA 950
            SGSYSSNVNLAVENASWTDEKQLQDMYLSRKSFAFD DAPGAGMREQRKTFELALATADA
Sbjct: 576  SGSYSSNVNLAVENASWTDEKQLQDMYLSRKSFAFDSDAPGAGMREQRKTFELALATADA 635

Query: 951  TFQNLDSSEISLTDVSHYFDSDPTKLVQGLRKDGRAPSSYIADTTTANAQVRTLSETVRL 1010
            TFQNLDSSEISLTDVSHYFDSDPTKLVQGLRKD RAPSSYIADTTTANAQVRTLSETVRL
Sbjct: 636  TFQNLDSSEISLTDVSHYFDSDPTKLVQGLRKDERAPSSYIADTTTANAQVRTLSETVRL 695

Query: 1011 DARTKLLNPKWYEGMMKSGYEGVREIEKRLTNTVGWSATSGQVDNWVYEEANATFIEDEA 1070
            DARTKLLNPKWY+GMMKSGYEGVREIEKRLT TV WSA SGQV NWVYEEANATFIEDEA
Sbjct: 696  DARTKLLNPKWYKGMMKSGYEGVREIEKRLTKTVVWSAKSGQVVNWVYEEANATFIEDEA 755

Query: 1071 MRKRLMDTNPNSFRKLVQTFLEASGRG 1097
            MRKRLMDTNPNSFRKLVQT LEASGRG
Sbjct: 756  MRKRLMDTNPNSFRKLVQTCLEASGRG 782



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.317    0.134    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 36,762,312
Number of extensions: 1538834
Number of successful extensions: 3353
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3350
Number of HSP's successfully gapped: 2
Length of query: 1125
Length of database: 17,035,801
Length adjustment: 112
Effective length of query: 1013
Effective length of database: 11,187,833
Effective search space: 11333274829
Effective search space used: 11333274829
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 161 (66.6 bits)