BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0289300 Os03g0289300|Os03g0289300
(594 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0289300 Similar to Phospholipase C (Fragment) 1240 0.0
Os07g0694000 Similar to Phospholipase C (Fragment) 827 0.0
Os05g0127200 Similar to Phospholipase C (Fragment) 600 e-171
AK072141 579 e-165
Os12g0562400 Similar to Phospholipase C (Fragment) 412 e-115
>Os03g0289300 Similar to Phospholipase C (Fragment)
Length = 594
Score = 1240 bits (3208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 594/594 (100%), Positives = 594/594 (100%)
Query: 1 MGTYKCCIFFTRRFALSDASTPGDVRMLFTRHAGGAPYMGIDELRRYLAASGEAHVDADT 60
MGTYKCCIFFTRRFALSDASTPGDVRMLFTRHAGGAPYMGIDELRRYLAASGEAHVDADT
Sbjct: 1 MGTYKCCIFFTRRFALSDASTPGDVRMLFTRHAGGAPYMGIDELRRYLAASGEAHVDADT 60
Query: 61 AERIIDRVLQERSRTPRFGKPSLTIDDFQYFLFSEDLNPPICHSKEVHHDMNAPLSHYFI 120
AERIIDRVLQERSRTPRFGKPSLTIDDFQYFLFSEDLNPPICHSKEVHHDMNAPLSHYFI
Sbjct: 61 AERIIDRVLQERSRTPRFGKPSLTIDDFQYFLFSEDLNPPICHSKEVHHDMNAPLSHYFI 120
Query: 121 YTGHNSYLTGNQLSSDCSDIPIIKALQIGVRVIELDMWPNSSKDDVDILHGRTLTAPVSL 180
YTGHNSYLTGNQLSSDCSDIPIIKALQIGVRVIELDMWPNSSKDDVDILHGRTLTAPVSL
Sbjct: 121 YTGHNSYLTGNQLSSDCSDIPIIKALQIGVRVIELDMWPNSSKDDVDILHGRTLTAPVSL 180
Query: 181 IKCLKSIKEYAFVASPYPVIITLEDHLTSDLQAKVAKMVLEVFGDTLYYPESKHLQEFPS 240
IKCLKSIKEYAFVASPYPVIITLEDHLTSDLQAKVAKMVLEVFGDTLYYPESKHLQEFPS
Sbjct: 181 IKCLKSIKEYAFVASPYPVIITLEDHLTSDLQAKVAKMVLEVFGDTLYYPESKHLQEFPS 240
Query: 241 PEALRGRVILSTKPPKEYLESKGGTMKDRDIEPQFSKGQNEEAVWGTEVPDIQDEMQTAD 300
PEALRGRVILSTKPPKEYLESKGGTMKDRDIEPQFSKGQNEEAVWGTEVPDIQDEMQTAD
Sbjct: 241 PEALRGRVILSTKPPKEYLESKGGTMKDRDIEPQFSKGQNEEAVWGTEVPDIQDEMQTAD 300
Query: 301 KQHENDILYTQRDVEEDDEKKMCQHHPLEYKHLITIKAGKPKGAVVDALKGDPDKVRRLS 360
KQHENDILYTQRDVEEDDEKKMCQHHPLEYKHLITIKAGKPKGAVVDALKGDPDKVRRLS
Sbjct: 301 KQHENDILYTQRDVEEDDEKKMCQHHPLEYKHLITIKAGKPKGAVVDALKGDPDKVRRLS 360
Query: 361 LSEQELAKVAAHHGRNIVSFTHKNLLRIYPKGTRFNSSNYNPFLGWVHGAQMVAFNMQGY 420
LSEQELAKVAAHHGRNIVSFTHKNLLRIYPKGTRFNSSNYNPFLGWVHGAQMVAFNMQGY
Sbjct: 361 LSEQELAKVAAHHGRNIVSFTHKNLLRIYPKGTRFNSSNYNPFLGWVHGAQMVAFNMQGY 420
Query: 421 GRSLWLMHGFYKANGGCGYVKKPDFMMQTCPDGNVFDPKADLPVKKTLKVKVYMGEGWQS 480
GRSLWLMHGFYKANGGCGYVKKPDFMMQTCPDGNVFDPKADLPVKKTLKVKVYMGEGWQS
Sbjct: 421 GRSLWLMHGFYKANGGCGYVKKPDFMMQTCPDGNVFDPKADLPVKKTLKVKVYMGEGWQS 480
Query: 481 DFKQTYFDTYSPPDFYAKVGIAGVPSDSVMQKTKAVEDSWVPVWEEEFVFPLTVPEIALL 540
DFKQTYFDTYSPPDFYAKVGIAGVPSDSVMQKTKAVEDSWVPVWEEEFVFPLTVPEIALL
Sbjct: 481 DFKQTYFDTYSPPDFYAKVGIAGVPSDSVMQKTKAVEDSWVPVWEEEFVFPLTVPEIALL 540
Query: 541 RVEVHEYDVSEDDFGGQTALPVSELRPGIRTVPLFDHKGLKFKSVKLLMRFEFV 594
RVEVHEYDVSEDDFGGQTALPVSELRPGIRTVPLFDHKGLKFKSVKLLMRFEFV
Sbjct: 541 RVEVHEYDVSEDDFGGQTALPVSELRPGIRTVPLFDHKGLKFKSVKLLMRFEFV 594
>Os07g0694000 Similar to Phospholipase C (Fragment)
Length = 598
Score = 827 bits (2137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/604 (69%), Positives = 487/604 (80%), Gaps = 18/604 (2%)
Query: 1 MGTYKCCIFFTRRFALSDASTPGDVRMLFTRH-AGGAPYMGIDELRRYLAASGEAHVDAD 59
MGTYKCC+ F RRF +DA P DVR LF H AGG P+M D LR YL A+G+ D D
Sbjct: 1 MGTYKCCLIFKRRFRWNDAPPPDDVRALFANHSAGGGPHMAADGLRAYLQATGQ---DGD 57
Query: 60 T-AERIIDRV--LQERS-RTPRFGK--PSLTIDDFQYFLFSEDLNPPICHSK-EVHHDMN 112
ER+++++ LQ R R PR G+ P LT+DDF FLFS +LNPPI H + +VHHDM
Sbjct: 58 VDMERLVEQIRQLQGRGGRIPRVGRALPLLTVDDFHRFLFSHELNPPIRHGQGQVHHDMA 117
Query: 113 APLSHYFIYTGHNSYLTGNQLSSDCSDIPIIKALQIGVRVIELDMWPNSSKDDVDILHGR 172
APLSHYFIYTGHNSYLTGNQLSSDCSD+PII+ALQ GVRVIELDMWPNSSKDD+ ILHGR
Sbjct: 118 APLSHYFIYTGHNSYLTGNQLSSDCSDLPIIRALQRGVRVIELDMWPNSSKDDISILHGR 177
Query: 173 TLTAPVSLIKCLKSIKEYAFVASPYPVIITLEDHLTSDLQAKVAKMVLEVFGDTLYYPES 232
TLT PVSL+KCL SIK++AF ASPYPVIITLEDHLT DLQ K AKMVLEVFGD LYYP+
Sbjct: 178 TLTTPVSLLKCLLSIKQHAFEASPYPVIITLEDHLTPDLQDKAAKMVLEVFGDILYYPDK 237
Query: 233 KHLQEFPSPEALRGRVILSTKPPKEYLESKGGTMKDRDIEPQFSKGQNEEAVWGTEVPDI 292
HL+EFPSP+ L+GRV+LSTKPP+EYL++K G I+ ++A WG EVPDI
Sbjct: 238 DHLKEFPSPQDLKGRVLLSTKPPREYLQAKDGNAA--TIKEDAKAAATDDAAWGKEVPDI 295
Query: 293 QDEMQTADK--QHENDILYTQRDVEEDDEKKMCQHHPLEYKHLITIKAGKPKGAVVDALK 350
++ +A K Q E+D + + +E++E+KM QH +YKHLITIKAGKPKG ++DAL+
Sbjct: 296 HSQIHSATKHDQREDDDDTDEDEDDEEEEQKMQQHLAPQYKHLITIKAGKPKGTLLDALQ 355
Query: 351 GDPDKVRRLSLSEQELAKVAAHHGRNIVSFTHKNLLRIYPKGTRFNSSNYNPFLGWVHGA 410
DP+KVRRLSLSEQ+LAK+A HHG IV FT +NLLRIYPKGTR SSNYNPFLGWVHGA
Sbjct: 356 SDPEKVRRLSLSEQQLAKLADHHGTEIVRFTQRNLLRIYPKGTRVTSSNYNPFLGWVHGA 415
Query: 411 QMVAFNMQGYGRSLWLMHGFYKANGGCGYVKKPDFMMQTCPDGNVFDPKADLPVKKTLKV 470
QMVAFNMQGYGR+LWLMHGFYKANGGCGYVKKPDF+MQT P+ VFDPK L KKTLKV
Sbjct: 416 QMVAFNMQGYGRALWLMHGFYKANGGCGYVKKPDFLMQTDPE--VFDPKKSLSPKKTLKV 473
Query: 471 KVYMGEGWQSDFKQTYFDTYSPPDFYAKVGIAGVPSDSVMQKTKAVEDSWVPVWEEEFVF 530
KVYMG+GW+ DF QT+FD YSPPDFYA+VGIAGVP+DSVM++T+A+ED+WVPVWEE+F F
Sbjct: 474 KVYMGDGWRMDFTQTHFDQYSPPDFYARVGIAGVPADSVMKRTRAIEDNWVPVWEEDFTF 533
Query: 531 PLTVPEIALLRVEVHEYDVSE-DDFGGQTALPVSELRPGIRTVPLFDHKGLKFKSVKLLM 589
LTVPEIALLRVEVHEYD+SE DDFGGQT LPVS+L PGIR V L D KG+K +VKLLM
Sbjct: 534 KLTVPEIALLRVEVHEYDMSEKDDFGGQTVLPVSDLIPGIRAVALHDRKGIKLNNVKLLM 593
Query: 590 RFEF 593
RFEF
Sbjct: 594 RFEF 597
>Os05g0127200 Similar to Phospholipase C (Fragment)
Length = 598
Score = 600 bits (1547), Expect = e-171, Method: Compositional matrix adjust.
Identities = 315/614 (51%), Positives = 407/614 (66%), Gaps = 36/614 (5%)
Query: 1 MGTYKCCIFFTRRFALSDASTPGDVRMLFTRHA-GGAPYMGIDELRRYL-------AASG 52
M TY+ C F RRF + ++ +F +A GG MG + LRR+L A G
Sbjct: 1 MTTYRVCCFL-RRFRAASNEPSEELGDVFQAYADGGGGVMGEEALRRFLREVQGEAAGGG 59
Query: 53 EAHVDADTAERIIDRVLQER---SRTPRFGKPSLTIDDFQYFLFSEDLNPPICHSKEVHH 109
+ ++A TA ++ ++R LT++ F +L S D N + K V+
Sbjct: 60 DDELEA-TAREVMAFAAEQRLLRKGGAAAAGGGLTVEGFHRWLCS-DANAALDPQKRVYQ 117
Query: 110 DMNAPLSHYFIYTGHNSYLTGNQLSSDCSDIPIIKALQIGVRVIELDMWPNSSKDDVDIL 169
DM PLSHYFIYTGHNSYLTGNQLSS CS++PI+KAL GVRVIELD+WPN++KD V++L
Sbjct: 118 DMGLPLSHYFIYTGHNSYLTGNQLSSGCSEVPIVKALHDGVRVIELDLWPNAAKDAVEVL 177
Query: 170 HGRTLTAPVSLIKCLKSIKEYAFVASPYPVIITLEDHLTSDLQAKVAKMVLEVFGDTLYY 229
HGRTLT+PV L+KCL++I+EYAFVASPYPVI+TLEDHLT DLQ+KVAKM+ E FGD LY
Sbjct: 178 HGRTLTSPVGLMKCLEAIREYAFVASPYPVILTLEDHLTPDLQSKVAKMIKETFGDMLYV 237
Query: 230 PESKHLQEFPSPEALRGRVILSTKPPKEYLESKGGTMKDRDIEPQFSKGQNEEAVWGTEV 289
E++++ EFPSP+ L+G++I+STKPPKEYL++K D E VWG E+
Sbjct: 238 SETENMAEFPSPDELKGKIIVSTKPPKEYLQTKNDADAD------------EAGVWGEEI 285
Query: 290 PD-------IQDEMQTADKQHENDILYTQRDVEEDDEKKMCQHH-PLEYKHLITIKAGKP 341
D + E + A + +++E + K QH EY+ LI I +
Sbjct: 286 TDDKVAATAMTTEEKCAAAEEAVAAAAVDEEMQEAETDKKTQHGVDNEYRRLIAIPLTRR 345
Query: 342 KGAVVDALKGDPDKVRRLSLSEQELAKVAAHHGRNIVSFTHKNLLRIYPKGTRFNSSNYN 401
K + LK DPD V RLSL E+ K HG +I+ FT + LLRI+P+ TR SSNYN
Sbjct: 346 KHDMDQDLKVDPDMVTRLSLGEKAYEKAIVTHGAHIIRFTQRKLLRIFPRSTRITSSNYN 405
Query: 402 PFLGWVHGAQMVAFNMQGYGRSLWLMHGFYKANGGCGYVKKPDFMMQTCPDGNVFDPKAD 461
P +GW +G QMVA NMQG+GR LWL G ++ANGGCGYVKKPD +M PD +FDP +
Sbjct: 406 PLMGWRYGVQMVAANMQGHGRKLWLTQGMFRANGGCGYVKKPDILMNNDPD-KLFDPTSK 464
Query: 462 LPVKKTLKVKVYMGEGWQSDFKQTYFDTYSPPDFYAKVGIAGVPSDSVMQKTKAVEDSWV 521
LPVK LKV VYMG+GW+ DF++T+FD SPPDFYA+VGIAGV +D+ M++TK D+W+
Sbjct: 465 LPVKTRLKVTVYMGDGWRFDFRKTHFDKCSPPDFYARVGIAGVEADTRMEQTKVKMDTWI 524
Query: 522 PVWEEEFVFPLTVPEIALLRVEVHEYDVSE-DDFGGQTALPVSELRPGIRTVPLFDHKGL 580
P W+ EF FPL+VPE+ALLRVEVHE D + DDFGGQT LPV ELR GIR+V L DH+G
Sbjct: 525 PAWDHEFEFPLSVPELALLRVEVHESDNHQKDDFGGQTCLPVWELRRGIRSVRLCDHRGE 584
Query: 581 KFKSVKLLMRFEFV 594
+SVKLLMRF+F
Sbjct: 585 PLRSVKLLMRFDFT 598
>AK072141
Length = 617
Score = 579 bits (1493), Expect = e-165, Method: Compositional matrix adjust.
Identities = 290/521 (55%), Positives = 368/521 (70%), Gaps = 23/521 (4%)
Query: 83 LTIDDFQYFLFSEDLNPPICHSKEVHHDMNAPLSHYFIYTGHNSYLTGNQLSSDCSDIPI 142
LT++ F +L S D N + K V+ DM PLSHYFIYTGHNSYLTGNQLSS CS++PI
Sbjct: 111 LTVEGFHRWLCS-DANAALDPQKRVYQDMGLPLSHYFIYTGHNSYLTGNQLSSGCSEVPI 169
Query: 143 IKALQIGVRVIELDMWPNSSKDDVDILHGRTLTAPVSLIKCLKSIKEYAFVASPYPVIIT 202
+KAL GVRVIELD+WPN++KD V++LHGRTLT+PV L+KCL++I+EYAFVASPYPVI+T
Sbjct: 170 VKALHDGVRVIELDLWPNAAKDAVEVLHGRTLTSPVGLMKCLEAIREYAFVASPYPVILT 229
Query: 203 LEDHLTSDLQAKVAKMVLEVFGDTLYYPESKHLQEFPSPEALRGRVILSTKPPKEYLESK 262
LEDHLT DLQ+KVAKM+ E FGD LY E++++ EFPSP+ L+G++I+STKPPKEYL++K
Sbjct: 230 LEDHLTPDLQSKVAKMIKETFGDMLYVSETENMAEFPSPDELKGKIIVSTKPPKEYLQTK 289
Query: 263 GGTMKDRDIEPQFSKGQNEEAVWGTEVPD-------IQDEMQTADKQHENDILYTQRDVE 315
D E VWG E+ D + E + A + +++
Sbjct: 290 NDADAD------------EAGVWGEEITDDKVAATAMTTEEKCAAAEEAVAAAAVDEEMQ 337
Query: 316 EDDEKKMCQHH-PLEYKHLITIKAGKPKGAVVDALKGDPDKVRRLSLSEQELAKVAAHHG 374
E + K QH EY+ LI I + K + LK DPD V RLSL E+ K HG
Sbjct: 338 EAETDKKTQHGVDNEYRRLIAIPLTRRKHDMDQDLKVDPDMVTRLSLGEKAYEKAIVTHG 397
Query: 375 RNIVSFTHKNLLRIYPKGTRFNSSNYNPFLGWVHGAQMVAFNMQGYGRSLWLMHGFYKAN 434
+I+ FT + LLRI+P+ TR SS+YNP +GW +G QMVA NMQG+GR LWL G ++AN
Sbjct: 398 AHIIRFTQRKLLRIFPRSTRITSSDYNPLMGWRYGVQMVAANMQGHGRKLWLTQGMFRAN 457
Query: 435 GGCGYVKKPDFMMQTCPDGNVFDPKADLPVKKTLKVKVYMGEGWQSDFKQTYFDTYSPPD 494
GGCGYVKKPD +M PD +FDP + LPVK LKV VYMG+GW+ DF++T+FD SPPD
Sbjct: 458 GGCGYVKKPDILMNNDPD-KLFDPTSKLPVKTRLKVTVYMGDGWRFDFRKTHFDKCSPPD 516
Query: 495 FYAKVGIAGVPSDSVMQKTKAVEDSWVPVWEEEFVFPLTVPEIALLRVEVHEYDVSE-DD 553
FYA+VGIAGV +D+ M++TK D+W+P W+ EF FPL+VPE+ALLRVEVHE D + DD
Sbjct: 517 FYARVGIAGVEADTRMEQTKVKMDTWIPAWDHEFEFPLSVPELALLRVEVHESDNHQKDD 576
Query: 554 FGGQTALPVSELRPGIRTVPLFDHKGLKFKSVKLLMRFEFV 594
FGGQT LPV ELR GIR+V L DH+G +SVKLLMRF+F
Sbjct: 577 FGGQTCLPVWELRRGIRSVRLCDHRGEPLRSVKLLMRFDFT 617
>Os12g0562400 Similar to Phospholipase C (Fragment)
Length = 278
Score = 412 bits (1060), Expect = e-115, Method: Compositional matrix adjust.
Identities = 188/278 (67%), Positives = 231/278 (83%), Gaps = 1/278 (0%)
Query: 318 DEKKMCQHHPLEYKHLITIKAGKPKGAVVDALKGDPDKVRRLSLSEQELAKVAAHHGRNI 377
D+ K Q EY+ LITI AGKPKG + DALK DPDKVRRLSLSE +LAK A HG ++
Sbjct: 1 DDPKFQQETACEYRELITIHAGKPKGHLKDALKVDPDKVRRLSLSETQLAKATASHGADV 60
Query: 378 VSFTHKNLLRIYPKGTRFNSSNYNPFLGWVHGAQMVAFNMQGYGRSLWLMHGFYKANGGC 437
+ FT KN+LR+YPKGTR NSSNY+P W HGAQMVAFNMQG+ ++L LM GF++ANGGC
Sbjct: 61 IRFTQKNILRVYPKGTRINSSNYDPMNAWTHGAQMVAFNMQGHDKALRLMQGFFRANGGC 120
Query: 438 GYVKKPDFMMQTCPDGNVFDPKADLPVKKTLKVKVYMGEGWQSDFKQTYFDTYSPPDFYA 497
GYVKKPDF+++T P+G VFDP A +PVKKTLKVKVYMG+GW+ DF +T+FDT+SPPDFY
Sbjct: 121 GYVKKPDFLLRTGPNGEVFDPNASMPVKKTLKVKVYMGDGWRMDFSKTHFDTFSPPDFYT 180
Query: 498 KVGIAGVPSDSVMQKTKAVEDSWVPVWEEEFVFPLTVPEIALLRVEVHEYDVSED-DFGG 556
+VGIAGV +D VM+KT+ +ED WVP+W+EEF FPLTVPE+A+LR+EVHEYD+SE DFGG
Sbjct: 181 RVGIAGVRADCVMKKTRTIEDQWVPMWDEEFTFPLTVPELAVLRIEVHEYDMSEKHDFGG 240
Query: 557 QTALPVSELRPGIRTVPLFDHKGLKFKSVKLLMRFEFV 594
QT LPVSEL+ GIR VPL D +G ++KSV+LLMRF+F+
Sbjct: 241 QTCLPVSELKQGIRAVPLHDRRGTRYKSVRLLMRFDFL 278
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.137 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 22,267,571
Number of extensions: 1019054
Number of successful extensions: 2015
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 2001
Number of HSP's successfully gapped: 5
Length of query: 594
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 488
Effective length of database: 11,501,117
Effective search space: 5612545096
Effective search space used: 5612545096
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 159 (65.9 bits)